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The map label for this gene is yesN [H]

Identifier: 52784261

GI number: 52784261

Start: 437981

End: 439183

Strand: Direct

Name: yesN [H]

Synonym: BLi00441

Alternate gene names: 52784261

Gene position: 437981-439183 (Clockwise)

Preceding gene: 52784260

Following gene: 52784262

Centisome position: 10.37

GC content: 50.12

Gene sequence:

>1203_bases
TTGAGTGAATGTTGGCGCGTACTGATTGCCGATGATGAACCGTGGATTCGGGAAGGAATACGGGATGCCGTCTCTTGGGA
GCGCTATCAAATGTCGGTGTCGGCTGAAGCGGAGAATGGCGAGGAGGCTTTTGAGCTCGCTCTCAAACACGGTATCGACT
TATTGATTGTCGACTTGAATATGCCGATCGTAAACGGAATTGCCTTGATGAAAAAGCTCCGCGGCGCCTTGCCCCAGTGC
CGCTTTGTCATCGTGACGGGCTACGATCAGTTTGCATACGCGCAAGAAGCGATCCGGCTGAATGTTGATGATTATTTGTT
AAAGCCGGTCGATCCCGCTCATCTGGAACAAGTGCTCAAAAAGATCAGCGTGTCGCTTGCAGCTGAGAAAAAGAAGCTGA
GCGAGCAAAAGCTTGCTGAGCAGCATATTCAACAAAACCTCGGCCTTCTGAAGGAGCATGTTTTCAGAAGCTGGATCGAA
AACCGGGCAGACGAAGAAGACGTTTACCGGCAGCTCGAATGCCTCCGTCTGCCGGCGCGCAATCCTGAAACGCTCGGCGT
CATCGCGGCTGGACATGTATGGAACAAACCGTCTGAAGCCGACAATCTGAAAGAAAAAGTAGAACGTTTTTTTATTAACG
AGCGAGATAAAGCCGTATTTTTCGACGGAGACCGCCTGATCGCCGCCTGTCTGTGGCGTTCTGTTACGGAAGCCGAACAG
CGGGCGCTTGCAGAGATGATCAAAGCCGAATTGCAGGCAAGCGCAGCCGTCTGTTTTGCGAAGCTTGCTGAAAACGGCCG
CTCAGCCCCGCAATGCTATCAGCACTGCAGGCAGCAAGTGTCGAAAGCATTCAATATCTCGCCGGTTGTCATAAGGGCCA
AGGAGTATATGCAAAAGCATTTCACTGAAAGGGAGTTTTCTTTAAAACAGATGGCGGATGCGCTTCAAGTCTCGTCCGTC
TATTTGAGCAGAATGATGAAGAAGGAGCTCGGCGTGACATTTGTTCAGCTTTTGACGGAGATGCGCATGGATCAAGCGGT
TCACCTGTTAGAGACAACCCCTCTTTCAATTCATGACATTGCCGAACAAACGGGCTATGATACACAGCACTATTTCAGCA
CTGTATTTAAAAAGACGATGGGTGTATCCCCCAATCAGTACCGCCGCATGTCGGGAATTGAAAGAACAGGAGGAAAATTG
TAA

Upstream 100 bases:

>100_bases
ACATTTGGCGAGCCGTACGGTATAACGGTTGAAAGTCGGAAAGGAGCCGGAACCGCCGTCACGATACGGCTACCAATTTT
AGCAAAAGGGGGAACAAGCC

Downstream 100 bases:

>100_bases
TGTAAGCGCTTCAAAAAAGTCTGATTTTTATAAAAATAGTTAATTAATTCAAAAGACGGACATTCGAAAGACATGGTACA
GTTGGCATGATTCATGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSECWRVLIADDEPWIREGIRDAVSWERYQMSVSAEAENGEEAFELALKHGIDLLIVDLNMPIVNGIALMKKLRGALPQC
RFVIVTGYDQFAYAQEAIRLNVDDYLLKPVDPAHLEQVLKKISVSLAAEKKKLSEQKLAEQHIQQNLGLLKEHVFRSWIE
NRADEEDVYRQLECLRLPARNPETLGVIAAGHVWNKPSEADNLKEKVERFFINERDKAVFFDGDRLIAACLWRSVTEAEQ
RALAEMIKAELQASAAVCFAKLAENGRSAPQCYQHCRQQVSKAFNISPVVIRAKEYMQKHFTEREFSLKQMADALQVSSV
YLSRMMKKELGVTFVQLLTEMRMDQAVHLLETTPLSIHDIAEQTGYDTQHYFSTVFKKTMGVSPNQYRRMSGIERTGGKL

Sequences:

>Translated_400_residues
MSECWRVLIADDEPWIREGIRDAVSWERYQMSVSAEAENGEEAFELALKHGIDLLIVDLNMPIVNGIALMKKLRGALPQC
RFVIVTGYDQFAYAQEAIRLNVDDYLLKPVDPAHLEQVLKKISVSLAAEKKKLSEQKLAEQHIQQNLGLLKEHVFRSWIE
NRADEEDVYRQLECLRLPARNPETLGVIAAGHVWNKPSEADNLKEKVERFFINERDKAVFFDGDRLIAACLWRSVTEAEQ
RALAEMIKAELQASAAVCFAKLAENGRSAPQCYQHCRQQVSKAFNISPVVIRAKEYMQKHFTEREFSLKQMADALQVSSV
YLSRMMKKELGVTFVQLLTEMRMDQAVHLLETTPLSIHDIAEQTGYDTQHYFSTVFKKTMGVSPNQYRRMSGIERTGGKL
>Mature_399_residues
SECWRVLIADDEPWIREGIRDAVSWERYQMSVSAEAENGEEAFELALKHGIDLLIVDLNMPIVNGIALMKKLRGALPQCR
FVIVTGYDQFAYAQEAIRLNVDDYLLKPVDPAHLEQVLKKISVSLAAEKKKLSEQKLAEQHIQQNLGLLKEHVFRSWIEN
RADEEDVYRQLECLRLPARNPETLGVIAAGHVWNKPSEADNLKEKVERFFINERDKAVFFDGDRLIAACLWRSVTEAEQR
ALAEMIKAELQASAAVCFAKLAENGRSAPQCYQHCRQQVSKAFNISPVVIRAKEYMQKHFTEREFSLKQMADALQVSSVY
LSRMMKKELGVTFVQLLTEMRMDQAVHLLETTPLSIHDIAEQTGYDTQHYFSTVFKKTMGVSPNQYRRMSGIERTGGKL

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786251, Length=99, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789993, Length=101, Percent_Identity=33.6633663366337, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87082052, Length=119, Percent_Identity=34.453781512605, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788550, Length=147, Percent_Identity=27.2108843537415, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 45768; Mature: 45637

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSECWRVLIADDEPWIREGIRDAVSWERYQMSVSAEAENGEEAFELALKHGIDLLIVDLN
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCEEEEEECC
MPIVNGIALMKKLRGALPQCRFVIVTGYDQFAYAQEAIRLNVDDYLLKPVDPAHLEQVLK
CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHH
KISVSLAAEKKKLSEQKLAEQHIQQNLGLLKEHVFRSWIENRADEEDVYRQLECLRLPAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
NPETLGVIAAGHVWNKPSEADNLKEKVERFFINERDKAVFFDGDRLIAACLWRSVTEAEQ
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHH
RALAEMIKAELQASAAVCFAKLAENGRSAPQCYQHCRQQVSKAFNISPVVIRAKEYMQKH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FTEREFSLKQMADALQVSSVYLSRMMKKELGVTFVQLLTEMRMDQAVHLLETTPLSIHDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AEQTGYDTQHYFSTVFKKTMGVSPNQYRRMSGIERTGGKL
HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SECWRVLIADDEPWIREGIRDAVSWERYQMSVSAEAENGEEAFELALKHGIDLLIVDLN
CCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCEEEEEECC
MPIVNGIALMKKLRGALPQCRFVIVTGYDQFAYAQEAIRLNVDDYLLKPVDPAHLEQVLK
CCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHH
KISVSLAAEKKKLSEQKLAEQHIQQNLGLLKEHVFRSWIENRADEEDVYRQLECLRLPAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
NPETLGVIAAGHVWNKPSEADNLKEKVERFFINERDKAVFFDGDRLIAACLWRSVTEAEQ
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHH
RALAEMIKAELQASAAVCFAKLAENGRSAPQCYQHCRQQVSKAFNISPVVIRAKEYMQKH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FTEREFSLKQMADALQVSSVYLSRMMKKELGVTFVQLLTEMRMDQAVHLLETTPLSIHDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AEQTGYDTQHYFSTVFKKTMGVSPNQYRRMSGIERTGGKL
HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]