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The map label for this gene is tsr [C]

Identifier: 52784237

GI number: 52784237

Start: 415451

End: 417175

Strand: Direct

Name: tsr [C]

Synonym: BLi00417

Alternate gene names: 52784237

Gene position: 415451-417175 (Clockwise)

Preceding gene: 52784236

Following gene: 52784242

Centisome position: 9.84

GC content: 47.88

Gene sequence:

>1725_bases
ATGAAAACGTTGAAGAAAAAGCTAACAGAACACATTTCAGTCAAAATTATGATTGGCGTCGCCTTAGTGCTTTTAATCAC
GATCGCATCATTTTCAGCCGTGTTTACTTTTATCAGCAAAGACTTGTCAGAGCAGCTGAAACAGCAGTTCCAAAACCGCC
TTTATACCGATATTCATCTTGCTGAAAATCAAATCAAACGTCTGGACGGGAATCCGCTTGAGATCGATTCCGCAGACGGT
CCGCTTTACAAGCAGACAAAAATGGCTGTGGACAGCCTGAAAAAGAAAAACAAACTTGAGAATATTTATATCCTTTCCAA
TGAAGGCGGGAAGGAGCGGATTCTCGTGCTGTCGGATACGCCCGATGATTTCGGCACGGATTACAGCTTTTCTCCTGAAA
TGAAAGAAGCCTTGACGACAAACAAAGAGACGGTAAGCGACGTGTATGAGGACGAATACGGCATCCACCAGTCGATTTTT
CTGCCGCTTGAGAACGGCTCAGGAGAAAAGGTGGGAATTTTGGGGATCGACCTTGATGCTTCCGTGATTCCGGAGACAGC
GGCAAAAGCGAAATGGTATACAATTGCGATCTCAGCATTTGTCTTGCTGCTCGGAATGGTCATGGCCTATTTTCTCGGTT
CTTACATCGCGAAGCCGATCAGGCAGCTGATGAAGGCTTCAGAAAAAATTGCCGACGGCGATCTATCGGCCGACATTTCT
GTCAAGAGCCGGGACGAAGCAGGAAAGCTTGCCGAATCGTTCAAGCGGATGAGCGAAAATTTACAACAATTGATTGGACA
TATTTCAGCTTCCTCTGAAGAGGTATCCAAGACGAGCCTGCAGCTGAAAAATGTATCGGCTGAATCGAGCGAAAGCGCAG
CTCAAGTGGCTGAATCGATGAACAGCATGAGCGAGGGAATCAACGAGGTTGTCTCTTCAGTTTCGGATTGTCATACATCG
GCTGCCGAAATCGATCAGCAGCTTACACATGTCACAGAAAAAGTGAACGAGATGAAGAACGTTGCCGAGGGCGTCAGCAA
GGATTCCAAGACGGGGCAGGAGCTTGTCGAAGAAACATTGCGGCAGACCCAGACGATTAAAAACGTGATGGAAGAGTCAA
AACAAGCGGCATCAGAGATGCAAAACCATACAGAAGAAATTGAAAAAGTCATCGGAATGATTTCCTCTATTGCTGAACAG
ACGAATTTGCTGGCGCTCAATGCTTCCATTGAAGCCGCCCGGGTCGGTGAGGAAGGCCAGGGCTTTGCGGTTGTTGCCGG
AGAAGTCAGAAAGCTTTCTGAACGTTCGGCAGATGCCGCTTTATCCGTTTCCCAGCTTGTGGCGGGCACGCAGGAGAGCA
GCCGGCTTGTCATGGAACGCATTCAGGAAGGAAACGAAGCGGTTGACAAAGGGCAGATTTTAATCAATGGCACATACGAG
AATTTTTCAGGAATTTTTAAAGGAATTTCTCAATTCGCCGAACGCACAGATCAATTGCTTCAGTCCTTGTTAAAAGTCGA
AAAATCGTATCAAACCATTTCGTCTGCGATGGAGCAGATTTCCGCCGTTACCGAAGAGCAGGCGGCAGGCTCTGAAGAAG
TCGCTGCGGCAGCGGAGCAGCAAAGCGCCGGCATGCAGGAAATCGCATCGGCCATTCAGCAGCTCTCCGCTTTGTCGGAA
GAATTGAATCAGGCGGCATCCAAGTTTAAACTGGCCGCTGAATAA

Upstream 100 bases:

>100_bases
CTGAACATGTCCCGGGAATTATCGATTATTTAAAAGAAACTATTGAGGAAGTCTTCCGGGAGCATGGGTCTCTCATGACA
AATTAAAGGGGATATAGACG

Downstream 100 bases:

>100_bases
AAAGAACAGCCTGATCTCTCTTGATCAGGCTGTTTTGTTTATACAGGATTCAAAATCCGGTTTAAAAACTGTTTTGTTCG
TTCTTCCTTAGGGGCTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MKTLKKKLTEHISVKIMIGVALVLLITIASFSAVFTFISKDLSEQLKQQFQNRLYTDIHLAENQIKRLDGNPLEIDSADG
PLYKQTKMAVDSLKKKNKLENIYILSNEGGKERILVLSDTPDDFGTDYSFSPEMKEALTTNKETVSDVYEDEYGIHQSIF
LPLENGSGEKVGILGIDLDASVIPETAAKAKWYTIAISAFVLLLGMVMAYFLGSYIAKPIRQLMKASEKIADGDLSADIS
VKSRDEAGKLAESFKRMSENLQQLIGHISASSEEVSKTSLQLKNVSAESSESAAQVAESMNSMSEGINEVVSSVSDCHTS
AAEIDQQLTHVTEKVNEMKNVAEGVSKDSKTGQELVEETLRQTQTIKNVMEESKQAASEMQNHTEEIEKVIGMISSIAEQ
TNLLALNASIEAARVGEEGQGFAVVAGEVRKLSERSADAALSVSQLVAGTQESSRLVMERIQEGNEAVDKGQILINGTYE
NFSGIFKGISQFAERTDQLLQSLLKVEKSYQTISSAMEQISAVTEEQAAGSEEVAAAAEQQSAGMQEIASAIQQLSALSE
ELNQAASKFKLAAE

Sequences:

>Translated_574_residues
MKTLKKKLTEHISVKIMIGVALVLLITIASFSAVFTFISKDLSEQLKQQFQNRLYTDIHLAENQIKRLDGNPLEIDSADG
PLYKQTKMAVDSLKKKNKLENIYILSNEGGKERILVLSDTPDDFGTDYSFSPEMKEALTTNKETVSDVYEDEYGIHQSIF
LPLENGSGEKVGILGIDLDASVIPETAAKAKWYTIAISAFVLLLGMVMAYFLGSYIAKPIRQLMKASEKIADGDLSADIS
VKSRDEAGKLAESFKRMSENLQQLIGHISASSEEVSKTSLQLKNVSAESSESAAQVAESMNSMSEGINEVVSSVSDCHTS
AAEIDQQLTHVTEKVNEMKNVAEGVSKDSKTGQELVEETLRQTQTIKNVMEESKQAASEMQNHTEEIEKVIGMISSIAEQ
TNLLALNASIEAARVGEEGQGFAVVAGEVRKLSERSADAALSVSQLVAGTQESSRLVMERIQEGNEAVDKGQILINGTYE
NFSGIFKGISQFAERTDQLLQSLLKVEKSYQTISSAMEQISAVTEEQAAGSEEVAAAAEQQSAGMQEIASAIQQLSALSE
ELNQAASKFKLAAE
>Mature_574_residues
MKTLKKKLTEHISVKIMIGVALVLLITIASFSAVFTFISKDLSEQLKQQFQNRLYTDIHLAENQIKRLDGNPLEIDSADG
PLYKQTKMAVDSLKKKNKLENIYILSNEGGKERILVLSDTPDDFGTDYSFSPEMKEALTTNKETVSDVYEDEYGIHQSIF
LPLENGSGEKVGILGIDLDASVIPETAAKAKWYTIAISAFVLLLGMVMAYFLGSYIAKPIRQLMKASEKIADGDLSADIS
VKSRDEAGKLAESFKRMSENLQQLIGHISASSEEVSKTSLQLKNVSAESSESAAQVAESMNSMSEGINEVVSSVSDCHTS
AAEIDQQLTHVTEKVNEMKNVAEGVSKDSKTGQELVEETLRQTQTIKNVMEESKQAASEMQNHTEEIEKVIGMISSIAEQ
TNLLALNASIEAARVGEEGQGFAVVAGEVRKLSERSADAALSVSQLVAGTQESSRLVMERIQEGNEAVDKGQILINGTYE
NFSGIFKGISQFAERTDQLLQSLLKVEKSYQTISSAMEQISAVTEEQAAGSEEVAAAAEQQSAGMQEIASAIQQLSALSE
ELNQAASKFKLAAE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=262, Percent_Identity=29.0076335877863, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1787690, Length=360, Percent_Identity=28.3333333333333, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788195, Length=371, Percent_Identity=25.0673854447439, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788194, Length=385, Percent_Identity=26.2337662337662, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1789453, Length=347, Percent_Identity=24.7838616714697, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62428; Mature: 62428

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLKKKLTEHISVKIMIGVALVLLITIASFSAVFTFISKDLSEQLKQQFQNRLYTDIHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AENQIKRLDGNPLEIDSADGPLYKQTKMAVDSLKKKNKLENIYILSNEGGKERILVLSDT
HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECC
PDDFGTDYSFSPEMKEALTTNKETVSDVYEDEYGIHQSIFLPLENGSGEKVGILGIDLDA
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCC
SVIPETAAKAKWYTIAISAFVLLLGMVMAYFLGSYIAKPIRQLMKASEKIADGDLSADIS
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
VKSRDEAGKLAESFKRMSENLQQLIGHISASSEEVSKTSLQLKNVSAESSESAAQVAESM
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
NSMSEGINEVVSSVSDCHTSAAEIDQQLTHVTEKVNEMKNVAEGVSKDSKTGQELVEETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RQTQTIKNVMEESKQAASEMQNHTEEIEKVIGMISSIAEQTNLLALNASIEAARVGEEGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCCCC
GFAVVAGEVRKLSERSADAALSVSQLVAGTQESSRLVMERIQEGNEAVDKGQILINGTYE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCEEEECCHH
NFSGIFKGISQFAERTDQLLQSLLKVEKSYQTISSAMEQISAVTEEQAAGSEEVAAAAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QSAGMQEIASAIQQLSALSEELNQAASKFKLAAE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTLKKKLTEHISVKIMIGVALVLLITIASFSAVFTFISKDLSEQLKQQFQNRLYTDIHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AENQIKRLDGNPLEIDSADGPLYKQTKMAVDSLKKKNKLENIYILSNEGGKERILVLSDT
HHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECC
PDDFGTDYSFSPEMKEALTTNKETVSDVYEDEYGIHQSIFLPLENGSGEKVGILGIDLDA
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCC
SVIPETAAKAKWYTIAISAFVLLLGMVMAYFLGSYIAKPIRQLMKASEKIADGDLSADIS
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
VKSRDEAGKLAESFKRMSENLQQLIGHISASSEEVSKTSLQLKNVSAESSESAAQVAESM
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
NSMSEGINEVVSSVSDCHTSAAEIDQQLTHVTEKVNEMKNVAEGVSKDSKTGQELVEETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RQTQTIKNVMEESKQAASEMQNHTEEIEKVIGMISSIAEQTNLLALNASIEAARVGEEGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCCCC
GFAVVAGEVRKLSERSADAALSVSQLVAGTQESSRLVMERIQEGNEAVDKGQILINGTYE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCEEEECCHH
NFSGIFKGISQFAERTDQLLQSLLKVEKSYQTISSAMEQISAVTEEQAAGSEEVAAAAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QSAGMQEIASAIQQLSALSEELNQAASKFKLAAE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA