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The map label for this gene is skgA [H]

Identifier: 52784186

GI number: 52784186

Start: 339786

End: 340526

Strand: Direct

Name: skgA [H]

Synonym: BLi00364

Alternate gene names: 52784186

Gene position: 339786-340526 (Clockwise)

Preceding gene: 52784184

Following gene: 52784188

Centisome position: 8.05

GC content: 45.48

Gene sequence:

>741_bases
ATGGTGAAAGAGGAACTGACAACCGGGCGGGTGGCGAAGATGATGGGGATATCCGTAAGGACGCTCCGCTACTACGATCA
AATCGGTTTATTAAAACCGGGCTCTACACTGCCGAATGGGCGAAGGCAATATTCGAAGGAAGATTTGTTAGAGCTCGAAA
AAATTATGATCTTGAAATCTGCTCAATTTTCATTGGAGCATATCAAGACGTTAATGAATCAATTGGATACAATTAGTATC
ATCGAAATGCATAAAAGGCGCCTTAATTCGGAGATCGAACAGCTGACGAAGAGCCTGGAGCATACAAATACTTTGCTGAA
CATGTATCAAATCGAAGGAAGCTTGAGCTGGGAAGACCTTCTCAAGCTCGTCAGACAGCCCCGGCATAAACCATGGAAGG
AATCATTCTCTGAAGAGGAGGCTGAGATTTTAGCAGAAAGGCTTCCGAAGGCGGAGAGTGACGATTTCATCACAAAGCAA
TGGCTCTCTATCATCAAGCGGATTAAGCTGTGTTTAAAACAAGAGGTGCCGCCTGAATCTGAATGGGGAAAGCAAATTGC
GGAGGATATCATATGCCTGTCTGATCATTCGTTTAAGGGACATGAGGATTTAGCCGATCGATTCTGGGAGGTTCGCAAGT
CTGAGGAGCCAAACGGGCTTTATCCGCTTGACAGCGGGATTATGGAATTTGCGGAGAGAGCGATTGAATCTGCATTTCAT
GATTCAGGAGGATCAGGGTGA

Upstream 100 bases:

>100_bases
GGATTTTTCCATTCCATCACAAAACCCTCCTGTTTTTAAGATAAAATCATTTTAAATGGTGACGTAACGTAATCTTCAAG
CAATATTTTAGGAGGGAGAT

Downstream 100 bases:

>100_bases
TGATGAGCATCCAATTGTCATGATCGGGCCGGATAACCAAAAGATCAAACAGGATATGCCGCATAGAAAACCGCCCGAAA
AGAATCGAGCGGCTACCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Stationary-phase regulation of katG protein [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MVKEELTTGRVAKMMGISVRTLRYYDQIGLLKPGSTLPNGRRQYSKEDLLELEKIMILKSAQFSLEHIKTLMNQLDTISI
IEMHKRRLNSEIEQLTKSLEHTNTLLNMYQIEGSLSWEDLLKLVRQPRHKPWKESFSEEEAEILAERLPKAESDDFITKQ
WLSIIKRIKLCLKQEVPPESEWGKQIAEDIICLSDHSFKGHEDLADRFWEVRKSEEPNGLYPLDSGIMEFAERAIESAFH
DSGGSG

Sequences:

>Translated_246_residues
MVKEELTTGRVAKMMGISVRTLRYYDQIGLLKPGSTLPNGRRQYSKEDLLELEKIMILKSAQFSLEHIKTLMNQLDTISI
IEMHKRRLNSEIEQLTKSLEHTNTLLNMYQIEGSLSWEDLLKLVRQPRHKPWKESFSEEEAEILAERLPKAESDDFITKQ
WLSIIKRIKLCLKQEVPPESEWGKQIAEDIICLSDHSFKGHEDLADRFWEVRKSEEPNGLYPLDSGIMEFAERAIESAFH
DSGGSG
>Mature_246_residues
MVKEELTTGRVAKMMGISVRTLRYYDQIGLLKPGSTLPNGRRQYSKEDLLELEKIMILKSAQFSLEHIKTLMNQLDTISI
IEMHKRRLNSEIEQLTKSLEHTNTLLNMYQIEGSLSWEDLLKLVRQPRHKPWKESFSEEEAEILAERLPKAESDDFITKQ
WLSIIKRIKLCLKQEVPPESEWGKQIAEDIICLSDHSFKGHEDLADRFWEVRKSEEPNGLYPLDSGIMEFAERAIESAFH
DSGGSG

Specific function: Regulates the induction of katG (catalase-peroxidase) in stationary phase [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925 [H]

Pfam domain/function: PF00376 MerR; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 28488; Mature: 28488

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKEELTTGRVAKMMGISVRTLRYYDQIGLLKPGSTLPNGRRQYSKEDLLELEKIMILKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
AQFSLEHIKTLMNQLDTISIIEMHKRRLNSEIEQLTKSLEHTNTLLNMYQIEGSLSWEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LKLVRQPRHKPWKESFSEEEAEILAERLPKAESDDFITKQWLSIIKRIKLCLKQEVPPES
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
EWGKQIAEDIICLSDHSFKGHEDLADRFWEVRKSEEPNGLYPLDSGIMEFAERAIESAFH
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DSGGSG
CCCCCC
>Mature Secondary Structure
MVKEELTTGRVAKMMGISVRTLRYYDQIGLLKPGSTLPNGRRQYSKEDLLELEKIMILKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
AQFSLEHIKTLMNQLDTISIIEMHKRRLNSEIEQLTKSLEHTNTLLNMYQIEGSLSWEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LKLVRQPRHKPWKESFSEEEAEILAERLPKAESDDFITKQWLSIIKRIKLCLKQEVPPES
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
EWGKQIAEDIICLSDHSFKGHEDLADRFWEVRKSEEPNGLYPLDSGIMEFAERAIESAFH
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DSGGSG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10498730 [H]