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The map label for this gene is 52784172

Identifier: 52784172

GI number: 52784172

Start: 327105

End: 327692

Strand: Direct

Name: 52784172

Synonym: BLi00350

Alternate gene names: NA

Gene position: 327105-327692 (Clockwise)

Preceding gene: 52784169

Following gene: 52784173

Centisome position: 7.75

GC content: 37.93

Gene sequence:

>588_bases
ATGAACGGATTTGAAAAAAGGGCTTTGCTGATTAAGGAGAAGATCAAAAAGACGGCTTTGGATATGCTCAAAACATGGGA
GCCAAAGCGCATCCGGATAACCGATATCGCAAAAGAGGCAAACGTTTCGCAGGTGACGATTTATAATTACTTTGGAAGCA
AAGAAGCGCTCCTGAAAGAGGTTTTTAAAGATTATATCGATCAGTCCATCAGCGAGTTTGAAGAATATATGAACAAAGAT
ATTTCTGTTAAAGAAAAAATTGAATTGATGATTTTGCAAAAAAGGGCAGCCAATAATCAAAAATTCGCTTTAACGGTCAT
CAAAGAGGTGATGATCGAAGACAGTGAAATTATGGATTATGTGAAGCAGCAATACGATGAAAAAATCATTCCCCTTATGC
TCCAAATGATTGAAGAAGGTCATCGGACAGGCGAAATCTCTTCCAAAATCACCGCGGAAAGCTTTCTCATCTTTATGAAT
ATGATCATTGAACATTCAAAAACATTGGGTAAAGCCTTTGAAAAAAACAGGAAGTTTACAGAGGAAATGCTGCACATTTT
CTTCTATGGCTTGTGCGGCAGACCGTAG

Upstream 100 bases:

>100_bases
ATAATTTATTTTAAGTTCTTATGAACTTTTTTGTCAATGAAAATTAATGAAATATATTTATGTTATAATTTCATTAAGAA
AGATAAGTAAGGATGGTTAT

Downstream 100 bases:

>100_bases
TGATAAATTTGACATCTCTGTCATTTCTGTGAACGCTTGAAACAATTTCCTTGCTTTTCCGTATATAAGGCAGATACAAA
AAACGAAAGGATTTACTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNGFEKRALLIKEKIKKTALDMLKTWEPKRIRITDIAKEANVSQVTIYNYFGSKEALLKEVFKDYIDQSISEFEEYMNKD
ISVKEKIELMILQKRAANNQKFALTVIKEVMIEDSEIMDYVKQQYDEKIIPLMLQMIEEGHRTGEISSKITAESFLIFMN
MIIEHSKTLGKAFEKNRKFTEEMLHIFFYGLCGRP

Sequences:

>Translated_195_residues
MNGFEKRALLIKEKIKKTALDMLKTWEPKRIRITDIAKEANVSQVTIYNYFGSKEALLKEVFKDYIDQSISEFEEYMNKD
ISVKEKIELMILQKRAANNQKFALTVIKEVMIEDSEIMDYVKQQYDEKIIPLMLQMIEEGHRTGEISSKITAESFLIFMN
MIIEHSKTLGKAFEKNRKFTEEMLHIFFYGLCGRP
>Mature_195_residues
MNGFEKRALLIKEKIKKTALDMLKTWEPKRIRITDIAKEANVSQVTIYNYFGSKEALLKEVFKDYIDQSISEFEEYMNKD
ISVKEKIELMILQKRAANNQKFALTVIKEVMIEDSEIMDYVKQQYDEKIIPLMLQMIEEGHRTGEISSKITAESFLIFMN
MIIEHSKTLGKAFEKNRKFTEEMLHIFFYGLCGRP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22969; Mature: 22969

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFEKRALLIKEKIKKTALDMLKTWEPKRIRITDIAKEANVSQVTIYNYFGSKEALLKE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCEEEEEEHHCCHHHHHHH
VFKDYIDQSISEFEEYMNKDISVKEKIELMILQKRAANNQKFALTVIKEVMIEDSEIMDY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
VKQQYDEKIIPLMLQMIEEGHRTGEISSKITAESFLIFMNMIIEHSKTLGKAFEKNRKFT
HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMLHIFFYGLCGRP
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MNGFEKRALLIKEKIKKTALDMLKTWEPKRIRITDIAKEANVSQVTIYNYFGSKEALLKE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCEEEEEEHHCCHHHHHHH
VFKDYIDQSISEFEEYMNKDISVKEKIELMILQKRAANNQKFALTVIKEVMIEDSEIMDY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
VKQQYDEKIIPLMLQMIEEGHRTGEISSKITAESFLIFMNMIIEHSKTLGKAFEKNRKFT
HHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMLHIFFYGLCGRP
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA