Click here to switch to the map view.

The map label for this gene is ycbK [H]

Identifier: 52784132

GI number: 52784132

Start: 282149

End: 283093

Strand: Direct

Name: ycbK [H]

Synonym: BLi00309

Alternate gene names: 52784132

Gene position: 282149-283093 (Clockwise)

Preceding gene: 52784131

Following gene: 52784134

Centisome position: 6.68

GC content: 49.1

Gene sequence:

>945_bases
TTGAGTCGAGCAGAGAAGAGTACAGCTGAGCAGAGCGGCCATATTCAACACGGTGTTCGAAAAGCGGCCGGGGTCGTTTT
TATGGTCTTTGGGACGATGTGTTTTGCTTCAAAATCCATTTTTGTCAAATGGGCTTATGAACAAGGTGCACAGCCGGAAG
CGGTGCTGTTGTACCGGCAATTATTTGCGGCGCCGCTGTTTTGGCTGATTTTTATTGTGTATCGCTCAAAGCTTCCGGCT
AAGCCTGAAAAAGCGGAGATTTTTAAAGCTTGTGCGGCCGGATTGCTTTGTTTTTTTCTATCGCCATTGCTTGATTTTAT
CGGCCTTCACGGTGTTTCTGCAACCGTTGAACGGATGATTGTGATGAGCTACCCCATGTTCGTATTGATCATAACCGCCT
TTGTAAATAAAAAAATGGTCTCGGGTAAAACGTTTGCTGCCATCTTGCTTGTGAATGCCGGGCTGTTTTTGGCTGTCGGC
GGATGGGATGTGCAAGCATTGGAAGCGAACCTGTCAGGGGCTTTTTTGATCCTATTGTCCGCTGTCGCTTATGCGGCCTA
TCTTGTTGTGGCGGGAGGACTTGTCCGTCAAATCGGAGGGATTCGAATGAATGCCTATGGAATGTCGGCAGCAAGTCTTG
CGATGGCCGGTTATGCGCTGCTTCGCTCGCTGAGAGAACAACCGGGAATCGTGCTTTCTTATCCTCCCGCAATGTATGGT
TTTTTTATGATCATTGCGGCGGTGACGACGGTCATTCCTTTTTTATTCATGCTGGAAGGCATGAAGCGGATAGGAGCGGA
ACGAGGGGCCGTCATTTCCATGATCGGCCCCGTCCTCACCATCTTCGGAGGTGTTTTGTTTTTAAACGAACGTTTAACTC
CCGTTCAGTGGCTGGGGTGCTTGCTAGTGCACCTGACGGTTAGTCTGCTGGAATACCGGAAATAG

Upstream 100 bases:

>100_bases
AAATGTTCGGGAAAAGGCGTGATTTTGACGGCGCAGGGCAGCACATTGCTCCATTTTATAAAAAAACATCTCAACGAATA
AAAAGGACGGGTGTTTAGAG

Downstream 100 bases:

>100_bases
AGAAAGGGATTCATATCCCTTTTTATTTCTGTTTAAATGAATAAAGGTGGTTTACTCAGTGTCGGACGTTTTCATGACAT
ATGTTCTAGCCGCGAAATCG

Product: YcbK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSRAEKSTAEQSGHIQHGVRKAAGVVFMVFGTMCFASKSIFVKWAYEQGAQPEAVLLYRQLFAAPLFWLIFIVYRSKLPA
KPEKAEIFKACAAGLLCFFLSPLLDFIGLHGVSATVERMIVMSYPMFVLIITAFVNKKMVSGKTFAAILLVNAGLFLAVG
GWDVQALEANLSGAFLILLSAVAYAAYLVVAGGLVRQIGGIRMNAYGMSAASLAMAGYALLRSLREQPGIVLSYPPAMYG
FFMIIAAVTTVIPFLFMLEGMKRIGAERGAVISMIGPVLTIFGGVLFLNERLTPVQWLGCLLVHLTVSLLEYRK

Sequences:

>Translated_314_residues
MSRAEKSTAEQSGHIQHGVRKAAGVVFMVFGTMCFASKSIFVKWAYEQGAQPEAVLLYRQLFAAPLFWLIFIVYRSKLPA
KPEKAEIFKACAAGLLCFFLSPLLDFIGLHGVSATVERMIVMSYPMFVLIITAFVNKKMVSGKTFAAILLVNAGLFLAVG
GWDVQALEANLSGAFLILLSAVAYAAYLVVAGGLVRQIGGIRMNAYGMSAASLAMAGYALLRSLREQPGIVLSYPPAMYG
FFMIIAAVTTVIPFLFMLEGMKRIGAERGAVISMIGPVLTIFGGVLFLNERLTPVQWLGCLLVHLTVSLLEYRK
>Mature_313_residues
SRAEKSTAEQSGHIQHGVRKAAGVVFMVFGTMCFASKSIFVKWAYEQGAQPEAVLLYRQLFAAPLFWLIFIVYRSKLPAK
PEKAEIFKACAAGLLCFFLSPLLDFIGLHGVSATVERMIVMSYPMFVLIITAFVNKKMVSGKTFAAILLVNAGLFLAVGG
WDVQALEANLSGAFLILLSAVAYAAYLVVAGGLVRQIGGIRMNAYGMSAASLAMAGYALLRSLREQPGIVLSYPPAMYGF
FMIIAAVTTVIPFLFMLEGMKRIGAERGAVISMIGPVLTIFGGVLFLNERLTPVQWLGCLLVHLTVSLLEYRK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34129; Mature: 33998

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAEKSTAEQSGHIQHGVRKAAGVVFMVFGTMCFASKSIFVKWAYEQGAQPEAVLLYRQ
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHH
LFAAPLFWLIFIVYRSKLPAKPEKAEIFKACAAGLLCFFLSPLLDFIGLHGVSATVERMI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VMSYPMFVLIITAFVNKKMVSGKTFAAILLVNAGLFLAVGGWDVQALEANLSGAFLILLS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCHHHHHHCCCHHHHHHHH
AVAYAAYLVVAGGLVRQIGGIRMNAYGMSAASLAMAGYALLRSLREQPGIVLSYPPAMYG
HHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
FFMIIAAVTTVIPFLFMLEGMKRIGAERGAVISMIGPVLTIFGGVLFLNERLTPVQWLGC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLVHLTVSLLEYRK
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SRAEKSTAEQSGHIQHGVRKAAGVVFMVFGTMCFASKSIFVKWAYEQGAQPEAVLLYRQ
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHH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HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]