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The map label for this gene is yccF [H]

Identifier: 52784134

GI number: 52784134

Start: 283751

End: 284818

Strand: Direct

Name: yccF [H]

Synonym: BLi00311

Alternate gene names: 52784134

Gene position: 283751-284818 (Clockwise)

Preceding gene: 52784132

Following gene: 52784135

Centisome position: 6.72

GC content: 46.07

Gene sequence:

>1068_bases
GTGGGAAAAGTAAAAAGAAATATGCCTTGCCCCTGCGGCAGCGGGCTGAAATATAAAAAATGCTGCGGCAAAGCAGAGGG
AGCGTTTCCGGCTGTCGCGGTGCAAGAATTGAAACAAATCCAGAAAGACGTCATGGAATTCGCTTTTACGGAACATAAAG
ACACAATCGATCAATTTCTCAATCAGTATTCTTTTCTGTCAGACCTGGATCAGTCTGCGCAAAAGATATGTGTTTTTAAC
CTGGGCGTGTGGGGAGTATTTGCCCGCCCGCTGGCAGATGGAGGATTGACGATTTTTGAAGACTTTTTACAGAAAAAAGG
ATCTTCGATTCTCAGATCGCAGACAAAGGAAGCCGTTCAATCGTGGAAAGACCTCTCCCCTGCGTTGCTGCGTGTGAAAC
ATATAACAGATGGCGGCATTCGCTTTGAGGATGCTGTAACGAATGAAGAGCTGACCGTGAGGATGAATGTGAAACGGGAA
GGGCCTTTTGTAGGCGAGTACGTGCTCGGCTTTCCGATCAAGATCGGAAGCCATACCGAGTTCTTCTTGCAATTCACCAT
CTATCCTGCAAAAATGGCGGATGCTCTCAAAGACAGGCTAAGCGAGGCTTTGAACCGTTTTACAGAAGAAGGCGGGACGA
AAGAGCAGCTGATGAGAGAGGATTTCCATCATGTGTTAATGCATCTTTGCCGGCAGGAAGAGAGTACACCGTCTGAACAA
GTGTCCGAAGACATCGAATGGGCCAATGAGATGGAAAAAGAAACAGCGCTCGTTTTTGAGAAAGGTATGCTTGACGAAGG
ACATTCTGAACCATTTGTGTCCTGGGCGGTCGGCCTTTGGAAATCGTATTGTGCCAAAAAAGCACCGGTCATCAAAAAAA
CAGAAGCCTTTGCAGCTGCTTTGGAGTATTTTATCAATACGATCTCCAAATCGGAAAAATCGATATCCCAAGCAAAGCTT
GCAAAAAAATACGGCGTCAGCGCTTCGACCGTATCGAATCGTTTTAAAGATATTGAAGCCGTCCTGCAGGATGAACTTGA
CCATCATCTTGAGCTTATGCCATCTTAA

Upstream 100 bases:

>100_bases
CTTTTCAGCTAAATCATACTGATTTTCATTATCGGATTTCCCCCTCCTGAAAGTTTTGATAAAATAAATAAGTTGTAGTA
TAAGATACGGAGGTTTAAAC

Downstream 100 bases:

>100_bases
AAAAGCTCACACAACTGCTAAACCTTCCGGGGAACCGGAAGGTTTTTTGCGTTTGATTCTGATTAAATCTTGAGAAAGAT
ATTTTAAGATATCGGTACGA

Product: YccF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MGKVKRNMPCPCGSGLKYKKCCGKAEGAFPAVAVQELKQIQKDVMEFAFTEHKDTIDQFLNQYSFLSDLDQSAQKICVFN
LGVWGVFARPLADGGLTIFEDFLQKKGSSILRSQTKEAVQSWKDLSPALLRVKHITDGGIRFEDAVTNEELTVRMNVKRE
GPFVGEYVLGFPIKIGSHTEFFLQFTIYPAKMADALKDRLSEALNRFTEEGGTKEQLMREDFHHVLMHLCRQEESTPSEQ
VSEDIEWANEMEKETALVFEKGMLDEGHSEPFVSWAVGLWKSYCAKKAPVIKKTEAFAAALEYFINTISKSEKSISQAKL
AKKYGVSASTVSNRFKDIEAVLQDELDHHLELMPS

Sequences:

>Translated_355_residues
MGKVKRNMPCPCGSGLKYKKCCGKAEGAFPAVAVQELKQIQKDVMEFAFTEHKDTIDQFLNQYSFLSDLDQSAQKICVFN
LGVWGVFARPLADGGLTIFEDFLQKKGSSILRSQTKEAVQSWKDLSPALLRVKHITDGGIRFEDAVTNEELTVRMNVKRE
GPFVGEYVLGFPIKIGSHTEFFLQFTIYPAKMADALKDRLSEALNRFTEEGGTKEQLMREDFHHVLMHLCRQEESTPSEQ
VSEDIEWANEMEKETALVFEKGMLDEGHSEPFVSWAVGLWKSYCAKKAPVIKKTEAFAAALEYFINTISKSEKSISQAKL
AKKYGVSASTVSNRFKDIEAVLQDELDHHLELMPS
>Mature_354_residues
GKVKRNMPCPCGSGLKYKKCCGKAEGAFPAVAVQELKQIQKDVMEFAFTEHKDTIDQFLNQYSFLSDLDQSAQKICVFNL
GVWGVFARPLADGGLTIFEDFLQKKGSSILRSQTKEAVQSWKDLSPALLRVKHITDGGIRFEDAVTNEELTVRMNVKREG
PFVGEYVLGFPIKIGSHTEFFLQFTIYPAKMADALKDRLSEALNRFTEEGGTKEQLMREDFHHVLMHLCRQEESTPSEQV
SEDIEWANEMEKETALVFEKGMLDEGHSEPFVSWAVGLWKSYCAKKAPVIKKTEAFAAALEYFINTISKSEKSISQAKLA
KKYGVSASTVSNRFKDIEAVLQDELDHHLELMPS

Specific function: Unknown

COG id: COG3318

COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011028
- InterPro:   IPR013763
- InterPro:   IPR007889
- InterPro:   IPR004027 [H]

Pfam domain/function: PF05225 HTH_psq; PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 40044; Mature: 39913

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVKRNMPCPCGSGLKYKKCCGKAEGAFPAVAVQELKQIQKDVMEFAFTEHKDTIDQFL
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYSFLSDLDQSAQKICVFNLGVWGVFARPLADGGLTIFEDFLQKKGSSILRSQTKEAVQ
HHHHHHHHHHHHHHHEEHEECCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHH
SWKDLSPALLRVKHITDGGIRFEDAVTNEELTVRMNVKREGPFVGEYVLGFPIKIGSHTE
HHHCCCHHHHHHHHCCCCCCEEHHCCCCCCEEEEEECCCCCCCCCHHHHCCCEEECCCCE
FFLQFTIYPAKMADALKDRLSEALNRFTEEGGTKEQLMREDFHHVLMHLCRQEESTPSEQ
EEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
VSEDIEWANEMEKETALVFEKGMLDEGHSEPFVSWAVGLWKSYCAKKAPVIKKTEAFAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEYFINTISKSEKSISQAKLAKKYGVSASTVSNRFKDIEAVLQDELDHHLELMPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKVKRNMPCPCGSGLKYKKCCGKAEGAFPAVAVQELKQIQKDVMEFAFTEHKDTIDQFL
CCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYSFLSDLDQSAQKICVFNLGVWGVFARPLADGGLTIFEDFLQKKGSSILRSQTKEAVQ
HHHHHHHHHHHHHHHEEHEECCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHH
SWKDLSPALLRVKHITDGGIRFEDAVTNEELTVRMNVKREGPFVGEYVLGFPIKIGSHTE
HHHCCCHHHHHHHHCCCCCCEEHHCCCCCCEEEEEECCCCCCCCCHHHHCCCEEECCCCE
FFLQFTIYPAKMADALKDRLSEALNRFTEEGGTKEQLMREDFHHVLMHLCRQEESTPSEQ
EEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
VSEDIEWANEMEKETALVFEKGMLDEGHSEPFVSWAVGLWKSYCAKKAPVIKKTEAFAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEYFINTISKSEKSISQAKLAKKYGVSASTVSNRFKDIEAVLQDELDHHLELMPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]