| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is ycbE [H]
Identifier: 52784109
GI number: 52784109
Start: 260726
End: 262102
Strand: Direct
Name: ycbE [H]
Synonym: BLi00286
Alternate gene names: 52784109
Gene position: 260726-262102 (Clockwise)
Preceding gene: 52784108
Following gene: 52784110
Centisome position: 6.17
GC content: 52.58
Gene sequence:
>1377_bases ATGAAAAAAAATCGTGCAGCCTCCCCCGATACCGCGGGGAAAAGAAGTTCTGTCCGCTGGTTTGTCGTGTCTATGCTGTT TCTCGTCACATCCATTAATTATGCCGACCGTGCGACACTTTCGATCGTCGGCGATTCTGTGCAGCATGAGCTTGGGCTGA GTTCGGTGGCGATGGGGTATGTCTTTTCCGCATTTGGCTGGGCGTATGTTGTCGGCCAAATCCCCGGAGGCTGGCTGCTC GACCGTTTTGGGTCGAAAATCGTCATCGCCGCCAGCATCTTCTTTTGGTCATTGTTTACCCTTTTGCAGGGTGCGCTTGG CTTTTTCGCCGCGGGAACGGCCGTAATCCTTTTATTTGCGCTCAGATTTCTCGTCGGTCTGTCAGAAGCCCCGTCCTTCC CCGGCAACGGCCGGGTGGTGGCTTCCTGGTTTCCAAGTTCTGAACGCGGAACAGCTTCGGCGATCTTCAACTCGGCGCAG TACTTCGCACTCGTCATTTTTTCACCGCTGATGGGGTGGCTCGCCCACTCTTTCAGCTGGCATACGGTTTTTGTCATTAT GGGTGCACTGGGGATCGCGATGTCGTTCATTTGGCTGAAAACGATTTACGAACCGAAAAAACACCCGAGAATAAACGCCG CCGAACTGGCGTACATCGAAGAAGGCGGCGCGCTTGTCTCGATGGATGAGGGAAAGAACGCGGAAAAAAAAGAAAAGGAG TCGCAATGGCCTTATATTAAGCAGCTTTTAAGAAGCCGGATGCTGCTCGGGGTGTATATCGCTCAATACTGCATCACAAC GCTGACCTATTTCTTTCTGACATGGTTTCCGGTCTATCTTGTTCAGGCGCGCGGCATGTCGATCCTTGAAGCGGGTTTTG TCGCATCGCTTCCTGCAATCTGCGGATTTTTAGGAGGATTGCTGGGCGGGTTCGTGTCAGACTTCCTTTTGAAAAAGGGC TGCTCCATAACGGTTGCCAGAAAAACGCCGATCATCCTCGGCATGCTGATGTCCTGCTCAATGATCATATGCAACTATGC AGATTCGTCCTGGCTGGTCGTTTCCATCATGTCGCTTGCCTTTTTCGGAAAAGGATTCGGCGCGCTGGGCTGGGCGGTTG TGTCAGATACCTCGCCAAAGGAGTGTGCCGGCTTGAGCGGCGGCATCTTCAACACCTTTGGAAACATTGCGTCCATCACG ACGCCCATCATCATCGGATATATCGTGAATGCGACAGGCTCATTTAACGGAGCGCTTGTGTTTGTCGGAGCCAACGCGAT TGCCGCGGTATTAAGCTATTTGTTTCTCGTCGGGCCGATCAAGCGCATCGAACTGCAGAAAGAGAAAGACCCTGCGGACA CCACTTTATCCATGTGA
Upstream 100 bases:
>100_bases CAGGGGGAGGCAGCCAAAGAATTTTTTACAGCCGTGAAAACCGTATTTGTCAAACCGTAAGTCAGTCGTTTCGGTACAAA TGAATAAAGGAGAAGATGCT
Downstream 100 bases:
>100_bases AATGTAAGCGCTTTAATAAGAGGGAGGCTAAATCGATATGAATACAAACATCCATCAGCATGTAAAAGAGGAGAAAGCAT CGCAAACACCGTCTATTGCC
Product: YcbE
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKKNRAASPDTAGKRSSVRWFVVSMLFLVTSINYADRATLSIVGDSVQHELGLSSVAMGYVFSAFGWAYVVGQIPGGWLL DRFGSKIVIAASIFFWSLFTLLQGALGFFAAGTAVILLFALRFLVGLSEAPSFPGNGRVVASWFPSSERGTASAIFNSAQ YFALVIFSPLMGWLAHSFSWHTVFVIMGALGIAMSFIWLKTIYEPKKHPRINAAELAYIEEGGALVSMDEGKNAEKKEKE SQWPYIKQLLRSRMLLGVYIAQYCITTLTYFFLTWFPVYLVQARGMSILEAGFVASLPAICGFLGGLLGGFVSDFLLKKG CSITVARKTPIILGMLMSCSMIICNYADSSWLVVSIMSLAFFGKGFGALGWAVVSDTSPKECAGLSGGIFNTFGNIASIT TPIIIGYIVNATGSFNGALVFVGANAIAAVLSYLFLVGPIKRIELQKEKDPADTTLSM
Sequences:
>Translated_458_residues MKKNRAASPDTAGKRSSVRWFVVSMLFLVTSINYADRATLSIVGDSVQHELGLSSVAMGYVFSAFGWAYVVGQIPGGWLL DRFGSKIVIAASIFFWSLFTLLQGALGFFAAGTAVILLFALRFLVGLSEAPSFPGNGRVVASWFPSSERGTASAIFNSAQ YFALVIFSPLMGWLAHSFSWHTVFVIMGALGIAMSFIWLKTIYEPKKHPRINAAELAYIEEGGALVSMDEGKNAEKKEKE SQWPYIKQLLRSRMLLGVYIAQYCITTLTYFFLTWFPVYLVQARGMSILEAGFVASLPAICGFLGGLLGGFVSDFLLKKG CSITVARKTPIILGMLMSCSMIICNYADSSWLVVSIMSLAFFGKGFGALGWAVVSDTSPKECAGLSGGIFNTFGNIASIT TPIIIGYIVNATGSFNGALVFVGANAIAAVLSYLFLVGPIKRIELQKEKDPADTTLSM >Mature_458_residues MKKNRAASPDTAGKRSSVRWFVVSMLFLVTSINYADRATLSIVGDSVQHELGLSSVAMGYVFSAFGWAYVVGQIPGGWLL DRFGSKIVIAASIFFWSLFTLLQGALGFFAAGTAVILLFALRFLVGLSEAPSFPGNGRVVASWFPSSERGTASAIFNSAQ YFALVIFSPLMGWLAHSFSWHTVFVIMGALGIAMSFIWLKTIYEPKKHPRINAAELAYIEEGGALVSMDEGKNAEKKEKE SQWPYIKQLLRSRMLLGVYIAQYCITTLTYFFLTWFPVYLVQARGMSILEAGFVASLPAICGFLGGLLGGFVSDFLLKKG CSITVARKTPIILGMLMSCSMIICNYADSSWLVVSIMSLAFFGKGFGALGWAVVSDTSPKECAGLSGGIFNTFGNIASIT TPIIIGYIVNATGSFNGALVFVGANAIAAVLSYLFLVGPIKRIELQKEKDPADTTLSM
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI9966811, Length=404, Percent_Identity=26.980198019802, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI6912666, Length=403, Percent_Identity=26.5508684863524, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI21322234, Length=402, Percent_Identity=27.1144278606965, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI9945322, Length=410, Percent_Identity=26.3414634146341, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI148743791, Length=373, Percent_Identity=26.2734584450402, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI4885441, Length=381, Percent_Identity=25.1968503937008, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI154350196, Length=423, Percent_Identity=22.4586288416076, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI5031955, Length=268, Percent_Identity=26.865671641791, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI256219598, Length=394, Percent_Identity=25.8883248730964, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI4503847, Length=394, Percent_Identity=25.8883248730964, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI256219483, Length=394, Percent_Identity=25.8883248730964, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI148728191, Length=314, Percent_Identity=25.796178343949, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI223718438, Length=179, Percent_Identity=31.8435754189944, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI256219543, Length=309, Percent_Identity=26.8608414239482, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI256219564, Length=305, Percent_Identity=27.2131147540984, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI154800443, Length=373, Percent_Identity=23.5924932975871, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1789152, Length=433, Percent_Identity=64.4341801385681, Blast_Score=592, Evalue=1e-170, Organism=Escherichia coli, GI1789515, Length=438, Percent_Identity=58.9041095890411, Blast_Score=552, Evalue=1e-158, Organism=Escherichia coli, GI87082320, Length=437, Percent_Identity=42.1052631578947, Blast_Score=361, Evalue=1e-101, Organism=Escherichia coli, GI2367379, Length=435, Percent_Identity=31.264367816092, Blast_Score=199, Evalue=5e-52, Organism=Escherichia coli, GI2367193, Length=448, Percent_Identity=25, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1788573, Length=456, Percent_Identity=21.9298245614035, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115533554, Length=434, Percent_Identity=29.0322580645161, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI115533556, Length=431, Percent_Identity=29.4663573085847, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17552542, Length=293, Percent_Identity=28.3276450511945, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17535049, Length=434, Percent_Identity=23.0414746543779, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17560030, Length=405, Percent_Identity=22.962962962963, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17569727, Length=416, Percent_Identity=24.7596153846154, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI71997452, Length=383, Percent_Identity=24.2819843342037, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17554148, Length=360, Percent_Identity=24.4444444444444, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI32565914, Length=427, Percent_Identity=22.0140515222482, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71991448, Length=396, Percent_Identity=25, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71991453, Length=396, Percent_Identity=25, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32565916, Length=272, Percent_Identity=22.7941176470588, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193205400, Length=288, Percent_Identity=23.9583333333333, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71989129, Length=258, Percent_Identity=27.5193798449612, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25145964, Length=255, Percent_Identity=23.921568627451, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193208223, Length=357, Percent_Identity=24.6498599439776, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193207426, Length=270, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17563054, Length=338, Percent_Identity=23.9644970414201, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25141318, Length=345, Percent_Identity=25.2173913043478, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25141316, Length=345, Percent_Identity=24.9275362318841, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25141341, Length=345, Percent_Identity=24.9275362318841, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17537329, Length=279, Percent_Identity=25.8064516129032, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17563754, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554962, Length=348, Percent_Identity=22.4137931034483, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25151055, Length=242, Percent_Identity=22.3140495867769, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45550460, Length=467, Percent_Identity=26.5524625267666, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI28573708, Length=406, Percent_Identity=29.3103448275862, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI28573707, Length=406, Percent_Identity=29.3103448275862, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24655255, Length=419, Percent_Identity=27.4463007159904, Blast_Score=112, Evalue=7e-25, Organism=Drosophila melanogaster, GI28573299, Length=460, Percent_Identity=27.1739130434783, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24639764, Length=447, Percent_Identity=25.0559284116331, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24654215, Length=451, Percent_Identity=26.8292682926829, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI20130135, Length=470, Percent_Identity=26.1702127659574, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI19922400, Length=435, Percent_Identity=27.1264367816092, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24641682, Length=414, Percent_Identity=26.5700483091787, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24648416, Length=432, Percent_Identity=23.6111111111111, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI21356189, Length=432, Percent_Identity=23.6111111111111, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24655271, Length=468, Percent_Identity=26.0683760683761, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI62484226, Length=414, Percent_Identity=26.8115942028986, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24584153, Length=414, Percent_Identity=25.6038647342995, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24583789, Length=409, Percent_Identity=25.6723716381418, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI20130167, Length=461, Percent_Identity=24.9457700650759, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24580790, Length=410, Percent_Identity=24.1463414634146, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI20129235, Length=422, Percent_Identity=25.8293838862559, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24658658, Length=404, Percent_Identity=24.5049504950495, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24658674, Length=404, Percent_Identity=25.7425742574257, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24658666, Length=372, Percent_Identity=24.1935483870968, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI221474708, Length=289, Percent_Identity=27.3356401384083, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24653727, Length=375, Percent_Identity=24, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI45552797, Length=428, Percent_Identity=24.2990654205607, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24658689, Length=428, Percent_Identity=24.2990654205607, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI45550495, Length=416, Percent_Identity=23.7980769230769, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI19920686, Length=436, Percent_Identity=23.8532110091743, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24658696, Length=464, Percent_Identity=23.0603448275862, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651789, Length=437, Percent_Identity=25.4004576659039, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24651787, Length=437, Percent_Identity=25.4004576659039, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49530; Mature: 49530
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNRAASPDTAGKRSSVRWFVVSMLFLVTSINYADRATLSIVGDSVQHELGLSSVAMGY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHCHHHHHHHH VFSAFGWAYVVGQIPGGWLLDRFGSKIVIAASIFFWSLFTLLQGALGFFAAGTAVILLFA HHHHHHHHHHHHCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFLVGLSEAPSFPGNGRVVASWFPSSERGTASAIFNSAQYFALVIFSPLMGWLAHSFSW HHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HTVFVIMGALGIAMSFIWLKTIYEPKKHPRINAAELAYIEEGGALVSMDEGKNAEKKEKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCEEEEECCCCCCHHHHHH SQWPYIKQLLRSRMLLGVYIAQYCITTLTYFFLTWFPVYLVQARGMSILEAGFVASLPAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CGFLGGLLGGFVSDFLLKKGCSITVARKTPIILGMLMSCSMIICNYADSSWLVVSIMSLA HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH FFGKGFGALGWAVVSDTSPKECAGLSGGIFNTFGNIASITTPIIIGYIVNATGSFNGALV HHCCCCHHHHEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEE FVGANAIAAVLSYLFLVGPIKRIELQKEKDPADTTLSM EECHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKKNRAASPDTAGKRSSVRWFVVSMLFLVTSINYADRATLSIVGDSVQHELGLSSVAMGY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHCHHHHHHHH VFSAFGWAYVVGQIPGGWLLDRFGSKIVIAASIFFWSLFTLLQGALGFFAAGTAVILLFA HHHHHHHHHHHHCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFLVGLSEAPSFPGNGRVVASWFPSSERGTASAIFNSAQYFALVIFSPLMGWLAHSFSW HHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HTVFVIMGALGIAMSFIWLKTIYEPKKHPRINAAELAYIEEGGALVSMDEGKNAEKKEKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCEEEEECCCCCCHHHHHH SQWPYIKQLLRSRMLLGVYIAQYCITTLTYFFLTWFPVYLVQARGMSILEAGFVASLPAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CGFLGGLLGGFVSDFLLKKGCSITVARKTPIILGMLMSCSMIICNYADSSWLVVSIMSLA HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH FFGKGFGALGWAVVSDTSPKECAGLSGGIFNTFGNIASITTPIIIGYIVNATGSFNGALV HHCCCCHHHHEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEE FVGANAIAAVLSYLFLVGPIKRIELQKEKDPADTTLSM EECHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7704254; 9384377 [H]