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The map label for this gene is ybbC [H]

Identifier: 52784019

GI number: 52784019

Start: 167677

End: 168906

Strand: Reverse

Name: ybbC [H]

Synonym: BLi00186

Alternate gene names: 52784019

Gene position: 168906-167677 (Counterclockwise)

Preceding gene: 52784020

Following gene: 52784018

Centisome position: 4.0

GC content: 46.5

Gene sequence:

>1230_bases
ATGGGAAAAAAAGCAATCTGGCTGCTTGCTGGAATGTTTGTCTTCAGTACACTAACCGCAGCAGCTGCCTTTCCGGACAA
AGAAAAAAAAGCAAAGGTCTCACCGGGTATTGAAGTGCTCATGAACAAAAAAAGCATATTAAAAGGAAAAAGGGTCGGTC
TCATTACAAATCCAACCGGTGTCAATTCGACATTAACAAGCAGCATCGATTTGCTTCACCAAGCCCCCGGTATTGAGCTG
ACCGCTCTCTATGGTCCAGAGCACGGTGTAAGAGGAGACGCTCAAGCCGGTGACAAGGTTGACTCTTATATTGATGAAAA
AACCGGTCTCCCCGTCTACAGCCTCTACGGAGATACGAGAAAGCCGACACCGGAGATGTTGAAAAACGTTGACGTCCTGC
TATTTGATATCCAAGATGTCGGAACACGGTTTTACACTTACATTTACACTATGGCATATGCGATGGAAGCGGCAAAAGAA
AATGATATTCCATTCATCGTCCTTGACCGCCCAAACCCGCAAAACGGCTTAAAAGTTGAAGGGCCTGTCCTAGATCCGGA
TTATTCTTCATTTGTCGGAATGTATCCCGTCCCTCTAAGTCACGGAATGACGGCAGGAGAATTGGCAAAGCTGTTTAATG
ATGAATTTAACATCGGAGCCGACCTAACCGTCATAAAAATGAAAGGCTGGAAGCGGCAGATGTTCTTTGAAGACACCGGT
CTTCCTTTCGTCCTGCCTTCCCCGAACATGCCGACGCCGGATACGAGCATCGTCTACCCGGGCACAGGTTTAATTGAAGG
AACCAACATGTCAGAGGGAAGGGGCACGACAAAGCCATTTGAATTGATTGGTGCGCCTTACATGAAAAGTACGGAGCTCG
CCGAAAAATTAAACGGTCTGAAGCTGCCTGGCGTCAGATTCAGAGCCGCCTCCTTCAATCCGACATTTTCAAAGCATCAG
AATAAACTGTGCCACGGGGTGGAGCTTTACGTGACCAACAGGTCCGCTTTTAAGCCTGTAAATACCGGTATTGCGATCAT
CAAAACCGTCCATGACCTCTACCCGGACGACTTTGAGTTCCTCCCTTCAGGCAATTTCAACCGTCTGATCGGGAACGGAT
GGGTCAAAACAATGATTGAGCAAGGCGCTTCAATTGATGAAATCGCCAAAAAATACGAAGCAGAGCAAAAACGGTTTATG
AATATCAGAAAGAAGTATTTGCTTTATTAG

Upstream 100 bases:

>100_bases
TAGACATTCCTTCAGTCACGCGCCCCGGGGAAACCCTTTACCCGTATGGCTACGGATTGAATATTAAAAACGGCAAGCCG
CTTCACAAAGGAGGGTCATG

Downstream 100 bases:

>100_bases
GAAGAGCGGGAGCCGCTCTTCTTTATTTTTGATTAGACTGTTCAATCATTCCCATCTCATGTAAGATATGTGAAACTGCG
TCTTATTAGAGGGGAGATAC

Product: YbbC

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MGKKAIWLLAGMFVFSTLTAAAAFPDKEKKAKVSPGIEVLMNKKSILKGKRVGLITNPTGVNSTLTSSIDLLHQAPGIEL
TALYGPEHGVRGDAQAGDKVDSYIDEKTGLPVYSLYGDTRKPTPEMLKNVDVLLFDIQDVGTRFYTYIYTMAYAMEAAKE
NDIPFIVLDRPNPQNGLKVEGPVLDPDYSSFVGMYPVPLSHGMTAGELAKLFNDEFNIGADLTVIKMKGWKRQMFFEDTG
LPFVLPSPNMPTPDTSIVYPGTGLIEGTNMSEGRGTTKPFELIGAPYMKSTELAEKLNGLKLPGVRFRAASFNPTFSKHQ
NKLCHGVELYVTNRSAFKPVNTGIAIIKTVHDLYPDDFEFLPSGNFNRLIGNGWVKTMIEQGASIDEIAKKYEAEQKRFM
NIRKKYLLY

Sequences:

>Translated_409_residues
MGKKAIWLLAGMFVFSTLTAAAAFPDKEKKAKVSPGIEVLMNKKSILKGKRVGLITNPTGVNSTLTSSIDLLHQAPGIEL
TALYGPEHGVRGDAQAGDKVDSYIDEKTGLPVYSLYGDTRKPTPEMLKNVDVLLFDIQDVGTRFYTYIYTMAYAMEAAKE
NDIPFIVLDRPNPQNGLKVEGPVLDPDYSSFVGMYPVPLSHGMTAGELAKLFNDEFNIGADLTVIKMKGWKRQMFFEDTG
LPFVLPSPNMPTPDTSIVYPGTGLIEGTNMSEGRGTTKPFELIGAPYMKSTELAEKLNGLKLPGVRFRAASFNPTFSKHQ
NKLCHGVELYVTNRSAFKPVNTGIAIIKTVHDLYPDDFEFLPSGNFNRLIGNGWVKTMIEQGASIDEIAKKYEAEQKRFM
NIRKKYLLY
>Mature_408_residues
GKKAIWLLAGMFVFSTLTAAAAFPDKEKKAKVSPGIEVLMNKKSILKGKRVGLITNPTGVNSTLTSSIDLLHQAPGIELT
ALYGPEHGVRGDAQAGDKVDSYIDEKTGLPVYSLYGDTRKPTPEMLKNVDVLLFDIQDVGTRFYTYIYTMAYAMEAAKEN
DIPFIVLDRPNPQNGLKVEGPVLDPDYSSFVGMYPVPLSHGMTAGELAKLFNDEFNIGADLTVIKMKGWKRQMFFEDTGL
PFVLPSPNMPTPDTSIVYPGTGLIEGTNMSEGRGTTKPFELIGAPYMKSTELAEKLNGLKLPGVRFRAASFNPTFSKHQN
KLCHGVELYVTNRSAFKPVNTGIAIIKTVHDLYPDDFEFLPSGNFNRLIGNGWVKTMIEQGASIDEIAKKYEAEQKRFMN
IRKKYLLY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 45292; Mature: 45161

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKAIWLLAGMFVFSTLTAAAAFPDKEKKAKVSPGIEVLMNKKSILKGKRVGLITNPTG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCHHHHCCCCEEEEECCCC
VNSTLTSSIDLLHQAPGIELTALYGPEHGVRGDAQAGDKVDSYIDEKTGLPVYSLYGDTR
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCC
KPTPEMLKNVDVLLFDIQDVGTRFYTYIYTMAYAMEAAKENDIPFIVLDRPNPQNGLKVE
CCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE
GPVLDPDYSSFVGMYPVPLSHGMTAGELAKLFNDEFNIGADLTVIKMKGWKRQMFFEDTG
CCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCC
LPFVLPSPNMPTPDTSIVYPGTGLIEGTNMSEGRGTTKPFELIGAPYMKSTELAEKLNGL
CEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCC
KLPGVRFRAASFNPTFSKHQNKLCHGVELYVTNRSAFKPVNTGIAIIKTVHDLYPDDFEF
CCCCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEE
LPSGNFNRLIGNGWVKTMIEQGASIDEIAKKYEAEQKRFMNIRKKYLLY
CCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKKAIWLLAGMFVFSTLTAAAAFPDKEKKAKVSPGIEVLMNKKSILKGKRVGLITNPTG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCHHHHCCCCEEEEECCCC
VNSTLTSSIDLLHQAPGIELTALYGPEHGVRGDAQAGDKVDSYIDEKTGLPVYSLYGDTR
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCC
KPTPEMLKNVDVLLFDIQDVGTRFYTYIYTMAYAMEAAKENDIPFIVLDRPNPQNGLKVE
CCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE
GPVLDPDYSSFVGMYPVPLSHGMTAGELAKLFNDEFNIGADLTVIKMKGWKRQMFFEDTG
CCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCC
LPFVLPSPNMPTPDTSIVYPGTGLIEGTNMSEGRGTTKPFELIGAPYMKSTELAEKLNGL
CEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCC
KLPGVRFRAASFNPTFSKHQNKLCHGVELYVTNRSAFKPVNTGIAIIKTVHDLYPDDFEF
CCCCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEE
LPSGNFNRLIGNGWVKTMIEQGASIDEIAKKYEAEQKRFMNIRKKYLLY
CCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]