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The map label for this gene is pbpX [H]

Identifier: 52784014

GI number: 52784014

Start: 163584

End: 164753

Strand: Reverse

Name: pbpX [H]

Synonym: BLi00181

Alternate gene names: 52784014

Gene position: 164753-163584 (Counterclockwise)

Preceding gene: 52784018

Following gene: 52784013

Centisome position: 3.9

GC content: 38.21

Gene sequence:

>1170_bases
ATGGCAAGAACATACAGAACGCGAATAAAGAAAAGAAAAAAGCAGAAAACAAAAAGAAGGCTTATCATATTTTCCTTTTT
GGTTGTTTGTGGATTAATTTATCTTGCACTTCCAAGCGGTATGCGAGATCACCAGGAAAACCAATTGCAAGCAACTGAAA
AAAAGGCACAGCCTGAAGCAAAGAAAAAGCCAACACAAAATGAAACAAAAAAGAGCAAAATCGTCACAAAAAATGATAAT
GCTCAATTGGATCAATATTTGAAAAGCATTGGATTCAGCGGCACAGCATTGATCGTAGAAGATGGAAAAGTGGTGACAAG
CAAAGGGTATTTATATGCAAACCGCGAGGAAATGGTTCCCAATACACCAGATACCGTCTTTTATGTGGGGTCATCACAAA
AAGCGATTATTGCAACGGCAATTTTACAGCTGGAGGAAAAAGGATTGCTATCTGTAAATGACCCTGTTTCTAAGTATCTT
CCCAATTTTCCAAACGGCTCAAAGATCACCCTTTATCATTTCTTGACGCACACATCCGGAATTAGGGGTCACAAAGAAGG
CCGCGGATATATTTCGCCGGAAGATTTAATTAAAGATATCGAAAAACGGGGTGTAAAATACCCAACAGGGAAATGGGATT
ATAGAGACTCCAATTACTCGGTTCTGGCATACATTGTTTCCATGGTAAGCGGTGAACCAGTCGACCAATACATCAAAAAG
CATATTTTTAAACCTGCCGGTATGAAACATGCAGGCTTTTATAAAACATTTGCTAAAGAGTCAAATCCATCGACAGGATA
TAAATTAAACCTGCAAAAAAAGCTTTATACGCCTGACATGCCGGATTTATCACAGCTTTACGGGGCCGGTGATATTTATA
TGACCGCTTATGACATGTATTTGTTTGATAAAGCACTTTACGAAAGAAAAATCATTTCCAATGAAAGTTTTATGAAAATG
TTTACGCCGAATAAAGCAACATACGGCATGGGCTTTTATGTGTCTCCAGGAAGCTATTCAAGCCACGGTGTCATGCCCGG
CTACAACATATTAAACAGTTTCAGTCTGACAGGGAGCAGATACGTCATTCTATTTTCAAACATCCAAAACAACATTAAGT
CTTTTGGCAGTGTGAATAATCGGATCTTCTCTATTTTAAATGGATTTTGA

Upstream 100 bases:

>100_bases
TATTCGAGTTCATGTATGAAAATATTAGCATTTTGAAGAAACTTTTTAAGGGGTTATTGCGTCAGTAAATACGTCACATA
TAAAAGAAGGAGTACCCGAC

Downstream 100 bases:

>100_bases
ACAGCAGAGAAAGTTTTTACAGCTAAAAGGGATTTTAATTATAAATGTAGAAGATAGATGATAAATGAATTTTCAATATA
AAGGAAGGTCGTCATGTCAT

Product: PbpX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MARTYRTRIKKRKKQKTKRRLIIFSFLVVCGLIYLALPSGMRDHQENQLQATEKKAQPEAKKKPTQNETKKSKIVTKNDN
AQLDQYLKSIGFSGTALIVEDGKVVTSKGYLYANREEMVPNTPDTVFYVGSSQKAIIATAILQLEEKGLLSVNDPVSKYL
PNFPNGSKITLYHFLTHTSGIRGHKEGRGYISPEDLIKDIEKRGVKYPTGKWDYRDSNYSVLAYIVSMVSGEPVDQYIKK
HIFKPAGMKHAGFYKTFAKESNPSTGYKLNLQKKLYTPDMPDLSQLYGAGDIYMTAYDMYLFDKALYERKIISNESFMKM
FTPNKATYGMGFYVSPGSYSSHGVMPGYNILNSFSLTGSRYVILFSNIQNNIKSFGSVNNRIFSILNGF

Sequences:

>Translated_389_residues
MARTYRTRIKKRKKQKTKRRLIIFSFLVVCGLIYLALPSGMRDHQENQLQATEKKAQPEAKKKPTQNETKKSKIVTKNDN
AQLDQYLKSIGFSGTALIVEDGKVVTSKGYLYANREEMVPNTPDTVFYVGSSQKAIIATAILQLEEKGLLSVNDPVSKYL
PNFPNGSKITLYHFLTHTSGIRGHKEGRGYISPEDLIKDIEKRGVKYPTGKWDYRDSNYSVLAYIVSMVSGEPVDQYIKK
HIFKPAGMKHAGFYKTFAKESNPSTGYKLNLQKKLYTPDMPDLSQLYGAGDIYMTAYDMYLFDKALYERKIISNESFMKM
FTPNKATYGMGFYVSPGSYSSHGVMPGYNILNSFSLTGSRYVILFSNIQNNIKSFGSVNNRIFSILNGF
>Mature_388_residues
ARTYRTRIKKRKKQKTKRRLIIFSFLVVCGLIYLALPSGMRDHQENQLQATEKKAQPEAKKKPTQNETKKSKIVTKNDNA
QLDQYLKSIGFSGTALIVEDGKVVTSKGYLYANREEMVPNTPDTVFYVGSSQKAIIATAILQLEEKGLLSVNDPVSKYLP
NFPNGSKITLYHFLTHTSGIRGHKEGRGYISPEDLIKDIEKRGVKYPTGKWDYRDSNYSVLAYIVSMVSGEPVDQYIKKH
IFKPAGMKHAGFYKTFAKESNPSTGYKLNLQKKLYTPDMPDLSQLYGAGDIYMTAYDMYLFDKALYERKIISNESFMKMF
TPNKATYGMGFYVSPGSYSSHGVMPGYNILNSFSLTGSRYVILFSNIQNNIKSFGSVNNRIFSILNGF

Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI1786574, Length=235, Percent_Identity=27.2340425531915, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87082101, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533026, Length=292, Percent_Identity=23.972602739726, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 44091; Mature: 43960

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTYRTRIKKRKKQKTKRRLIIFSFLVVCGLIYLALPSGMRDHQENQLQATEKKAQPEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
KKKPTQNETKKSKIVTKNDNAQLDQYLKSIGFSGTALIVEDGKVVTSKGYLYANREEMVP
HCCCCCCCHHHHCCEECCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCEEEECHHHCCC
NTPDTVFYVGSSQKAIIATAILQLEEKGLLSVNDPVSKYLPNFPNGSKITLYHFLTHTSG
CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCEEEEEEEEHHCCC
IRGHKEGRGYISPEDLIKDIEKRGVKYPTGKWDYRDSNYSVLAYIVSMVSGEPVDQYIKK
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
HIFKPAGMKHAGFYKTFAKESNPSTGYKLNLQKKLYTPDMPDLSQLYGAGDIYMTAYDMY
HHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEHEECCCCCCCHHHHHCCCCEEEEHHHHH
LFDKALYERKIISNESFMKMFTPNKATYGMGFYVSPGSYSSHGVMPGYNILNSFSLTGSR
HHHHHHHHHHHHCCCCCEEEECCCCCEECCEEEECCCCCCCCCCCCCHHHHHHHCCCCCE
YVILFSNIQNNIKSFGSVNNRIFSILNGF
EEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARTYRTRIKKRKKQKTKRRLIIFSFLVVCGLIYLALPSGMRDHQENQLQATEKKAQPEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
KKKPTQNETKKSKIVTKNDNAQLDQYLKSIGFSGTALIVEDGKVVTSKGYLYANREEMVP
HCCCCCCCHHHHCCEECCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCEEEECHHHCCC
NTPDTVFYVGSSQKAIIATAILQLEEKGLLSVNDPVSKYLPNFPNGSKITLYHFLTHTSG
CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCEEEEEEEEHHCCC
IRGHKEGRGYISPEDLIKDIEKRGVKYPTGKWDYRDSNYSVLAYIVSMVSGEPVDQYIKK
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
HIFKPAGMKHAGFYKTFAKESNPSTGYKLNLQKKLYTPDMPDLSQLYGAGDIYMTAYDMY
HHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEHEECCCCCCCHHHHHCCCCEEEEHHHHH
LFDKALYERKIISNESFMKMFTPNKATYGMGFYVSPGSYSSHGVMPGYNILNSFSLTGSR
HHHHHHHHHHHHCCCCCEEEECCCCCEECCEEEECCCCCCCCCCCCCHHHHHHHCCCCCE
YVILFSNIQNNIKSFGSVNNRIFSILNGF
EEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]