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The map label for this gene is cotD

Identifier: 52143791

GI number: 52143791

Start: 1522407

End: 1522832

Strand: Direct

Name: cotD

Synonym: BCZK1438

Alternate gene names: NA

Gene position: 1522407-1522832 (Clockwise)

Preceding gene: 52143797

Following gene: 52143792

Centisome position: 28.72

GC content: 42.96

Gene sequence:

>426_bases
ATGCATCATTGTCATCCTTGCTTTGGAGGGCATAAGCCTACAGGACCTATTTGTACAACTGCTCCTGTCATTCATCCGAC
GAAACAATGCGTAACACACTCTTTTTCAACAACGGTGGTGCCACACATTTTCCCGACACATACAACACATGTACATCATC
AACAAATTAAAAACCAAAACTTCTTCCCGCAAACAAATTCAAATGTAAATGTTGTGGACCCAATCGACCCAGGATTCGGC
GGATGTGGACCATGTGGCCATGGTCATCATCATCACCACCACGGTCATCAAATATCTCCATTCGGACCAGGACCGAATGT
ATCACCGTTTGGACCAGGACCAAATGTATCACCGTTTTTACCAAATAATGTATCACCAGTAGGTCCGAATATTGGACCAA
ACGTTGGTGGAATATTTAAAAAGTAA

Upstream 100 bases:

>100_bases
TTCCTTAGAATAAATGGGTATATATAACAAGCGGCTTACCCTCTTTTCTCATACTGTAAAGTGTAATCAGATTTTTTTTA
TGAGAGAGGAGAGAAAAACT

Downstream 100 bases:

>100_bases
ATGATATGTTAGAACTAGCGAAATGCTAGTTCTTTTTTTGTAATTGGAGTGTTGATATGAAAGTTATTGCAGTAACAGGC
TATAAGCCATTTGAACTTGG

Product: spore coat protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MHHCHPCFGGHKPTGPICTTAPVIHPTKQCVTHSFSTTVVPHIFPTHTTHVHHQQIKNQNFFPQTNSNVNVVDPIDPGFG
GCGPCGHGHHHHHHGHQISPFGPGPNVSPFGPGPNVSPFLPNNVSPVGPNIGPNVGGIFKK

Sequences:

>Translated_141_residues
MHHCHPCFGGHKPTGPICTTAPVIHPTKQCVTHSFSTTVVPHIFPTHTTHVHHQQIKNQNFFPQTNSNVNVVDPIDPGFG
GCGPCGHGHHHHHHGHQISPFGPGPNVSPFGPGPNVSPFLPNNVSPVGPNIGPNVGGIFKK
>Mature_141_residues
MHHCHPCFGGHKPTGPICTTAPVIHPTKQCVTHSFSTTVVPHIFPTHTTHVHHQQIKNQNFFPQTNSNVNVVDPIDPGFG
GCGPCGHGHHHHHHGHQISPFGPGPNVSPFGPGPNVSPFLPNNVSPVGPNIGPNVGGIFKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15004; Mature: 15004

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHCHPCFGGHKPTGPICTTAPVIHPTKQCVTHSFSTTVVPHIFPTHTTHVHHQQIKNQN
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
FFPQTNSNVNVVDPIDPGFGGCGPCGHGHHHHHHGHQISPFGPGPNVSPFGPGPNVSPFL
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PNNVSPVGPNIGPNVGGIFKK
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHHCHPCFGGHKPTGPICTTAPVIHPTKQCVTHSFSTTVVPHIFPTHTTHVHHQQIKNQN
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
FFPQTNSNVNVVDPIDPGFGGCGPCGHGHHHHHHGHQISPFGPGPNVSPFGPGPNVSPFL
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PNNVSPVGPNIGPNVGGIFKK
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA