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The map label for this gene is ypsA

Identifier: 52143792

GI number: 52143792

Start: 1522889

End: 1523443

Strand: Direct

Name: ypsA

Synonym: BCZK1439

Alternate gene names: NA

Gene position: 1522889-1523443 (Clockwise)

Preceding gene: 52143791

Following gene: 52143793

Centisome position: 28.73

GC content: 32.43

Gene sequence:

>555_bases
ATGAAAGTTATTGCAGTAACAGGCTATAAGCCATTTGAACTTGGAATATTTAAAAATGATCATCCAGGAGTAGAATGTAT
AAAAAAGGCGCTGCGTCGTAAATTAACTGCTTTTGTAGAAGATGGTTTAGAGTGGGTTATAATAAGTGGCCAGTTAGGTG
TAGAATTATGGGCTGCTGAAGTTGTTTTTGAAATACAAGTAGAATATCCAGATTTAAAATTAGCGGTATTTACTCCATTT
TTAGAACAAGAAGAAGGTTGGAAGGAAGATAACCGTGAATATTACGAATTTATTCTCTCTCAAGCAGACCATGTTGATAG
TATCACAAAACGGAAGTACGAAAGCCCAGAGCAATTTAAATTAAAAAATCAATTTTTTATTGAAAAAAGTGATGCACTTT
TAGCTGTATATGATGAAGAAAAACCAGGGAGTCCTAAATATATTGTAGAAGCGGCAAAGAAAAAAGGAGAAATAGAAAAT
TATCACAGTTATTTCATTCTTTTTTCCGATTTACAAGATATAATAGAAGAGGAACAGTGGAATAATGCTGAGTAA

Upstream 100 bases:

>100_bases
GTCCGAATATTGGACCAAACGTTGGTGGAATATTTAAAAAGTAAATGATATGTTAGAACTAGCGAAATGCTAGTTCTTTT
TTTGTAATTGGAGTGTTGAT

Downstream 100 bases:

>100_bases
TATGTAATATAGTACCCGTATATATGATTGACAAAAAGCATTGTTTCTGAAAAAATTTAGTTAATGAAAGTTTTGGCAAA
AATTTGAGGTGAAGAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKVIAVTGYKPFELGIFKNDHPGVECIKKALRRKLTAFVEDGLEWVIISGQLGVELWAAEVVFEIQVEYPDLKLAVFTPF
LEQEEGWKEDNREYYEFILSQADHVDSITKRKYESPEQFKLKNQFFIEKSDALLAVYDEEKPGSPKYIVEAAKKKGEIEN
YHSYFILFSDLQDIIEEEQWNNAE

Sequences:

>Translated_184_residues
MKVIAVTGYKPFELGIFKNDHPGVECIKKALRRKLTAFVEDGLEWVIISGQLGVELWAAEVVFEIQVEYPDLKLAVFTPF
LEQEEGWKEDNREYYEFILSQADHVDSITKRKYESPEQFKLKNQFFIEKSDALLAVYDEEKPGSPKYIVEAAKKKGEIEN
YHSYFILFSDLQDIIEEEQWNNAE
>Mature_184_residues
MKVIAVTGYKPFELGIFKNDHPGVECIKKALRRKLTAFVEDGLEWVIISGQLGVELWAAEVVFEIQVEYPDLKLAVFTPF
LEQEEGWKEDNREYYEFILSQADHVDSITKRKYESPEQFKLKNQFFIEKSDALLAVYDEEKPGSPKYIVEAAKKKGEIEN
YHSYFILFSDLQDIIEEEQWNNAE

Specific function: Unknown

COG id: COG4474

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0398 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1408_BACAH (A0RC08)

Other databases:

- EMBL:   CP000485
- RefSeq:   YP_894258.1
- ProteinModelPortal:   A0RC08
- SMR:   A0RC08
- STRING:   A0RC08
- EnsemblBacteria:   EBBACT00000068166
- GeneID:   4546663
- GenomeReviews:   CP000485_GR
- KEGG:   btl:BALH_1408
- eggNOG:   COG4474
- GeneTree:   EBGT00050000001030
- HOGENOM:   HBG338123
- OMA:   LWVTGYR
- ProtClustDB:   PRK13660
- BioCyc:   BTHU412694:BALH_1408-MONOMER
- HAMAP:   MF_01575
- InterPro:   IPR010697
- PIRSF:   PIRSF021290

Pfam domain/function: PF06908 DUF1273

EC number: NA

Molecular weight: Translated: 21511; Mature: 21511

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIAVTGYKPFELGIFKNDHPGVECIKKALRRKLTAFVEDGLEWVIISGQLGVELWAAE
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHEEEE
VVFEIQVEYPDLKLAVFTPFLEQEEGWKEDNREYYEFILSQADHVDSITKRKYESPEQFK
EEEEEEEECCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHEE
LKNQFFIEKSDALLAVYDEEKPGSPKYIVEAAKKKGEIENYHSYFILFSDLQDIIEEEQW
ECCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHCC
NNAE
CCCC
>Mature Secondary Structure
MKVIAVTGYKPFELGIFKNDHPGVECIKKALRRKLTAFVEDGLEWVIISGQLGVELWAAE
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHEEEE
VVFEIQVEYPDLKLAVFTPFLEQEEGWKEDNREYYEFILSQADHVDSITKRKYESPEQFK
EEEEEEEECCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHEE
LKNQFFIEKSDALLAVYDEEKPGSPKYIVEAAKKKGEIENYHSYFILFSDLQDIIEEEQW
ECCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHCC
NNAE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA