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The map label for this gene is yshE [H]

Identifier: 52143772

GI number: 52143772

Start: 1544620

End: 1545006

Strand: Direct

Name: yshE [H]

Synonym: BCZK1459

Alternate gene names: 52143772

Gene position: 1544620-1545006 (Clockwise)

Preceding gene: 52143771

Following gene: 52143773

Centisome position: 29.14

GC content: 34.11

Gene sequence:

>387_bases
ATGATTAATTTTTTATTATATTTAGCAGTAACACTTGGTCTTTTATGCATTGGTCTTTTCCTAATGGAAGTGACAACGAA
AGTAAAAGAATTTAAGTTAATGGCCCAAGGGAATAAGGCGGTAAGCTATGTACTTGGAGGTCGATTACTTGGGTTAGCTA
TTGTTTTATATTCAACAGCAGCTAATTCTATTTCACTTTTTGATATGGTTTCGTGGGGAGCGGTTGGAATTCTGGCTCAA
ATCATCGTCTTTTATTTAGCTGAGTGGCTTACACCACGCTTTAATATAAATAAAAGTCTTGAAGAAGATAATCAAGCAGT
CGGTCTTTTTCTTATGTTTTTATCGCTTTCAATTGGGATCGTAATTGCTGGTTGTATAACTTATTAA

Upstream 100 bases:

>100_bases
ATTGCTGGAAAAGCGAGTAGTATTGGTATTCGTGCTGGTGAAAAAATTACGGGGAATGAATCGTACTATTTACCGGTAGG
TATAAAAAAGGAGGAAGTAT

Downstream 100 bases:

>100_bases
AAACCTTACGTTTAAACGTAAGGTTTTTATTTTTACTAATTTTGAAATGGGTGCTTTATTCATTTGATGCGTCGAAAGAG
AAATAATATGTATATGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MINFLLYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLFDMVSWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY

Sequences:

>Translated_128_residues
MINFLLYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLFDMVSWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY
>Mature_128_residues
MINFLLYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLFDMVSWGAVGILAQ
IIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

Organism=Escherichia coli, GI1790627, Length=125, Percent_Identity=30.4, Blast_Score=63, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 14005; Mature: 14005

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFLLYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
ANSISLFDMVSWGAVGILAQIIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VIAGCITY
HHHHHHCC
>Mature Secondary Structure
MINFLLYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
ANSISLFDMVSWGAVGILAQIIVFYLAEWLTPRFNINKSLEEDNQAVGLFLMFLSLSIGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VIAGCITY
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]