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The map label for this gene is tpn

Identifier: 52143242

GI number: 52143242

Start: 2118338

End: 2119351

Strand: Direct

Name: tpn

Synonym: BCZK1995

Alternate gene names: NA

Gene position: 2118338-2119351 (Clockwise)

Preceding gene: 52143243

Following gene: 52143239

Centisome position: 39.96

GC content: 34.62

Gene sequence:

>1014_bases
ATGCATAATAGACAGAACTATTTGTATGTAGGAGTAGATTTACATAAGGAGCATCATACGGCTGTTATTATTAATTGTTG
GCAAGAGAAATTAGGAGAAATACAATTTGAGAATAAACCATCTGCATTTTCGAAGTTTTTATTAGAAGTAGAGACATATG
TGAGTGCTGGGGTATCAGTTGTATTTGGTTTAGAGGATGTTGGTGGTTACGGAAGAGCGTTAGCGAAATATTTAGTAGAT
CATGAACAAGTAGTGAAAGAAGTAAACCCAGTTTTATCATTTTTAGAGCGAAAAAGCCATGTGACGACACAAAAAAGTGA
TAGTTGGGATGCGGAATGCGTAGCCCGTATACTAATAAATAAGTTAAATCAATTACCAGATGCAAAGCCAAACGATTTAT
TTTGGTCGATACAACAACTAGTTTCAAGAAGGAATGCATTAGTAAAAGCACAAAGTGCATTAAAGAACCAACTACATATT
CAATTAAACCATCATTATCCAAGCTATAAAAAGTTTTTCTCAGAGTTAGATGGAAAAACAGCATTAGCATTTTGGCAGCA
ATATCCGTCACCCTCTTGTTTAGAGGGGACGAATATAAAGCAATTAACAGCTTTTTTATTAGATGTTAGCAACAATACAT
GTTCGGTAAAGAAAGCAAGCGACATATTAAAACTTGTAAAAGAAGATGGACATACAATGAAGGAATATCAAGAAACACGA
GATTTTTTAGTAAGAAGTATTGTACGGGACATTGAGTTTAAAAAGAAAGAAATGAAATACATCGAGAGAGAATTAAAACA
GCTAGTAAATCTACTAGATTATCAATTAGAAACGATGCCGGGAATAGAACTTGTGACGGCATCAGCATTAATAGCTGAAA
TTGGGGATGTAAGGCGATTTTCAAATGCCAATAAATTAGCACGATTTGCGGGGATTGCACCTGTTTACTTTGGTTCTGGT
GGGAAAGGTAAGACACATAAAAGCAAACAGGGCACTACACGCTTTATTTTATAA

Upstream 100 bases:

>100_bases
GGATAGGCTTGCGTACCTATGCGCATCGGAAGATGAACGCTCGAACTAAGGTTGCCGACATTTTTATATATGACTAAATC
ATTGAATAGAGGGATGAGTT

Downstream 100 bases:

>100_bases
TCTAGCAGTACAGCAAGTGCAAGTAGCGAAAGGAAGTAAGTTACCTAGAAACCCAGTGTTTCATGCATACTATCAAAAGA
AACTTAAAGAGGGAAAAACA

Product: IS110 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MHNRQNYLYVGVDLHKEHHTAVIINCWQEKLGEIQFENKPSAFSKFLLEVETYVSAGVSVVFGLEDVGGYGRALAKYLVD
HEQVVKEVNPVLSFLERKSHVTTQKSDSWDAECVARILINKLNQLPDAKPNDLFWSIQQLVSRRNALVKAQSALKNQLHI
QLNHHYPSYKKFFSELDGKTALAFWQQYPSPSCLEGTNIKQLTAFLLDVSNNTCSVKKASDILKLVKEDGHTMKEYQETR
DFLVRSIVRDIEFKKKEMKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFSNANKLARFAGIAPVYFGSG
GKGKTHKSKQGTTRFIL

Sequences:

>Translated_337_residues
MHNRQNYLYVGVDLHKEHHTAVIINCWQEKLGEIQFENKPSAFSKFLLEVETYVSAGVSVVFGLEDVGGYGRALAKYLVD
HEQVVKEVNPVLSFLERKSHVTTQKSDSWDAECVARILINKLNQLPDAKPNDLFWSIQQLVSRRNALVKAQSALKNQLHI
QLNHHYPSYKKFFSELDGKTALAFWQQYPSPSCLEGTNIKQLTAFLLDVSNNTCSVKKASDILKLVKEDGHTMKEYQETR
DFLVRSIVRDIEFKKKEMKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFSNANKLARFAGIAPVYFGSG
GKGKTHKSKQGTTRFIL
>Mature_337_residues
MHNRQNYLYVGVDLHKEHHTAVIINCWQEKLGEIQFENKPSAFSKFLLEVETYVSAGVSVVFGLEDVGGYGRALAKYLVD
HEQVVKEVNPVLSFLERKSHVTTQKSDSWDAECVARILINKLNQLPDAKPNDLFWSIQQLVSRRNALVKAQSALKNQLHI
QLNHHYPSYKKFFSELDGKTALAFWQQYPSPSCLEGTNIKQLTAFLLDVSNNTCSVKKASDILKLVKEDGHTMKEYQETR
DFLVRSIVRDIEFKKKEMKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFSNANKLARFAGIAPVYFGSG
GKGKTHKSKQGTTRFIL

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 38396; Mature: 38396

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNRQNYLYVGVDLHKEHHTAVIINCWQEKLGEIQFENKPSAFSKFLLEVETYVSAGVSV
CCCCCCEEEEEEEECCCCCCEEEEEHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCHHE
VFGLEDVGGYGRALAKYLVDHEQVVKEVNPVLSFLERKSHVTTQKSDSWDAECVARILIN
EEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KLNQLPDAKPNDLFWSIQQLVSRRNALVKAQSALKNQLHIQLNHHYPSYKKFFSELDGKT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCCCCH
ALAFWQQYPSPSCLEGTNIKQLTAFLLDVSNNTCSVKKASDILKLVKEDGHTMKEYQETR
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
DFLVRSIVRDIEFKKKEMKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SNANKLARFAGIAPVYFGSGGKGKTHKSKQGTTRFIL
CCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHNRQNYLYVGVDLHKEHHTAVIINCWQEKLGEIQFENKPSAFSKFLLEVETYVSAGVSV
CCCCCCEEEEEEEECCCCCCEEEEEHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCHHE
VFGLEDVGGYGRALAKYLVDHEQVVKEVNPVLSFLERKSHVTTQKSDSWDAECVARILIN
EEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KLNQLPDAKPNDLFWSIQQLVSRRNALVKAQSALKNQLHIQLNHHYPSYKKFFSELDGKT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCCCCH
ALAFWQQYPSPSCLEGTNIKQLTAFLLDVSNNTCSVKKASDILKLVKEDGHTMKEYQETR
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
DFLVRSIVRDIEFKKKEMKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SNANKLARFAGIAPVYFGSGGKGKTHKSKQGTTRFIL
CCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1700062 [H]