Click here to switch to the map view.

The map label for this gene is yaeB [C]

Identifier: 52143231

GI number: 52143231

Start: 2130149

End: 2130622

Strand: Direct

Name: yaeB [C]

Synonym: BCZK2007

Alternate gene names: 52143231

Gene position: 2130149-2130622 (Clockwise)

Preceding gene: 52143230

Following gene: 52143228

Centisome position: 40.18

GC content: 34.39

Gene sequence:

>474_bases
ATGTTTTCAGTTCAGCCAATCGCATTTGTACATAATGAAAGAAAGGAAATAAAAGATGATGAGTGGGGAGAAGTAAGATC
CTATATTACTTTAACTGAAATGTATACAGAGGAAAGTATACAAGGGATTGAAGATTTTTCTCATATTGAAGTAGTTTTTT
ATTTTCATAAAGTAACGGATGAACAAATTCAATATGTTGCTAGACATCCTAGAAATAATCATGATTATCCTAAAGTAGGC
ATTTTTGCACAGCGCGGGAAAAATCGTCCGAATCGCATAGGAGCAACAATTGTAAAGGTAATGAAAAGAGAAGGTAAATC
AATTATTGTTGAGGGGTTAGATGCTATTGATGGCACCCCTATATTGGATATAAAGCCAATAATGAAAGAGTTTATGCCGA
GAGAAGAAATTGTACAGCCTAAATGGGCAACGGATATAATGAGACAGTATTGGAAGGGGAATGGAGTAAAATGA

Upstream 100 bases:

>100_bases
AAATAGATTATAATTATATTATGTAACCTAGTTCCTGTGTGTGGAAAACATTCAGAAAATATTTTATAATGTAAGTGGTT
ACATTTAAGGGGGAATGCGT

Downstream 100 bases:

>100_bases
GAATATATGAGGCAACAATTGCAGATTTAGATGGACTAGCATCAGTTTTTAATAACTATCGTATGTTTTATAGACAAGAC
TCTGATATAGAAGGAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MFSVQPIAFVHNERKEIKDDEWGEVRSYITLTEMYTEESIQGIEDFSHIEVVFYFHKVTDEQIQYVARHPRNNHDYPKVG
IFAQRGKNRPNRIGATIVKVMKREGKSIIVEGLDAIDGTPILDIKPIMKEFMPREEIVQPKWATDIMRQYWKGNGVK

Sequences:

>Translated_157_residues
MFSVQPIAFVHNERKEIKDDEWGEVRSYITLTEMYTEESIQGIEDFSHIEVVFYFHKVTDEQIQYVARHPRNNHDYPKVG
IFAQRGKNRPNRIGATIVKVMKREGKSIIVEGLDAIDGTPILDIKPIMKEFMPREEIVQPKWATDIMRQYWKGNGVK
>Mature_157_residues
MFSVQPIAFVHNERKEIKDDEWGEVRSYITLTEMYTEESIQGIEDFSHIEVVFYFHKVTDEQIQYVARHPRNNHDYPKVG
IFAQRGKNRPNRIGATIVKVMKREGKSIIVEGLDAIDGTPILDIKPIMKEFMPREEIVQPKWATDIMRQYWKGNGVK

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=104, Percent_Identity=40.3846153846154, Blast_Score=87, Evalue=8e-18,
Organism=Escherichia coli, GI1786393, Length=95, Percent_Identity=33.6842105263158, Blast_Score=66, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24586408, Length=95, Percent_Identity=38.9473684210526, Blast_Score=73, Evalue=8e-14,
Organism=Drosophila melanogaster, GI45552503, Length=95, Percent_Identity=38.9473684210526, Blast_Score=73, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 18423; Mature: 18423

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVQPIAFVHNERKEIKDDEWGEVRSYITLTEMYTEESIQGIEDFSHIEVVFYFHKVTD
CCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EQIQYVARHPRNNHDYPKVGIFAQRGKNRPNRIGATIVKVMKREGKSIIVEGLDAIDGTP
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHCCCCCC
ILDIKPIMKEFMPREEIVQPKWATDIMRQYWKGNGVK
CCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFSVQPIAFVHNERKEIKDDEWGEVRSYITLTEMYTEESIQGIEDFSHIEVVFYFHKVTD
CCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EQIQYVARHPRNNHDYPKVGIFAQRGKNRPNRIGATIVKVMKREGKSIIVEGLDAIDGTP
HHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHCCCCCC
ILDIKPIMKEFMPREEIVQPKWATDIMRQYWKGNGVK
CCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]