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The map label for this gene is yxjC [H]

Identifier: 52142556

GI number: 52142556

Start: 2802132

End: 2803568

Strand: Reverse

Name: yxjC [H]

Synonym: BCZK2686

Alternate gene names: 52142556

Gene position: 2803568-2802132 (Counterclockwise)

Preceding gene: 52142554

Following gene: 52142561

Centisome position: 52.89

GC content: 39.39

Gene sequence:

>1437_bases
ATGGATTTATTGATTGTATTGTTATCGCTTGGCTTGCTTATATTTGTAGCTTACCGAGGATTTTCAGTCATTCTATTCGC
TCCGTTATGTGCGTTGCTCGCTGTGCTTTTAACAGAACCAGCGTATGTATTACCGTTCTTTTCTAATGTTTTTATGGCGA
AGATGGTCGGATTCATAAAATTATATTTTCCTGTATTTTTGCTTGGAGCGATATTCGGTAAAGTGGTAGAAATCACTGGA
ATAGCAGAAAAAATCGCTAAAATTATTATCCGTTTTATCGGTGTGAAAAGAGCGATTCTTTCCATCGTATTAATGGGAGC
GATTCTTACATACAGTGGTGTCAGTTTATTTGTGGCGGTATTTGCGATTTATCCATTTGCAGCGCAATTATTTCGCGAGG
CAGATATTCCGAAACGACTTATTCCCGCGACCATCGCATTCAGTGCATTCACGTTTTCGATGGATTCGCTTCCTGGATCG
CCTCAAATCCAAAATGTTATTCCAACTACTTTTTTTAAGACAGACATTTATGCAGCTCCTACATTAGGAATTGTCGGAGC
GTTGTTTATCTTTATATGTGGCATGCTGTATTTGGAATGGTGTAGGAAGAAGGCTGCTGCTAAGGGAGAAGGGTACTTTG
GAAAAGGCGATGCCACTTCTGAACTTGCTGCCACAACTAGTGTACAACCAGTGCAAGCGACAATTGCTTCCAGCGATGTA
ATTCCAGCGAGTTACTGGGTAGCTTTTCTTCCGCTTGTATTGGTTGGAGTGATGAATAAAATCTTTACAGTATTCATTCC
TGTTTGGTATACAAAGGGATTTGATTTTACATCCATAGGTTTAAAGGAATATGGAACGATTGATATGGGACAAGTTATAG
GTATTTGGTCAGTGGAAATAGCACTTCTTATGGGAATACTGTCTGCTATAATATTAAATTTTCAAGCGGTAAAAGAACAT
TTTCAATCTATTACAAGCGTGGGCGTAAGTGGTTCAATCTTAGCTGCCATGAATACTGCAGCTGAGTATGGATTTGGTGC
TGTTATAGCAGCTTTACCTGGATTTGTTATGATTCAAAATTATTTGACGGGGACTTTCTCAAATCCTTTGATTAGCGGAG
CAGTTATGACGAATATCTTATGCGGACTGACGGGATCAGGCTCGGGCGGAATGAGTATTACATTAGGGTTAATGGCTGAA
AAATATATTGAAGCGGCAGCAAACTTTGATATTCCGTTAGATGTACTGCATCGTGTAATTGCAATGGCGGCGGGAGGTAT
GGATACTTTACCTCATAACGGAGCAGTTATAACTTTACTTGCGGTTACAGGATTAACGCATCGGGAAGCTTATAAAGAGA
TCTTTGGTATTACGATAATTAAGACACTTGCTGTATTCTTCGTTGTGGGAGTGTATATGATGTTTTCAATTGTATAG

Upstream 100 bases:

>100_bases
TATAACTTATAATATGCAAAAAGTAATGCCTGCCAGAAGCAGGCATTACAACGATATATACAAAGTAAAAAAATCCATAT
TATTGAGGGGGATTGGAGTT

Downstream 100 bases:

>100_bases
TAAGTAGGTTGAGTGTATGCTATAAATAACGCAGTTAGCGCTTTAAAATTATGAATAATGGTAAATAGAAAAAGGCAATA
CTACTAGTAGTATTGCCTTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MDLLIVLLSLGLLIFVAYRGFSVILFAPLCALLAVLLTEPAYVLPFFSNVFMAKMVGFIKLYFPVFLLGAIFGKVVEITG
IAEKIAKIIIRFIGVKRAILSIVLMGAILTYSGVSLFVAVFAIYPFAAQLFREADIPKRLIPATIAFSAFTFSMDSLPGS
PQIQNVIPTTFFKTDIYAAPTLGIVGALFIFICGMLYLEWCRKKAAAKGEGYFGKGDATSELAATTSVQPVQATIASSDV
IPASYWVAFLPLVLVGVMNKIFTVFIPVWYTKGFDFTSIGLKEYGTIDMGQVIGIWSVEIALLMGILSAIILNFQAVKEH
FQSITSVGVSGSILAAMNTAAEYGFGAVIAALPGFVMIQNYLTGTFSNPLISGAVMTNILCGLTGSGSGGMSITLGLMAE
KYIEAAANFDIPLDVLHRVIAMAAGGMDTLPHNGAVITLLAVTGLTHREAYKEIFGITIIKTLAVFFVVGVYMMFSIV

Sequences:

>Translated_478_residues
MDLLIVLLSLGLLIFVAYRGFSVILFAPLCALLAVLLTEPAYVLPFFSNVFMAKMVGFIKLYFPVFLLGAIFGKVVEITG
IAEKIAKIIIRFIGVKRAILSIVLMGAILTYSGVSLFVAVFAIYPFAAQLFREADIPKRLIPATIAFSAFTFSMDSLPGS
PQIQNVIPTTFFKTDIYAAPTLGIVGALFIFICGMLYLEWCRKKAAAKGEGYFGKGDATSELAATTSVQPVQATIASSDV
IPASYWVAFLPLVLVGVMNKIFTVFIPVWYTKGFDFTSIGLKEYGTIDMGQVIGIWSVEIALLMGILSAIILNFQAVKEH
FQSITSVGVSGSILAAMNTAAEYGFGAVIAALPGFVMIQNYLTGTFSNPLISGAVMTNILCGLTGSGSGGMSITLGLMAE
KYIEAAANFDIPLDVLHRVIAMAAGGMDTLPHNGAVITLLAVTGLTHREAYKEIFGITIIKTLAVFFVVGVYMMFSIV
>Mature_478_residues
MDLLIVLLSLGLLIFVAYRGFSVILFAPLCALLAVLLTEPAYVLPFFSNVFMAKMVGFIKLYFPVFLLGAIFGKVVEITG
IAEKIAKIIIRFIGVKRAILSIVLMGAILTYSGVSLFVAVFAIYPFAAQLFREADIPKRLIPATIAFSAFTFSMDSLPGS
PQIQNVIPTTFFKTDIYAAPTLGIVGALFIFICGMLYLEWCRKKAAAKGEGYFGKGDATSELAATTSVQPVQATIASSDV
IPASYWVAFLPLVLVGVMNKIFTVFIPVWYTKGFDFTSIGLKEYGTIDMGQVIGIWSVEIALLMGILSAIILNFQAVKEH
FQSITSVGVSGSILAAMNTAAEYGFGAVIAALPGFVMIQNYLTGTFSNPLISGAVMTNILCGLTGSGSGGMSITLGLMAE
KYIEAAANFDIPLDVLHRVIAMAAGGMDTLPHNGAVITLLAVTGLTHREAYKEIFGITIIKTLAVFFVVGVYMMFSIV

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 51224; Mature: 51224

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751 [H]