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The map label for this gene is yabE [H]

Identifier: 52142561

GI number: 52142561

Start: 2799554

End: 2801128

Strand: Reverse

Name: yabE [H]

Synonym: BCZK2684

Alternate gene names: 52142561

Gene position: 2801128-2799554 (Counterclockwise)

Preceding gene: 52142556

Following gene: 52142559

Centisome position: 52.84

GC content: 39.05

Gene sequence:

>1575_bases
ATGAAAAAAGTAATTGGTGCAGCAACAGCAACTGTTTTCGGATTGGGAGCATTTACTACAACTGCTACTGCAGAAACGAT
CGTAACAGCAGATGTACTCAACGTACGTGAAAAACCGACTACGGAATCAAAAGTTGTCGAAAAAGTAAAAAACGGGGAAG
AGTTAAAAGTCATCAATACCGAAGATGGCTGGTCAAAAATTGAGTTAAATGGTAAAGAAGTATTTGTAAGCGCGGAGTTT
ACTAAAGATATTTACCATGTAACAGCAGATTTGTTAAATGTACGTTCTGAATCAAACACAGAATCAAAAATTCTTGGCAG
ACTGAAAAAAGATGATGTAATTGAATCAACGAACCAAGTAAAAGACGGATGGCTACAATTTGAGTATAAGGGAAAAACAG
CTTATGTAAATGTTTCTTTCTTATCAAGTAAAGCACCAATTGAAAAAAAGGCTGACGAGAAAACGAAGCAAGTAGCGAAA
GTACAAAAATCGGTTAAAGCTAAGGAAGAAGCTAAAACACAGAAGATAACAAAGGCAAAAGAAACAATAAAACCTAAGGA
AGAAGTGAAAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGA
AAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAA
GAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGTAAAGCCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGT
AAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGTAAAACCTAAGGAAGAAGTGAAAGTGCAAGAAGTAGTAAAACCTA
AGGAAGAAGTGAAAGTACATGAAGTAGCGAAACCTAAGGAAGAAGTGAAAGTGCAAGAGATAGCCAAAGCTAAGGAAGAG
GCGAAAGCACAAGAAATAGCAAAGGCTAAGGAAGAGGCGAAAGCACAAGAAATAGCAAAGGCTAAGGAAGAAGCAAAGGC
GCAAGAGATAGCCAAAGCTAAAGAAGAAGCAAAAGCGCAAGAAATAGCCAAAGCTAAGGAAGAAGCGAAAGCACAAGAAA
TGGCAAAGGCTAAGGAAGAAGCAAAGGCACGAGAAATAGCAAAGGCTAAGGAAGAAGCGAAAGCACGAGAAATAGCCAAA
GCCAAGGAAGAGGAAAAAGCACGAGAAGCACTAAAGGCAAAAGAAGAGTCTAAAAATAACGTGCAGTCTGCTAAACGTGA
ATTAACGGTGGTGGCGACAGCATATACTGCTGATCCGAGTGAGAATGGTACATATGGTGGACGCGTTTTAACTGCGATGG
GGCATGATTTAACGGCTAATCCGAATATGAGAATTATCGCAGTAGATCCGAAAGTAATCCCATTAGGATCTAAAGTATGG
GTAGAAGGTTATGGAGAAGCAATCGCTGGAGATACCGGAAGTGCAATTAAAGGTAATCGCATTGATGTATTAATGGGTTC
AAAAAGTAAAGCGATGAATTGGGGAAGACAAACAGTTAAAGTGAAGATTTTATAA

Upstream 100 bases:

>100_bases
ATATTAAATGGTATCAATATACTGTTGCGAATGCTTTTATTAAATCTCTTGATTTGATGGAAGTATTTGATAGAATTCAA
AAAATATAATGGAGGTTAAT

Downstream 100 bases:

>100_bases
TAAATCTAGAATATAACATAATGAAAATAAGACTGACATATTCTGTCGGTCTTATTTTCGTACCATAACATCATTAAGAA
TCGCATCAAATATATCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSAEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVHEVAKPKEEVKVQEIAKAKEE
AKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEMAKAKEEAKAREIAKAKEEAKAREIAK
AKEEEKAREALKAKEESKNNVQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVW
VEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL

Sequences:

>Translated_524_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSAEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVHEVAKPKEEVKVQEIAKAKEE
AKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEMAKAKEEAKAREIAKAKEEAKAREIAK
AKEEEKAREALKAKEESKNNVQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVW
VEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL
>Mature_524_residues
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSAEF
TKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAK
VQKSVKAKEEAKTQKITKAKETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
EVAKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVHEVAKPKEEVKVQEIAKAKEE
AKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEMAKAKEEAKAREIAKAKEEAKAREIAK
AKEEEKAREALKAKEESKNNVQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVW
VEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 57938; Mature: 57938

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
EDGWSKIELNGKEVFVSAEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQV
CCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAKVQKSVKAKEEAKTQKITKAK
CCCEEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
HHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVH
HHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAQEMAKAKEEAKAREIAKAKEEAKAREIAKAKEEEKAREALKAKEESKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVW
HHHHHHHEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEEEECCCEEE
VEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL
ECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MKKVIGAATATVFGLGAFTTTATAETIVTADVLNVREKPTTESKVVEKVKNGEELKVINT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
EDGWSKIELNGKEVFVSAEFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQV
CCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KDGWLQFEYKGKTAYVNVSFLSSKAPIEKKADEKTKQVAKVQKSVKAKEEAKTQKITKAK
CCCEEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETIKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQEVAKPKEEVKVQ
HHCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVQEVVKPKEEVKVH
HHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
EVAKPKEEVKVQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQEIAKAKEEAKAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIAKAKEEAKAQEMAKAKEEAKAREIAKAKEEAKAREIAKAKEEEKAREALKAKEESKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQSAKRELTVVATAYTADPSENGTYGGRVLTAMGHDLTANPNMRIIAVDPKVIPLGSKVW
HHHHHHHEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEEEECCCEEE
VEGYGEAIAGDTGSAIKGNRIDVLMGSKSKAMNWGRQTVKVKIL
ECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]