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The map label for this gene is cueR [H]

Identifier: 52142175

GI number: 52142175

Start: 3195030

End: 3195437

Strand: Reverse

Name: cueR [H]

Synonym: BCZK3067

Alternate gene names: 52142175

Gene position: 3195437-3195030 (Counterclockwise)

Preceding gene: 52142169

Following gene: 52142176

Centisome position: 60.28

GC content: 37.5

Gene sequence:

>408_bases
GTGTATCGAATCGGACAGTTGGCTCTCATGGCTCACGTGTCGAAACGAACGATTGATTATTATACGAATCTAGGTATCTT
AAAAGCGGAGCGATCTCAATCTAATTATCGCTATTACGACGAAACAGCATTTGAAACATTACAATTTATTGAGAAGTGCA
AAGAAATGCATATGCCGCTTTGTGAGATTAAAGAGAAAATCGAGGAGAAGAAGAAGCTGCTCGGTATCAATGAACACGTT
TCGAAACAAGTGAATGAAGTGACAGACCATATTCATCGATTAGAAGCAGAGTTAACAGAGTTAAAGCCGCTTTTAGATGG
ATTGACTGATTCACAACGTGAAAAAATATCGAAATCTTTATCTGGTCAAACGACAGCTTTAATACAGACACTTGCTCTAT
TATTATAG

Upstream 100 bases:

>100_bases
TTTGTATAAATTATGAATAATAAACCGTCACGTTTGACTGTACAGTTTATGTGTTGTATGATGTTAGTAATATAAACAAG
GGGGGAAGATCGTTGGGAAG

Downstream 100 bases:

>100_bases
AAAAAGTGAAATCCGACCTCTTTAATTTTTGTATCGGGCTATGTTTTCTAAGAAACAAATAAGAAAACATTATAGTATAC
AGGAGGTGGACACCTTAGTT

Product: MerR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MYRIGQLALMAHVSKRTIDYYTNLGILKAERSQSNYRYYDETAFETLQFIEKCKEMHMPLCEIKEKIEEKKKLLGINEHV
SKQVNEVTDHIHRLEAELTELKPLLDGLTDSQREKISKSLSGQTTALIQTLALLL

Sequences:

>Translated_135_residues
MYRIGQLALMAHVSKRTIDYYTNLGILKAERSQSNYRYYDETAFETLQFIEKCKEMHMPLCEIKEKIEEKKKLLGINEHV
SKQVNEVTDHIHRLEAELTELKPLLDGLTDSQREKISKSLSGQTTALIQTLALLL
>Mature_135_residues
MYRIGQLALMAHVSKRTIDYYTNLGILKAERSQSNYRYYDETAFETLQFIEKCKEMHMPLCEIKEKIEEKKKLLGINEHV
SKQVNEVTDHIHRLEAELTELKPLLDGLTDSQREKISKSLSGQTTALIQTLALLL

Specific function: Transcriptional activator of the copZA operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 15653; Mature: 15653

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRIGQLALMAHVSKRTIDYYTNLGILKAERSQSNYRYYDETAFETLQFIEKCKEMHMPL
CCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
CEIKEKIEEKKKLLGINEHVSKQVNEVTDHIHRLEAELTELKPLLDGLTDSQREKISKSL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SGQTTALIQTLALLL
CCHHHHHHHHHHHHC
>Mature Secondary Structure
MYRIGQLALMAHVSKRTIDYYTNLGILKAERSQSNYRYYDETAFETLQFIEKCKEMHMPL
CCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
CEIKEKIEEKKKLLGINEHVSKQVNEVTDHIHRLEAELTELKPLLDGLTDSQREKISKSL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SGQTTALIQTLALLL
CCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]