Click here to switch to the map view.

The map label for this gene is nudF [H]

Identifier: 52141916

GI number: 52141916

Start: 3461133

End: 3461576

Strand: Reverse

Name: nudF [H]

Synonym: BCZK3327

Alternate gene names: 52141916

Gene position: 3461576-3461133 (Counterclockwise)

Preceding gene: 52141915

Following gene: 52141919

Centisome position: 65.3

GC content: 34.68

Gene sequence:

>444_bases
ATGGAAAATGTAATGCAAGTTCGTGTTACTGGAATTTTAATTGAAGATGAAAAAGTATTGCTAGTAAAGCAAAAAGTTGC
TAATCGGAATTGGTCTTTACCTGGAGGAAGAGCAGAGAATGGCGAAACGTTAGAGGAAGCAATGATTCGAGAAATGAGAG
AAGAGACAGGGTTAGAAATTAATATTCAGAAGCTACTCTATGTTTGTGATAAACCAGATGCACGCCCGTCTTTATTACAT
ATAACGTTTTTGCTTGAAAGGATTGAAGGTGAAATTACGCTACCTTCTAACGAGTTTGATCATAATCCAATTTATGATGT
GCAAATGATACCGATTAAAAATTTAAGTCAGTATGGTTTTTCGGAAACTTTTATCTCTCTTATAAGTGAAGGTTTTCTAA
ATGCGGGGAGTTATCAAGGGTTAAAACGAAATATAGGCCTATAA

Upstream 100 bases:

>100_bases
GTAACAACTTCTTTCTTCCATAATTTTCTTTAATTATAAAACATACGTTCCTTTTGTGGAAGGATTTATTTGTAAATTTA
ATAGGAAGAGGAGATTGTAT

Downstream 100 bases:

>100_bases
ATATAGTGGAAGGATAGCCGTTAGCTATCCTTCATAAACAGGTTTTAGACTGCTGACTGTAAAGAAGAAATAAGTTGATT
TAAAAACTCATCCCCGCTCA

Product: MutT/Nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRAENGETLEEAMIREMREETGLEINIQKLLYVCDKPDARPSLLH
ITFLLERIEGEITLPSNEFDHNPIYDVQMIPIKNLSQYGFSETFISLISEGFLNAGSYQGLKRNIGL

Sequences:

>Translated_147_residues
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRAENGETLEEAMIREMREETGLEINIQKLLYVCDKPDARPSLLH
ITFLLERIEGEITLPSNEFDHNPIYDVQMIPIKNLSQYGFSETFISLISEGFLNAGSYQGLKRNIGL
>Mature_147_residues
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRAENGETLEEAMIREMREETGLEINIQKLLYVCDKPDARPSLLH
ITFLLERIEGEITLPSNEFDHNPIYDVQMIPIKNLSQYGFSETFISLISEGFLNAGSYQGLKRNIGL

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 16737; Mature: 16737

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRAENGETLEEAMIREMREETGLEI
CCCCEEEEEEEEEECCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
NIQKLLYVCDKPDARPSLLHITFLLERIEGEITLPSNEFDHNPIYDVQMIPIKNLSQYGF
EHHHEEEECCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEECCCCCCCCCH
SETFISLISEGFLNAGSYQGLKRNIGL
HHHHHHHHHHHHCCCCCCCCHHHCCCC
>Mature Secondary Structure
MENVMQVRVTGILIEDEKVLLVKQKVANRNWSLPGGRAENGETLEEAMIREMREETGLEI
CCCCEEEEEEEEEECCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
NIQKLLYVCDKPDARPSLLHITFLLERIEGEITLPSNEFDHNPIYDVQMIPIKNLSQYGF
EHHHEEEECCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEECCCCCCCCCH
SETFISLISEGFLNAGSYQGLKRNIGL
HHHHHHHHHHHHCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]