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The map label for this gene is ccdC [H]

Identifier: 52141879

GI number: 52141879

Start: 3503909

End: 3504415

Strand: Reverse

Name: ccdC [H]

Synonym: BCZK3366

Alternate gene names: 52141879

Gene position: 3504415-3503909 (Counterclockwise)

Preceding gene: 52141876

Following gene: 52141887

Centisome position: 66.11

GC content: 34.32

Gene sequence:

>507_bases
ATGAACATAGTTGTTTTATCTAGTATCGTTGCTGTTTGTATGGCTGTTGGTGCGATGTTTATTCGTTTAAAAGCAGCTAA
GAAACCTGCAACATTGAAAAAAATTATACTTCCGCCATTCTTTATGAGCACGGGGGCATTGATGTATGTTTTTCCTGAAT
TTCGATTAACTCCAGCAGAAATGTTAGAAGCAATTGGCGTCGGTTTGTTTTTCTCTATTTTTCTTATTAAAACATCTAAA
TTTGAAATTAGAGGACAAGAGATTTACTTGAAGCGTTCGAAAGCATTTGTCTTTATTTTAATCGGATTACTTGTCGTGCG
AATTGTATTTAAAACATACTTAAGTCAATCTCTTGATTTAGGACAACTTAGTGGCATGTTCTTCTTACTGGCGTTCGCGA
TGATTGTGTCATGGAGAATCGCGATGTACCGTTCCTTTACGAAATTACAGAAGGAAATGGAAAAAGAAGACGGTTTTTAT
AATGAAAAAGATATGAAACTAACTTAA

Upstream 100 bases:

>100_bases
TGGTTTTTAGTATTATTCTGTGAAAATGTTGGAAATACTAACGGAAAAGCATATAATGAAAGTATATTTTGCATATAGCC
ACAAAAAAGGATGAGAAAAT

Downstream 100 bases:

>100_bases
AAACTGTATATGTATAAGATAAAAAGACAGCGTTTTTTTGACGCTGTCTTTTTATCTATATTGTTAACACCTTCTATCCC
AGCCGCGACGTATAAAACGT

Product: cyotchrome c defective protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MNIVVLSSIVAVCMAVGAMFIRLKAAKKPATLKKIILPPFFMSTGALMYVFPEFRLTPAEMLEAIGVGLFFSIFLIKTSK
FEIRGQEIYLKRSKAFVFILIGLLVVRIVFKTYLSQSLDLGQLSGMFFLLAFAMIVSWRIAMYRSFTKLQKEMEKEDGFY
NEKDMKLT

Sequences:

>Translated_168_residues
MNIVVLSSIVAVCMAVGAMFIRLKAAKKPATLKKIILPPFFMSTGALMYVFPEFRLTPAEMLEAIGVGLFFSIFLIKTSK
FEIRGQEIYLKRSKAFVFILIGLLVVRIVFKTYLSQSLDLGQLSGMFFLLAFAMIVSWRIAMYRSFTKLQKEMEKEDGFY
NEKDMKLT
>Mature_168_residues
MNIVVLSSIVAVCMAVGAMFIRLKAAKKPATLKKIILPPFFMSTGALMYVFPEFRLTPAEMLEAIGVGLFFSIFLIKTSK
FEIRGQEIYLKRSKAFVFILIGLLVVRIVFKTYLSQSLDLGQLSGMFFLLAFAMIVSWRIAMYRSFTKLQKEMEKEDGFY
NEKDMKLT

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009916 [H]

Pfam domain/function: PF07301 DUF1453 [H]

EC number: NA

Molecular weight: Translated: 19185; Mature: 19185

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVVLSSIVAVCMAVGAMFIRLKAAKKPATLKKIILPPFFMSTGALMYVFPEFRLTPAE
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCEEEECCCCCCCHHH
MLEAIGVGLFFSIFLIKTSKFEIRGQEIYLKRSKAFVFILIGLLVVRIVFKTYLSQSLDL
HHHHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GQLSGMFFLLAFAMIVSWRIAMYRSFTKLQKEMEKEDGFYNEKDMKLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNIVVLSSIVAVCMAVGAMFIRLKAAKKPATLKKIILPPFFMSTGALMYVFPEFRLTPAE
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCEEEECCCCCCCHHH
MLEAIGVGLFFSIFLIKTSKFEIRGQEIYLKRSKAFVFILIGLLVVRIVFKTYLSQSLDL
HHHHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
GQLSGMFFLLAFAMIVSWRIAMYRSFTKLQKEMEKEDGFYNEKDMKLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]