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The map label for this gene is ydhB [H]

Identifier: 52141866

GI number: 52141866

Start: 3513805

End: 3514542

Strand: Reverse

Name: ydhB [H]

Synonym: BCZK3379

Alternate gene names: 52141866

Gene position: 3514542-3513805 (Counterclockwise)

Preceding gene: 52141867

Following gene: 52141869

Centisome position: 66.3

GC content: 36.18

Gene sequence:

>738_bases
ATGTTAGTAATGGGAGTTTTATTAGGATTTGTTGGAGCTGGGGGAGCTGGGTTTATTATCGCGATACTCACGTTAGTATT
CCATATTCCTATTCACGTTGCACTTGCAACGTCTTTAACTGCTATGGCATTTACGACATTATCTGGGGTTATAAGTCATT
ATCGTGAAGGAAATGTAGTACTTACTATAGGCGGGATTGTTGGTGGATGTGGGGCATTTGGTTCTTATATCGGTTCCAAA
ATTGGCTCGCTTATACCACCGTATCTTCTTCATTGGTTTACAGCTGGGATGTTATTTTTATCTGCGATTTTTATGTGTAT
TAAATTAATTAAATTTCAAAATGAGAAAGAAGTACGTTTAGTAAAAATCAAAGATATTTCGAAAGAAAACATAATGAAAT
GTATATGTCTTGGGTTAGTCACTGGAATGATGGCTGGTTCATTCGGGATTGGTTCTGCACCATTTATTCAACTTGGATTA
ATGGTTCTATTAGGATTGACGATTCAGCAATCTGTAGGAACAACAATGCTTGTTATATTGCCGATTGCGATTGGGGGTGG
GTTAGGATATAGTTCAGAAGGGTATCTAGATTATATATTATTATTGCAAGTATTAATTGGGACGATGTTAGGAGCTTATA
TCGGTGCGAAGTTTACAAATTATGCACCACGTATGCTTTTGAAGTTTTCAATGATTATGACACCAGTTTTCGCTGGATGT
ATGTTATTAATGGAATGA

Upstream 100 bases:

>100_bases
CGAAAAGCATCCTTCCAGGGTGCTTTTTATTTGTATGCAAGGAAGAAGATGGTGGATAATTGGATTACTGGAGGGAGAGT
ATGTGGCAATTATTATAACG

Downstream 100 bases:

>100_bases
AAATAATATAGCAAACTAATATGTTTTACGAATGAATTATGTAAGTAATTCATATTTCCCATATAAAAGGATTTGTTTTA
ATATAATGAGTGTAAAGTTC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSK
IGSLIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEKEVRLVKIKDISKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGL
MVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGC
MLLME

Sequences:

>Translated_245_residues
MLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSK
IGSLIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEKEVRLVKIKDISKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGL
MVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGC
MLLME
>Mature_245_residues
MLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSK
IGSLIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEKEVRLVKIKDISKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGL
MVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTPVFAGC
MLLME

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 25976; Mature: 25976

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCC
>Mature Secondary Structure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HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]