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The map label for this gene is ydbA [H]

Identifier: 52140871

GI number: 52140871

Start: 4487680

End: 4488513

Strand: Reverse

Name: ydbA [H]

Synonym: BCZK4379

Alternate gene names: 52140871

Gene position: 4488513-4487680 (Counterclockwise)

Preceding gene: 52140870

Following gene: 52140874

Centisome position: 84.67

GC content: 37.41

Gene sequence:

>834_bases
ATGCGATCGAAGCGAGAACAAGCCATTTTAGACAGTATAAAAGAATGGGAATCGCAATTAGTTGAGCAAGAAGCGACCGA
TTTTCAAAGAATGTTTGATAAATGGGTACATAATACAATTGCGAAATTACCTGAGAAAAAACGAAAAGATTTCTTTACGA
AAGCAGATGGATGGCTCTTTCATTTGCATGCATTGATTCAAAGCTCACAATCACAGTTAGAGGCGCGTAATCGTATTTTA
GGAACATCGAGATTATTTAATGAATCGATTGAGCAACTAGAAGATTTAAAAGCATTATCTATCGATCAATTAACATACAT
AGCAGAGCAGCAAACAGCTCGCCATCGTCTATATTCATTCGTACAAGGCGGAGCAACAGGTGCTGGAGGTTTATTATTAT
TAACGGCTGATTTTCCGGTTATGATTGCGTTAAATGTGAAGGCTGTCCAACTTATTGCAACATCATTTGGACATGATGTG
AACAAGCCTTATGAAATGATGCTTGCGTTAAAGGTATTTCATGCATCATTACTACCAGGAAGACTTCAGCAATACGCTTG
GTACAATTTACTGCAAGAGCTAGAACAAGAAGATTCCTTCTTCTACGAAGGAGACGAAGCGGTGTTACAACCAGCTTCTA
CTGAAATCATCTTAAAACAAATTTTGAAAACATTCTCGATTTATGCTCTTCGTCGTAAATTATTCCAAGGTATTCCGGTA
ATTGGAATGGCGATCGGGTCTACAGTGAATTATCGTTTAACAAGAAACGTTACTGAATTTGCAAATAGATTTTATCAAGT
GCGCCACATAGTCGAGAAGGAAAAAAGAGCATAA

Upstream 100 bases:

>100_bases
CATGAACGCCGATATATGCTATAAATAAGGGAGACACGATATACAAGCGCATTTGCAAATATGTTACAATAGAAAAAAAT
CGAACGAGGTGGTTGTTACG

Downstream 100 bases:

>100_bases
AAAAAGCGAGAGGCCGAGGCCTTTCGCTTTTTTAATTCGTTGCATGCTTTTTGGACATTGGAATAGATACTGGTTGCTTT
TCTTCTGCTTTCTCTGTTTT

Product: protein ecsC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRSKREQAILDSIKEWESQLVEQEATDFQRMFDKWVHNTIAKLPEKKRKDFFTKADGWLFHLHALIQSSQSQLEARNRIL
GTSRLFNESIEQLEDLKALSIDQLTYIAEQQTARHRLYSFVQGGATGAGGLLLLTADFPVMIALNVKAVQLIATSFGHDV
NKPYEMMLALKVFHASLLPGRLQQYAWYNLLQELEQEDSFFYEGDEAVLQPASTEIILKQILKTFSIYALRRKLFQGIPV
IGMAIGSTVNYRLTRNVTEFANRFYQVRHIVEKEKRA

Sequences:

>Translated_277_residues
MRSKREQAILDSIKEWESQLVEQEATDFQRMFDKWVHNTIAKLPEKKRKDFFTKADGWLFHLHALIQSSQSQLEARNRIL
GTSRLFNESIEQLEDLKALSIDQLTYIAEQQTARHRLYSFVQGGATGAGGLLLLTADFPVMIALNVKAVQLIATSFGHDV
NKPYEMMLALKVFHASLLPGRLQQYAWYNLLQELEQEDSFFYEGDEAVLQPASTEIILKQILKTFSIYALRRKLFQGIPV
IGMAIGSTVNYRLTRNVTEFANRFYQVRHIVEKEKRA
>Mature_277_residues
MRSKREQAILDSIKEWESQLVEQEATDFQRMFDKWVHNTIAKLPEKKRKDFFTKADGWLFHLHALIQSSQSQLEARNRIL
GTSRLFNESIEQLEDLKALSIDQLTYIAEQQTARHRLYSFVQGGATGAGGLLLLTADFPVMIALNVKAVQLIATSFGHDV
NKPYEMMLALKVFHASLLPGRLQQYAWYNLLQELEQEDSFFYEGDEAVLQPASTEIILKQILKTFSIYALRRKLFQGIPV
IGMAIGSTVNYRLTRNVTEFANRFYQVRHIVEKEKRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31974; Mature: 31974

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKREQAILDSIKEWESQLVEQEATDFQRMFDKWVHNTIAKLPEKKRKDFFTKADGWLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH
HLHALIQSSQSQLEARNRILGTSRLFNESIEQLEDLKALSIDQLTYIAEQQTARHRLYSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGGATGAGGLLLLTADFPVMIALNVKAVQLIATSFGHDVNKPYEMMLALKVFHASLLPG
HHCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHH
RLQQYAWYNLLQELEQEDSFFYEGDEAVLQPASTEIILKQILKTFSIYALRRKLFQGIPV
HHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IGMAIGSTVNYRLTRNVTEFANRFYQVRHIVEKEKRA
HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSKREQAILDSIKEWESQLVEQEATDFQRMFDKWVHNTIAKLPEKKRKDFFTKADGWLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH
HLHALIQSSQSQLEARNRILGTSRLFNESIEQLEDLKALSIDQLTYIAEQQTARHRLYSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGGATGAGGLLLLTADFPVMIALNVKAVQLIATSFGHDVNKPYEMMLALKVFHASLLPG
HHCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHH
RLQQYAWYNLLQELEQEDSFFYEGDEAVLQPASTEIILKQILKTFSIYALRRKLFQGIPV
HHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IGMAIGSTVNYRLTRNVTEFANRFYQVRHIVEKEKRA
HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]