Click here to switch to the map view.

The map label for this gene is sdpI [H]

Identifier: 52140669

GI number: 52140669

Start: 4671039

End: 4671674

Strand: Reverse

Name: sdpI [H]

Synonym: BCZK4585

Alternate gene names: 52140669

Gene position: 4671674-4671039 (Counterclockwise)

Preceding gene: 52140667

Following gene: 52140671

Centisome position: 88.13

GC content: 33.18

Gene sequence:

>636_bases
ATGAGGAAGCATCTTTTTGCAATAATATTAATTGTTACAACTTGTTTAGCTTGGGCGTTTGCTTGGCCGCATTTGCCGGA
TACAATTGCAACGCATTGGAGCGGCGGAAAGGTAGATGGCTATTCTTCTAAATTTTACGGAATGATTTCTATGGTCGGAA
TTATGATGGCATTATATATATTTCTAAATGTGATACCAAAGATTGATCCAAGGAAAGCAAATTACGATAAATTTTCTAAA
GCCTTTATGATGATGAATAATGGGGTACTATTACTACTATTTGTAGGGAATATAGATATTATTACAAGTGGATTAGGATA
CAACTTATTCATTAATCGTGTGCCGGAATTATTAGTTGGTGTTTTATTTTTAGTAATGGGTAATTATTTACCACAGTGTA
AGCCAAACTTTTTTGTCGGGATGCGTAATCCATGGACGTTAAGTAATGAAGAAGTATGGCGCAAAACACATCGGTTTAGC
GGAAAAGTATTTGTGGTTTTAGGAATTATTATGATTATAAGTGTTTTCGCTCCGGCTGATTGGAGATCTTATATGATGCT
TGGGATTATAGTAGTTGCTGTTATTATAACAAATTTATATTCTTACGTTTTGTATAAAAAAGAAATACAATTGTGA

Upstream 100 bases:

>100_bases
AAAAGAAAGGCCAATTCGTTGTGTACTCTTTAAACACAACTGTCTTTCAAGATTTATTAACTTGGGTGTTTACGTTTACG
AATAAGGGGGAAGAGGGGAA

Downstream 100 bases:

>100_bases
GCTATATTAATCAAATTTTATAGTTATAGTTTCTATGTGTTAAGAGATTTTAATACTCAGTGGGGATAATGAAAAGCACA
CTGAGTAAATTTTTTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRKHLFAIILIVTTCLAWAFAWPHLPDTIATHWSGGKVDGYSSKFYGMISMVGIMMALYIFLNVIPKIDPRKANYDKFSK
AFMMMNNGVLLLLFVGNIDIITSGLGYNLFINRVPELLVGVLFLVMGNYLPQCKPNFFVGMRNPWTLSNEEVWRKTHRFS
GKVFVVLGIIMIISVFAPADWRSYMMLGIIVVAVIITNLYSYVLYKKEIQL

Sequences:

>Translated_211_residues
MRKHLFAIILIVTTCLAWAFAWPHLPDTIATHWSGGKVDGYSSKFYGMISMVGIMMALYIFLNVIPKIDPRKANYDKFSK
AFMMMNNGVLLLLFVGNIDIITSGLGYNLFINRVPELLVGVLFLVMGNYLPQCKPNFFVGMRNPWTLSNEEVWRKTHRFS
GKVFVVLGIIMIISVFAPADWRSYMMLGIIVVAVIITNLYSYVLYKKEIQL
>Mature_211_residues
MRKHLFAIILIVTTCLAWAFAWPHLPDTIATHWSGGKVDGYSSKFYGMISMVGIMMALYIFLNVIPKIDPRKANYDKFSK
AFMMMNNGVLLLLFVGNIDIITSGLGYNLFINRVPELLVGVLFLVMGNYLPQCKPNFFVGMRNPWTLSNEEVWRKTHRFS
GKVFVVLGIIMIISVFAPADWRSYMMLGIIVVAVIITNLYSYVLYKKEIQL

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012867 [H]

Pfam domain/function: PF07853 DUF1648 [H]

EC number: NA

Molecular weight: Translated: 24105; Mature: 24105

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHLFAIILIVTTCLAWAFAWPHLPDTIATHWSGGKVDGYSSKFYGMISMVGIMMALYI
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLNVIPKIDPRKANYDKFSKAFMMMNNGVLLLLFVGNIDIITSGLGYNLFINRVPELLVG
HHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHH
VLFLVMGNYLPQCKPNFFVGMRNPWTLSNEEVWRKTHRFSGKVFVVLGIIMIISVFAPAD
HHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
WRSYMMLGIIVVAVIITNLYSYVLYKKEIQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKHLFAIILIVTTCLAWAFAWPHLPDTIATHWSGGKVDGYSSKFYGMISMVGIMMALYI
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLNVIPKIDPRKANYDKFSKAFMMMNNGVLLLLFVGNIDIITSGLGYNLFINRVPELLVG
HHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHH
VLFLVMGNYLPQCKPNFFVGMRNPWTLSNEEVWRKTHRFSGKVFVVLGIIMIISVFAPAD
HHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
WRSYMMLGIIVVAVIITNLYSYVLYKKEIQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]