| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894443
Identifier: 51894443
GI number: 51894443
Start: 3535397
End: 3536314
Strand: Reverse
Name: 51894443
Synonym: STH3309
Alternate gene names: NA
Gene position: 3536314-3535397 (Counterclockwise)
Preceding gene: 51894444
Following gene: 51894442
Centisome position: 99.16
GC content: 69.93
Gene sequence:
>918_bases ATGAAAGGCCAACGCGTCGTGTGGCGGCTGCTCTCCGCCGTGGTGGCCGGCGCCCTCCTGCTCTGCGGGCTGGCGGGATG GCCCAGGGCACGGGCAGCCGTCTACCGTTATTACCGCCACCAGGGGAGGGTGCGGACCCTGGGCGGGCTGGCCGGATACC GTACCGCCGAATCGGGCCGGTTCGTCCTGTATTATCTGCCGGAGGACGGCGACCTCGCGGCGCTGATCCTGGAACAGGCC GAGGCGGTGTACGAACGGGTGGTGGCGGAGGTGGGATACCCGCCTGCGGAGCGGGTGCCCCTGATCCTCTACCCTGACCG GACGGCGCTGCGCGCGGCCTACGGCTGGGGCTCGGAGCAGAGCGCCGTGGGGGTCTACTGGCGCGGCACCGTAGGGTTAC TGTCGCCGCGGGTGTGGATCGCGGCCGGCGACCCGGCCGAACTGGCGAGCGAGTTCCGCCGGTTGAGCCCGGTCGCCCAT GAGCTGACCCATTACCTGCTAGATGAGCTGACCGAGGGCAACTATCCCCGCTGGTTCACCGAGGGGCTCGCCCAGTACGT GGAAGAGCTGGCGACGGGCTACGTGTGGCCGGAGGCCGCCGCGGCTCCGCTGGACCCGCCGCTGTACACCCTGTCTGAGC TCACCCGGCGGTTCGACGACCTGCCCGACCGGCCTCTGGCCTACCGCCAGAGCCATCTGCTGGTGGCTCACATCGCGGAG GCGCACGGGCGGCCGGGGCTCACCGGGCTCATTGCCCTCCTGGCCGAGGGCGTGCCCTTTGACCGGGCGGTGGAGACCGC CCTGGGGCGCAGCATGGCATCGATCTATGCCGACTGGCTGGATCAGGCCGAAGGGCGTTCCGCACAGGGAAGGAACGTAC GCCTTTCGGAGCGAAAAGGCCTGCTGGAAGAGAGATAA
Upstream 100 bases:
>100_bases TTTGCTTTGCCTGCCAAAGTCTGCGGATGGTTGCTGCGCAACGCTTCATCTATACTAGACTATGCTAACACGCAATCTTA TCTGCTTAGGGGTTTATGGT
Downstream 100 bases:
>100_bases GGAGAGGACGTTATGGCCGATCGCATCCTGGTCGTGGACGATGAACGCCCTATTGCCGAAATCCTGAAGTTCAGCTTCGA ACGCGAGGGTTTTGAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKGQRVVWRLLSAVVAGALLLCGLAGWPRARAAVYRYYRHQGRVRTLGGLAGYRTAESGRFVLYYLPEDGDLAALILEQA EAVYERVVAEVGYPPAERVPLILYPDRTALRAAYGWGSEQSAVGVYWRGTVGLLSPRVWIAAGDPAELASEFRRLSPVAH ELTHYLLDELTEGNYPRWFTEGLAQYVEELATGYVWPEAAAAPLDPPLYTLSELTRRFDDLPDRPLAYRQSHLLVAHIAE AHGRPGLTGLIALLAEGVPFDRAVETALGRSMASIYADWLDQAEGRSAQGRNVRLSERKGLLEER
Sequences:
>Translated_305_residues MKGQRVVWRLLSAVVAGALLLCGLAGWPRARAAVYRYYRHQGRVRTLGGLAGYRTAESGRFVLYYLPEDGDLAALILEQA EAVYERVVAEVGYPPAERVPLILYPDRTALRAAYGWGSEQSAVGVYWRGTVGLLSPRVWIAAGDPAELASEFRRLSPVAH ELTHYLLDELTEGNYPRWFTEGLAQYVEELATGYVWPEAAAAPLDPPLYTLSELTRRFDDLPDRPLAYRQSHLLVAHIAE AHGRPGLTGLIALLAEGVPFDRAVETALGRSMASIYADWLDQAEGRSAQGRNVRLSERKGLLEER >Mature_305_residues MKGQRVVWRLLSAVVAGALLLCGLAGWPRARAAVYRYYRHQGRVRTLGGLAGYRTAESGRFVLYYLPEDGDLAALILEQA EAVYERVVAEVGYPPAERVPLILYPDRTALRAAYGWGSEQSAVGVYWRGTVGLLSPRVWIAAGDPAELASEFRRLSPVAH ELTHYLLDELTEGNYPRWFTEGLAQYVEELATGYVWPEAAAAPLDPPLYTLSELTRRFDDLPDRPLAYRQSHLLVAHIAE AHGRPGLTGLIALLAEGVPFDRAVETALGRSMASIYADWLDQAEGRSAQGRNVRLSERKGLLEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33831; Mature: 33831
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGQRVVWRLLSAVVAGALLLCGLAGWPRARAAVYRYYRHQGRVRTLGGLAGYRTAESGR CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEHHCHHCCCCCCCCC FVLYYLPEDGDLAALILEQAEAVYERVVAEVGYPPAERVPLILYPDRTALRAAYGWGSEQ EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCHHHHHHHCCCCCC SAVGVYWRGTVGLLSPRVWIAAGDPAELASEFRRLSPVAHELTHYLLDELTEGNYPRWFT CCEEEEECCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EGLAQYVEELATGYVWPEAAAAPLDPPLYTLSELTRRFDDLPDRPLAYRQSHLLVAHIAE HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AHGRPGLTGLIALLAEGVPFDRAVETALGRSMASIYADWLDQAEGRSAQGRNVRLSERKG HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCC LLEER CCCCC >Mature Secondary Structure MKGQRVVWRLLSAVVAGALLLCGLAGWPRARAAVYRYYRHQGRVRTLGGLAGYRTAESGR CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEHHCHHCCCCCCCCC FVLYYLPEDGDLAALILEQAEAVYERVVAEVGYPPAERVPLILYPDRTALRAAYGWGSEQ EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCHHHHHHHCCCCCC SAVGVYWRGTVGLLSPRVWIAAGDPAELASEFRRLSPVAHELTHYLLDELTEGNYPRWFT CCEEEEECCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EGLAQYVEELATGYVWPEAAAAPLDPPLYTLSELTRRFDDLPDRPLAYRQSHLLVAHIAE HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AHGRPGLTGLIALLAEGVPFDRAVETALGRSMASIYADWLDQAEGRSAQGRNVRLSERKG HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCC LLEER CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA