| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yaaT [H]
Identifier: 51894390
GI number: 51894390
Start: 3474593
End: 3475873
Strand: Reverse
Name: yaaT [H]
Synonym: STH3255
Alternate gene names: 51894390
Gene position: 3475873-3474593 (Counterclockwise)
Preceding gene: 51894391
Following gene: 51894389
Centisome position: 97.47
GC content: 70.26
Gene sequence:
>1281_bases GTGGTCTGTGTTGTAGGCGTGCGTTTCAAGCTGGCCGGGAAGGTATACTACTTCGATCCCGGTGAGCTGCCCGTCGCCCA GGGAGATCGGGTCATTGTGGAGACGGTCAGGGGGGTGGAGTACGGCGAGGTCGTCGTCGGGCCCAAGATGGTGCCGGAGG ACGAGGTCGTGCAGCCCCTGAAAAAGGTGATTCGCATCGGGAACGACCGGGATGCGCAGATCGCGGAGGCGAACAAGCGC AAGGAGAAGGACGCCTTTGCGATCGCCCTCCAGAAGATCGAGGCCCACAATCTGGACATGTACCTGGTCGACGTTGAATA TACATTTGATGGCTCGAAGATCATCTTCTACTTCACCGCCGAGGGGCGGGTTGACTTCCGTGAACTGGTGCGGGACCTGG CCTCGGTATTCCGCACCCGCATCGAGATGCGGCAGATCGGTGTGCGCGACGAAGCCAAACTGCTGGGGGGCATCGGCCCC TGCGGCCGGGTGCTCTGCTGCACCAGCTTCCTCGGCGAGTTCGCGCCGGTCTCCATCCGGATGGCCAAGGATCAGAACCT CTCGCTGAACCCGTCGAAGATCTCCGGGCTCTGCGGGAGGCTGATGTGCTGCCTGCGGTTCGAGCAGGAAACCTACGAGG CGGCCAAGAAGGACCCAACCCTTGCTCCTGCGTACGTACCGCCGCCGCTGCCTGACCCTGAGCCGGAGGAGATGCCTGAG GTCGAGTGGCTGACGGAGCCGGCCGCTCCGGTGCCGGCCGAGGCGGTCCAGCCGGGCGCCGGCGACCGGGCGCGGATCGC CGGGGCCCGGGAGGACGAGAGGCCCTCGAGGCGGGAGCGCGGCCGTAACCGTGGCGAGGGAACGCAGGAAGGTAACGCTG TCGCCCAGGATGAGACCGCCGAGGCCGGCAGCGCCGGTGGCGAGCGCAAGAGCCGGCGGCGGGCGAGGCGGCGGTCGAAG CGGCAGCAGCCGCGGGTGGACGACAGCCGCCAAGAGCGTAGCCAGGCCGGGGGCAACCGGGAAGAGCAGGGCCGGGCCGA AGCCGGCCGGGGTGACCATGGCCGGCGGGACGGCAGCCAGGCCGGGGAGCAGTCCCGTCGGCGCGGCCACGGCGCCCGGG AGGGCGGCGAGCCGCACGGTGAGGCAGCAAGCGCCGAACGTCCCGCGCGCAGCGCGCACCGGCGTCGCCGCAGGCGGAGA CCGGCCGCGGCGGTGGGCGGCGCCGCAGGCGGGACGGCATCAGACGGCGGTGCGCCCGCGGCCGGCGAGGCCGGCGGCTA A
Upstream 100 bases:
>100_bases CAGGATTCATTCTGAGCAGGATTCATTCCCAGGAGATCATAACGGAGAGGCCCCACGAGCGCATGATGGACGCTGCCGCG GGCAGCGAGGAGGTGACGGG
Downstream 100 bases:
>100_bases CCTACGGGAGGACGGCAGGACGTGGCGGGCACGCTCTAGATCGTCGGCACGCCGATCGGGAACCTGGAGGACGTCACGCA CCGGGCCCTGCGCATCCTGC
Product: putative signal peptidase II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MVCVVGVRFKLAGKVYYFDPGELPVAQGDRVIVETVRGVEYGEVVVGPKMVPEDEVVQPLKKVIRIGNDRDAQIAEANKR KEKDAFAIALQKIEAHNLDMYLVDVEYTFDGSKIIFYFTAEGRVDFRELVRDLASVFRTRIEMRQIGVRDEAKLLGGIGP CGRVLCCTSFLGEFAPVSIRMAKDQNLSLNPSKISGLCGRLMCCLRFEQETYEAAKKDPTLAPAYVPPPLPDPEPEEMPE VEWLTEPAAPVPAEAVQPGAGDRARIAGAREDERPSRRERGRNRGEGTQEGNAVAQDETAEAGSAGGERKSRRRARRRSK RQQPRVDDSRQERSQAGGNREEQGRAEAGRGDHGRRDGSQAGEQSRRRGHGAREGGEPHGEAASAERPARSAHRRRRRRR PAAAVGGAAGGTASDGGAPAAGEAGG
Sequences:
>Translated_426_residues MVCVVGVRFKLAGKVYYFDPGELPVAQGDRVIVETVRGVEYGEVVVGPKMVPEDEVVQPLKKVIRIGNDRDAQIAEANKR KEKDAFAIALQKIEAHNLDMYLVDVEYTFDGSKIIFYFTAEGRVDFRELVRDLASVFRTRIEMRQIGVRDEAKLLGGIGP CGRVLCCTSFLGEFAPVSIRMAKDQNLSLNPSKISGLCGRLMCCLRFEQETYEAAKKDPTLAPAYVPPPLPDPEPEEMPE VEWLTEPAAPVPAEAVQPGAGDRARIAGAREDERPSRRERGRNRGEGTQEGNAVAQDETAEAGSAGGERKSRRRARRRSK RQQPRVDDSRQERSQAGGNREEQGRAEAGRGDHGRRDGSQAGEQSRRRGHGAREGGEPHGEAASAERPARSAHRRRRRRR PAAAVGGAAGGTASDGGAPAAGEAGG >Mature_426_residues MVCVVGVRFKLAGKVYYFDPGELPVAQGDRVIVETVRGVEYGEVVVGPKMVPEDEVVQPLKKVIRIGNDRDAQIAEANKR KEKDAFAIALQKIEAHNLDMYLVDVEYTFDGSKIIFYFTAEGRVDFRELVRDLASVFRTRIEMRQIGVRDEAKLLGGIGP CGRVLCCTSFLGEFAPVSIRMAKDQNLSLNPSKISGLCGRLMCCLRFEQETYEAAKKDPTLAPAYVPPPLPDPEPEEMPE VEWLTEPAAPVPAEAVQPGAGDRARIAGAREDERPSRRERGRNRGEGTQEGNAVAQDETAEAGSAGGERKSRRRARRRSK RQQPRVDDSRQERSQAGGNREEQGRAEAGRGDHGRRDGSQAGEQSRRRGHGAREGGEPHGEAASAERPARSAHRRRRRRR PAAAVGGAAGGTASDGGAPAAGEAGG
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 46385; Mature: 46385
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCVVGVRFKLAGKVYYFDPGELPVAQGDRVIVETVRGVEYGEVVVGPKMVPEDEVVQPL CEEEEEEEEEEECEEEEECCCCCCCCCCCEEEEHHHCCCCCCCEEECCCCCCHHHHHHHH KKVIRIGNDRDAQIAEANKRKEKDAFAIALQKIEAHNLDMYLVDVEYTFDGSKIIFYFTA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEC EGRVDFRELVRDLASVFRTRIEMRQIGVRDEAKLLGGIGPCGRVLCCTSFLGEFAPVSIR CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE MAKDQNLSLNPSKISGLCGRLMCCLRFEQETYEAAKKDPTLAPAYVPPPLPDPEPEEMPE EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VEWLTEPAAPVPAEAVQPGAGDRARIAGAREDERPSRRERGRNRGEGTQEGNAVAQDETA CHHHCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCH EAGSAGGERKSRRRARRRSKRQQPRVDDSRQERSQAGGNREEQGRAEAGRGDHGRRDGSQ HCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCHHHCCCCCCCCCCCHH AGEQSRRRGHGAREGGEPHGEAASAERPARSAHRRRRRRRPAAAVGGAAGGTASDGGAPA HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC AGEAGG CCCCCC >Mature Secondary Structure MVCVVGVRFKLAGKVYYFDPGELPVAQGDRVIVETVRGVEYGEVVVGPKMVPEDEVVQPL CEEEEEEEEEEECEEEEECCCCCCCCCCCEEEEHHHCCCCCCCEEECCCCCCHHHHHHHH KKVIRIGNDRDAQIAEANKRKEKDAFAIALQKIEAHNLDMYLVDVEYTFDGSKIIFYFTA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEC EGRVDFRELVRDLASVFRTRIEMRQIGVRDEAKLLGGIGPCGRVLCCTSFLGEFAPVSIR CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE MAKDQNLSLNPSKISGLCGRLMCCLRFEQETYEAAKKDPTLAPAYVPPPLPDPEPEEMPE EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC VEWLTEPAAPVPAEAVQPGAGDRARIAGAREDERPSRRERGRNRGEGTQEGNAVAQDETA CHHHCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCH EAGSAGGERKSRRRARRRSKRQQPRVDDSRQERSQAGGNREEQGRAEAGRGDHGRRDGSQ HCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCHHHCCCCCCCCCCCHH AGEQSRRRGHGAREGGEPHGEAASAERPARSAHRRRRRRRPAAAVGGAAGGTASDGGAPA HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC AGEAGG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]