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The map label for this gene is rsmI [H]

Identifier: 51894389

GI number: 51894389

Start: 3473726

End: 3474481

Strand: Reverse

Name: rsmI [H]

Synonym: STH3254

Alternate gene names: 51894389

Gene position: 3474481-3473726 (Counterclockwise)

Preceding gene: 51894390

Following gene: 51894387

Centisome position: 97.43

GC content: 69.58

Gene sequence:

>756_bases
GTGATCGCCTGCGAGGACACGCGGGAGACCCGCAAGCTGCTGCAGCACTTCCAGATCGACACGCCGACCACCAGCTACCA
CGAACACAACAAGCGCAAGGCGGGACCGGCCCTGATCCGCCGGCTGCTGGACGGCGAGGACGTTGCACTGGTGTCCGACG
CCGGGATGCCGGCCATCTCCGACCCCGGGGAGGAGCTGGTGCGCAGCGCCCTGGACGCCGGGATTCCGGTCGTGCCCGTT
CCGGGCCCCACCGCGTTGGTGACGGCCCTGGTCGCGTCGGGCCTGCCTACCGGCCGCTTTGCGTTCGAGGGGTTCCTGCC
CCATAAGGGCCGAGAGCGCAGGCGCGCCCTGGAGCGGCTCAAGGACGAGGAGCGCACCCTGATCCTCTACGAGGCCCCGC
ACCGGCTGCTGGAGACGCTCCATGACCTGCGGGAGACGCTGGGCGACCGGCCGATGACCGCCGCACGTGAGTTGACGAAA
CTCCACGAGGAGTACGTGCGGGGCACTGTCTCGCAGGTGATCGACCATTTCAACCGCAACGCCCCGCGCGGCGAGTTCGT
CCTCGTGGTGCAGGGGGCCGAGGCGGAAGCCCCCGTCGCCGGAGCCCCGGATCCGGCGCTTCTTGCCGGAGAGGTTGCGG
CCTTCGTGGCGCAGGGGATGGACCGCAAGCTGGCCATGAAGGAGGTGGCCCAGCGGTTCGGGGTCTCCCGCAAGGCCGTC
TACCAGGCCCTGCTGGATGCGAAGGATGAGAAGTAA

Upstream 100 bases:

>100_bases
ACGGCAGGACGTGGCGGGCACGCTCTAGATCGTCGGCACGCCGATCGGGAACCTGGAGGACGTCACGCACCGGGCCCTGC
GCATCCTGCGGTCGGTCTCC

Downstream 100 bases:

>100_bases
GAAATAACAAAAGCACTCCGCCGCGCGGAGTGCTTTAGCTTTCCCTGCGAGTGGTCTAACCGACCTGATGGGCACGCTCA
GCCATGGAGGCAAGGCAGGA

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MIACEDTRETRKLLQHFQIDTPTTSYHEHNKRKAGPALIRRLLDGEDVALVSDAGMPAISDPGEELVRSALDAGIPVVPV
PGPTALVTALVASGLPTGRFAFEGFLPHKGRERRRALERLKDEERTLILYEAPHRLLETLHDLRETLGDRPMTAARELTK
LHEEYVRGTVSQVIDHFNRNAPRGEFVLVVQGAEAEAPVAGAPDPALLAGEVAAFVAQGMDRKLAMKEVAQRFGVSRKAV
YQALLDAKDEK

Sequences:

>Translated_251_residues
MIACEDTRETRKLLQHFQIDTPTTSYHEHNKRKAGPALIRRLLDGEDVALVSDAGMPAISDPGEELVRSALDAGIPVVPV
PGPTALVTALVASGLPTGRFAFEGFLPHKGRERRRALERLKDEERTLILYEAPHRLLETLHDLRETLGDRPMTAARELTK
LHEEYVRGTVSQVIDHFNRNAPRGEFVLVVQGAEAEAPVAGAPDPALLAGEVAAFVAQGMDRKLAMKEVAQRFGVSRKAV
YQALLDAKDEK
>Mature_251_residues
MIACEDTRETRKLLQHFQIDTPTTSYHEHNKRKAGPALIRRLLDGEDVALVSDAGMPAISDPGEELVRSALDAGIPVVPV
PGPTALVTALVASGLPTGRFAFEGFLPHKGRERRRALERLKDEERTLILYEAPHRLLETLHDLRETLGDRPMTAARELTK
LHEEYVRGTVSQVIDHFNRNAPRGEFVLVVQGAEAEAPVAGAPDPALLAGEVAAFVAQGMDRKLAMKEVAQRFGVSRKAV
YQALLDAKDEK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=199, Percent_Identity=47.7386934673367, Blast_Score=180, Evalue=8e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 27579; Mature: 27579

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIACEDTRETRKLLQHFQIDTPTTSYHEHNKRKAGPALIRRLLDGEDVALVSDAGMPAIS
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCC
DPGEELVRSALDAGIPVVPVPGPTALVTALVASGLPTGRFAFEGFLPHKGRERRRALERL
CCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHH
KDEERTLILYEAPHRLLETLHDLRETLGDRPMTAARELTKLHEEYVRGTVSQVIDHFNRN
CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APRGEFVLVVQGAEAEAPVAGAPDPALLAGEVAAFVAQGMDRKLAMKEVAQRFGVSRKAV
CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
YQALLDAKDEK
HHHHHHCCCCC
>Mature Secondary Structure
MIACEDTRETRKLLQHFQIDTPTTSYHEHNKRKAGPALIRRLLDGEDVALVSDAGMPAIS
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCC
DPGEELVRSALDAGIPVVPVPGPTALVTALVASGLPTGRFAFEGFLPHKGRERRRALERL
CCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHH
KDEERTLILYEAPHRLLETLHDLRETLGDRPMTAARELTKLHEEYVRGTVSQVIDHFNRN
CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APRGEFVLVVQGAEAEAPVAGAPDPALLAGEVAAFVAQGMDRKLAMKEVAQRFGVSRKAV
CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHH
YQALLDAKDEK
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]