| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894294
Identifier: 51894294
GI number: 51894294
Start: 3356067
End: 3357320
Strand: Reverse
Name: 51894294
Synonym: STH3159
Alternate gene names: NA
Gene position: 3357320-3356067 (Counterclockwise)
Preceding gene: 51894296
Following gene: 51894293
Centisome position: 94.14
GC content: 71.53
Gene sequence:
>1254_bases ATGGTGCGCAGGGCCTGGTGGGTCGTTCTGACGCTCGCCATGGTGCTGGCCGCACAGTGGATGATGGCGCGCGGCCACGC GGACCTGGCGGTGAACGAGGAGCTGCTGGCGGGGAATCCGACGCTGCACGTGTCGGCGGAGGAGGAGTACCGGGGTACCG TCATTGTGCTGCACGGGTTTGGCGGCAGCAAAGAGATGATGCAGTACTGGGGCTACGCGCTGGCCCGCCTGGGCTTCGAC GTCTACATCCCGGACTTGCCCGGCCACGGGGCGCAGACCGCGCCAATGGCCGATTCCCCCGGGACCGCGAACCAGGTGAG GGATGCGCTGGTTGCCGCCGGCCGGGCCGAACCGGACCGGGTGGGTCTGATCGGCCATCCGACGTCCCTGAATCCCCTGG CCCCCTTGTATGACTTGGATGCCGTGGCCGATGCGGCGGGGCGGCTGTCCAGCGACGTCGGTGGCGATGTGCCGGCAGGC GCCGCCCCGGGCGGGTCGCCCGCCTGGCTGCTGCTCGGGCTGGCGGGCGGCGTCGGTGCGCTCCCTGCGGTGGCCGCGCT GGTGCGACCCGATCCCCGGAGATCCGGCCGGCGGCAGCAGCCCGCGGGTCTTGTCACCGGCCTGGCCGCCGTGGCGGTCT CCCTGCTCAGCGCGGTTCTGGCCGTGGTCTACCTGCGCGTGCCGCAGCTGGGCGTCGCCACGCTGGACTACCTGCTACCC TATTTCCTGGTCGCGGCTGTCGTTCTCCTGCTCCTCCGCAAGCTTTGGCCGCGGGAGTTCGGCGCGTCCGCCCCGGGCGA GGCCGAGTCGGTTCCCCACTCCCTGCTGCGGGGGCTGGCGGTGGCTCTGGCCTTCCTCGGGGCTCTCGTGCCGGTGATTC ATCAGAATGTCACCTATTTTGTACCGACGGGGCCGCGAATCCTGCCGCTGGCCGCCACTGCGCTGGCCTACTGGCTGTAC GCCTTCCAGGAGGAGTCGCTGAAGCGGGCCGTGGCGGGCGGGCCGTCGCCGGCGGGCCTTGTGCTGGGGCTTGCGGCCAA GATCCTGATGGTCGCCACCTGGGTCGGGGCGGGGGTTCTGCCCAATCCGCCTGCGCACCTGCCCGCCGTTCTCCCCGTTG CCCTCGGGGTGTTGGTCACGTTGGAGATCCTGAGCGGCGTGCTGGCCGCGATGCGCCTCTCCGCGCTGAGCGTCGCGCTG GCGGAGGCGGTGGCGGTCGGCTGGACGGCCGCGGTGATGCTGCCGCTGTTATGA
Upstream 100 bases:
>100_bases GGCGCCGGAAGCAGGGGATTCACACACAGGTATGGAAGGAAGAATACGAATATACCCTGATACTTCAGGCACAGTAACAA CCGGGTTGGGGGACAGGACG
Downstream 100 bases:
>100_bases GGGGTTAACATAGACCTCCCCGCGTGGCGTGGGTATAATAGACCCCGCCACCGACTTTTTTTGCGGGGGTGAAAGGGTTG TCCGAACCGCTCCTGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGFGGSKEMMQYWGYALARLGFD VYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDRVGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAG AAPGGSPAWLLLGLAGGVGALPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYFVPTGPRILPLAATALAYWLY AFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVLPNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVAL AEAVAVGWTAAVMLPLL
Sequences:
>Translated_417_residues MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGFGGSKEMMQYWGYALARLGFD VYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDRVGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAG AAPGGSPAWLLLGLAGGVGALPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYFVPTGPRILPLAATALAYWLY AFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVLPNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVAL AEAVAVGWTAAVMLPLL >Mature_417_residues MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGFGGSKEMMQYWGYALARLGFD VYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDRVGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAG AAPGGSPAWLLLGLAGGVGALPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYFVPTGPRILPLAATALAYWLY AFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVLPNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVAL AEAVAVGWTAAVMLPLL
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43093; Mature: 43093
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGF CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCCCCEEEEECCHHHCCEEEEEECC GGSKEMMQYWGYALARLGFDVYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDR CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC VGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAGAAPGGSPAWLLLGLAGGVGA EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEHHCCHHH LPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYF HHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE VPTGPRILPLAATALAYWLYAFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVALAEAVAVGWTAAVMLPLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGF CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCCCCEEEEECCHHHCCEEEEEECC GGSKEMMQYWGYALARLGFDVYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDR CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC VGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAGAAPGGSPAWLLLGLAGGVGA EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEHHCCHHH LPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYF HHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE VPTGPRILPLAATALAYWLYAFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVALAEAVAVGWTAAVMLPLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA