Click here to switch to the map view.

The map label for this gene is fixN [H]

Identifier: 51894288

GI number: 51894288

Start: 3350893

End: 3352296

Strand: Reverse

Name: fixN [H]

Synonym: STH3153

Alternate gene names: 51894288

Gene position: 3352296-3350893 (Counterclockwise)

Preceding gene: 51894289

Following gene: 51894287

Centisome position: 94.0

GC content: 62.39

Gene sequence:

>1404_bases
ATGTTCAGCAACGTAGAAGGGTCCGCCAGTCGGAACTTCTTCTACACCGCGGTCATCTGGATGGCCATCGGCATGAGCTT
CGGGTTGTTCGCCGCCGTGCTGCTGGTCATCCCGGACCTGGTCAAGAACGTTCCCGTGCTCGAGTACTTCACCTTTGGCC
GCGTGCGGCCGGTGCACACCAACCTGGTGCTCTTCGGCTGGCTCAGCGGGGCTTACTTCGCGACGCTCTTTTACATGGTT
CCTCGGGTCTGTGGCACCCCGCTGTGGAGTGAGCGGCTGGGCAATTTCTCGGTCGTCTTCTACAACCTCCTCATGACCGC
CTACACCGTGACCCTGCTCATGGGCATGAACGCAGGCCGGGAGTACGCGGAGTCCCCCTGGATCCTGAAGATCCTCACGG
TGGTCCTGTTCGCGCTGGTCTTCTTCAACGTGATCATGACCTTCGCCAGGCGCAAGGAGAAGGAGCTGTACGTCACCGCC
TGGTACATGCTGGGCGCCGTGTTCACCACGCCGGTGATCTACATCGTCGGCAACCAGTTCCTCCTCCCCAACAACCCCAT
CACCGGTGTGAATGACGCGGTGGTCAACTGGTTCTACGGTCACAACATCCTGGGCTACTGGTTCACGCCCATCGGCGTCG
GCGCCGTCTACTACCTGCTTCCCAAGCTGACGGGCAACCCCATCTGGAGCCACAAGCTCTCCATGATCGGCTTCTGGATG
CTGATGTTCGTCTACGGCCCCACGGGGGCTCACCACCTGGTCAACGGCCCCGTGCCGTACTGGCTGCAGACGGTCGCCAT
CGCCTTCTCCGTCTGCCTGATCGTGCCGGTCTGGACCGTGCTCACCAACTTCTACGGCACCATGAACGGACGCTGGGGCG
CCCTGAAGGAGTCCGTGCCCCTGAAGTTCACGGTGAGTGCGATGGTCTTCTACTTCATCACCTGCTTCCAGGGGCCGATG
CAGTCGCTGCGCTCGGTGAGCTCCATCGTCCACTTCACCAACTGGGTCGTGGGCCACGCGCATCTCGCGCTGGTCGGCAC
CTTCTCGTTCATCATGTTCGCGACCATCTACTACGCCCTGCCCCGGCTGATCAACCGGGAGATCTGGTCGGCCAAGCTGA
TGGAATGGCACTTCTGGCTCTCCCTCATCGGCTTCACCCTGTTCTTCGTATCCCTGACCATCGGCGGGCTCGTGCAGGGC
TCTGACTGGGCGGCCAACCAGTCGGCCAACTTCATCGCCTCGGTCATCAACCAGCGGCCGTTCAACATCGCCCGGGCCTT
CGGCGGGGCGATGATCCTGGGCGCCCAGCTCCTGTTCATCTTCAACATCTTCAAGACCGCGACCGCCGGCCGGCAGTTCA
GCGGCGAGTCCGCCGAGGTCGGCTCCGTCGTCGCCGGCGTGTAG

Upstream 100 bases:

>100_bases
GTTCTTCACCGCCGGCGTCCTCATCGCCATCCTCCGGCTGCCGCCGGGCGCACGGCTGTAGGTTCCCATGTCCCACTCTG
CAAAGGGGAGGAGATAGAGG

Downstream 100 bases:

>100_bases
GGAGGGGGGTGCAAGCATGGGCAACAAGTTCGAGCGGAACGCTGCGCTCATCGGTCTCGGCGCCTTCCTGCTCCTCACCT
TCGCGGTGATCATCACCGTC

Product: cytochrome C oxidase heme b and copper-binding subunit

Products: NA

Alternate protein names: Cytochrome c oxidase polypeptide I homolog [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MFSNVEGSASRNFFYTAVIWMAIGMSFGLFAAVLLVIPDLVKNVPVLEYFTFGRVRPVHTNLVLFGWLSGAYFATLFYMV
PRVCGTPLWSERLGNFSVVFYNLLMTAYTVTLLMGMNAGREYAESPWILKILTVVLFALVFFNVIMTFARRKEKELYVTA
WYMLGAVFTTPVIYIVGNQFLLPNNPITGVNDAVVNWFYGHNILGYWFTPIGVGAVYYLLPKLTGNPIWSHKLSMIGFWM
LMFVYGPTGAHHLVNGPVPYWLQTVAIAFSVCLIVPVWTVLTNFYGTMNGRWGALKESVPLKFTVSAMVFYFITCFQGPM
QSLRSVSSIVHFTNWVVGHAHLALVGTFSFIMFATIYYALPRLINREIWSAKLMEWHFWLSLIGFTLFFVSLTIGGLVQG
SDWAANQSANFIASVINQRPFNIARAFGGAMILGAQLLFIFNIFKTATAGRQFSGESAEVGSVVAGV

Sequences:

>Translated_467_residues
MFSNVEGSASRNFFYTAVIWMAIGMSFGLFAAVLLVIPDLVKNVPVLEYFTFGRVRPVHTNLVLFGWLSGAYFATLFYMV
PRVCGTPLWSERLGNFSVVFYNLLMTAYTVTLLMGMNAGREYAESPWILKILTVVLFALVFFNVIMTFARRKEKELYVTA
WYMLGAVFTTPVIYIVGNQFLLPNNPITGVNDAVVNWFYGHNILGYWFTPIGVGAVYYLLPKLTGNPIWSHKLSMIGFWM
LMFVYGPTGAHHLVNGPVPYWLQTVAIAFSVCLIVPVWTVLTNFYGTMNGRWGALKESVPLKFTVSAMVFYFITCFQGPM
QSLRSVSSIVHFTNWVVGHAHLALVGTFSFIMFATIYYALPRLINREIWSAKLMEWHFWLSLIGFTLFFVSLTIGGLVQG
SDWAANQSANFIASVINQRPFNIARAFGGAMILGAQLLFIFNIFKTATAGRQFSGESAEVGSVVAGV
>Mature_467_residues
MFSNVEGSASRNFFYTAVIWMAIGMSFGLFAAVLLVIPDLVKNVPVLEYFTFGRVRPVHTNLVLFGWLSGAYFATLFYMV
PRVCGTPLWSERLGNFSVVFYNLLMTAYTVTLLMGMNAGREYAESPWILKILTVVLFALVFFNVIMTFARRKEKELYVTA
WYMLGAVFTTPVIYIVGNQFLLPNNPITGVNDAVVNWFYGHNILGYWFTPIGVGAVYYLLPKLTGNPIWSHKLSMIGFWM
LMFVYGPTGAHHLVNGPVPYWLQTVAIAFSVCLIVPVWTVLTNFYGTMNGRWGALKESVPLKFTVSAMVFYFITCFQGPM
QSLRSVSSIVHFTNWVVGHAHLALVGTFSFIMFATIYYALPRLINREIWSAKLMEWHFWLSLIGFTLFFVSLTIGGLVQG
SDWAANQSANFIASVINQRPFNIARAFGGAMILGAQLLFIFNIFKTATAGRQFSGESAEVGSVVAGV

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 52341; Mature: 52341

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50855 COX1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNVEGSASRNFFYTAVIWMAIGMSFGLFAAVLLVIPDLVKNVPVLEYFTFGRVRPVHT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEC
NLVLFGWLSGAYFATLFYMVPRVCGTPLWSERLGNFSVVFYNLLMTAYTVTLLMGMNAGR
CEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
EYAESPWILKILTVVLFALVFFNVIMTFARRKEKELYVTAWYMLGAVFTTPVIYIVGNQF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHCCEEEEECCEE
LLPNNPITGVNDAVVNWFYGHNILGYWFTPIGVGAVYYLLPKLTGNPIWSHKLSMIGFWM
ECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LMFVYGPTGAHHLVNGPVPYWLQTVAIAFSVCLIVPVWTVLTNFYGTMNGRWGALKESVP
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LKFTVSAMVFYFITCFQGPMQSLRSVSSIVHFTNWVVGHAHLALVGTFSFIMFATIYYAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRLINREIWSAKLMEWHFWLSLIGFTLFFVSLTIGGLVQGSDWAANQSANFIASVINQRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC
FNIARAFGGAMILGAQLLFIFNIFKTATAGRQFSGESAEVGSVVAGV
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MFSNVEGSASRNFFYTAVIWMAIGMSFGLFAAVLLVIPDLVKNVPVLEYFTFGRVRPVHT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEC
NLVLFGWLSGAYFATLFYMVPRVCGTPLWSERLGNFSVVFYNLLMTAYTVTLLMGMNAGR
CEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
EYAESPWILKILTVVLFALVFFNVIMTFARRKEKELYVTAWYMLGAVFTTPVIYIVGNQF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHCCEEEEECCEE
LLPNNPITGVNDAVVNWFYGHNILGYWFTPIGVGAVYYLLPKLTGNPIWSHKLSMIGFWM
ECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LMFVYGPTGAHHLVNGPVPYWLQTVAIAFSVCLIVPVWTVLTNFYGTMNGRWGALKESVP
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LKFTVSAMVFYFITCFQGPMQSLRSVSSIVHFTNWVVGHAHLALVGTFSFIMFATIYYAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRLINREIWSAKLMEWHFWLSLIGFTLFFVSLTIGGLVQGSDWAANQSANFIASVINQRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC
FNIARAFGGAMILGAQLLFIFNIFKTATAGRQFSGESAEVGSVVAGV
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8282187 [H]