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The map label for this gene is 51894287

Identifier: 51894287

GI number: 51894287

Start: 3349914

End: 3350876

Strand: Reverse

Name: 51894287

Synonym: STH3152

Alternate gene names: NA

Gene position: 3350876-3349914 (Counterclockwise)

Preceding gene: 51894288

Following gene: 51894286

Centisome position: 93.96

GC content: 67.81

Gene sequence:

>963_bases
ATGGGCAACAAGTTCGAGCGGAACGCTGCGCTCATCGGTCTCGGCGCCTTCCTGCTCCTCACCTTCGCGGTGATCATCAC
CGTCGCGGTGCCGCTGATGCAGGAGGACCTGTACGCCGCCTCGCCGTCGTCGCCCCGGTACTCGGGCATGTTCCCCGACG
GCAAGCCCATCAGCCCGCAGGTGGCGCGCGGGCGGGAGATCTACATCCGTGAGGGCTGCTTCTACTGCCATACCCAGCAG
GTCCGCACGCTACCCAACGACGCCGCCTTCCAGGCCCCTGCCGTCACCCTGGATGACGGCAGGGTCGTCGGGGGCCGGCC
GACCCGTCCCGAGGACTACGGCAACGACAACCCGGCCCTCCTGGGTTCGCAGCGAACCGGTCCCGACCTGAAGTACGTGG
GCCACCGGCTGCCCTCGAAGGAGTGGCATATCGCCCACCTGATCGACCCGCGTTCGACTGAGCCCAACTCGATCATGCCG
TCCTACGCCCACCTGCCGCCGGACGAGCTGGACGCCCTGGCCGAGTACCTGCTGGTCCTGCGCGACTGGGCGGTTCCGGT
CCAGACCCTGGCCAAGTACCCCGGGCCGAACATCCTGGAGGCCACCGACGACATCCTGCCCGACGAGTACCGCGACCTGC
AGAACCCGTACTCCATCGACGACGCCGCCGTGCTGGCCCGGGCTCAGGAGCTCATCGAGGCCAACGGCTGTCTGCAGTGC
CACGGCGCCGACATGCGCGGCATGACCGCGGCGGACGGCTGGGGCAGCCCGCCCTATCCGACCAACTGGTTTGAGGCAGG
CAAGGTCCACTCCGAACAGTTCATCTTCTGGGTGATCTCGGAAGGCACGCTGAAGGAGGACGGCTCCGGGTCCGGCATGC
CGTCGTGGCGGCTGAACGGACTGTCCGACGAGGACCGCTGGGCCCTGACCACCTACATCAAGTGGTTGGGAACCCAGGAG
TAG

Upstream 100 bases:

>100_bases
TTCAACATCTTCAAGACCGCGACCGCCGGCCGGCAGTTCAGCGGCGAGTCCGCCGAGGTCGGCTCCGTCGTCGCCGGCGT
GTAGGGAGGGGGGTGCAAGC

Downstream 100 bases:

>100_bases
GCCCCGCGAAAGGGGGATCCCACCGTGGACATCGAATGGACCCGATTCAGCGACCTGAGCGTTTCCAGCGGCTTTCTGCT
GATCGCCGTGCTGGTGCTGT

Product: cytochrome C oxidase mono-heme subunit

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Cb-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome-C Oxidase FixO Chain; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-C Oxidase Subunit II; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Cytochrome C Subunit; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Transmembrane Cytochrome C Oxidase FixO Protein; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome C Oxidase Family Protein; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Family Protein; Cytochrome C Oxidase CcoO Subunit; Cytochrome Cbb3 Oxidase Diheme Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGNKFERNAALIGLGAFLLLTFAVIITVAVPLMQEDLYAASPSSPRYSGMFPDGKPISPQVARGREIYIREGCFYCHTQQ
VRTLPNDAAFQAPAVTLDDGRVVGGRPTRPEDYGNDNPALLGSQRTGPDLKYVGHRLPSKEWHIAHLIDPRSTEPNSIMP
SYAHLPPDELDALAEYLLVLRDWAVPVQTLAKYPGPNILEATDDILPDEYRDLQNPYSIDDAAVLARAQELIEANGCLQC
HGADMRGMTAADGWGSPPYPTNWFEAGKVHSEQFIFWVISEGTLKEDGSGSGMPSWRLNGLSDEDRWALTTYIKWLGTQE

Sequences:

>Translated_320_residues
MGNKFERNAALIGLGAFLLLTFAVIITVAVPLMQEDLYAASPSSPRYSGMFPDGKPISPQVARGREIYIREGCFYCHTQQ
VRTLPNDAAFQAPAVTLDDGRVVGGRPTRPEDYGNDNPALLGSQRTGPDLKYVGHRLPSKEWHIAHLIDPRSTEPNSIMP
SYAHLPPDELDALAEYLLVLRDWAVPVQTLAKYPGPNILEATDDILPDEYRDLQNPYSIDDAAVLARAQELIEANGCLQC
HGADMRGMTAADGWGSPPYPTNWFEAGKVHSEQFIFWVISEGTLKEDGSGSGMPSWRLNGLSDEDRWALTTYIKWLGTQE
>Mature_319_residues
GNKFERNAALIGLGAFLLLTFAVIITVAVPLMQEDLYAASPSSPRYSGMFPDGKPISPQVARGREIYIREGCFYCHTQQV
RTLPNDAAFQAPAVTLDDGRVVGGRPTRPEDYGNDNPALLGSQRTGPDLKYVGHRLPSKEWHIAHLIDPRSTEPNSIMPS
YAHLPPDELDALAEYLLVLRDWAVPVQTLAKYPGPNILEATDDILPDEYRDLQNPYSIDDAAVLARAQELIEANGCLQCH
GADMRGMTAADGWGSPPYPTNWFEAGKVHSEQFIFWVISEGTLKEDGSGSGMPSWRLNGLSDEDRWALTTYIKWLGTQE

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 35373; Mature: 35242

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKFERNAALIGLGAFLLLTFAVIITVAVPLMQEDLYAASPSSPRYSGMFPDGKPISPQ
CCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
VARGREIYIREGCFYCHTQQVRTLPNDAAFQAPAVTLDDGRVVGGRPTRPEDYGNDNPAL
HHCCCEEEEECCEEEEECHHHHCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCEE
LGSQRTGPDLKYVGHRLPSKEWHIAHLIDPRSTEPNSIMPSYAHLPPDELDALAEYLLVL
ECCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RDWAVPVQTLAKYPGPNILEATDDILPDEYRDLQNPYSIDDAAVLARAQELIEANGCLQC
HHHCCCHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEE
HGADMRGMTAADGWGSPPYPTNWFEAGKVHSEQFIFWVISEGTLKEDGSGSGMPSWRLNG
CCCCCCCCCCCCCCCCCCCCCCCHHCCCEECCEEEEEEEECCCCCCCCCCCCCCCCEECC
LSDEDRWALTTYIKWLGTQE
CCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNKFERNAALIGLGAFLLLTFAVIITVAVPLMQEDLYAASPSSPRYSGMFPDGKPISPQ
CCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
VARGREIYIREGCFYCHTQQVRTLPNDAAFQAPAVTLDDGRVVGGRPTRPEDYGNDNPAL
HHCCCEEEEECCEEEEECHHHHCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCEE
LGSQRTGPDLKYVGHRLPSKEWHIAHLIDPRSTEPNSIMPSYAHLPPDELDALAEYLLVL
ECCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RDWAVPVQTLAKYPGPNILEATDDILPDEYRDLQNPYSIDDAAVLARAQELIEANGCLQC
HHHCCCHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEE
HGADMRGMTAADGWGSPPYPTNWFEAGKVHSEQFIFWVISEGTLKEDGSGSGMPSWRLNG
CCCCCCCCCCCCCCCCCCCCCCCHHCCCEECCEEEEEEEECCCCCCCCCCCCCCCCEECC
LSDEDRWALTTYIKWLGTQE
CCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA