| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is fusA [H]
Identifier: 51894275
GI number: 51894275
Start: 3340397
End: 3342484
Strand: Reverse
Name: fusA [H]
Synonym: STH3140
Alternate gene names: 51894275
Gene position: 3342484-3340397 (Counterclockwise)
Preceding gene: 51894276
Following gene: 51894272
Centisome position: 93.73
GC content: 66.86
Gene sequence:
>2088_bases ATGGACTTGAGACGATTTGCTGTCGAGAAGGTGCGGAACGTTGCCCTCATTGCCCACGGCGGCGCCGGGAAGACCTCCCT GGCTGAGGCCATGCTGTTCACGGCCGGGGCAACGGATCGGCTTGGGCGCGTCGACGAGGGCAATACGGTGATGGACTACG ATCCCGAGGAGATCCGGCGGAAGGTCTCCATCTCCATGGGCATTGCGCCGCTGGAGTGGAAGGGCCACAAGTTCAACCTG CTGGATACTCCCGGGTATTTTGATTTTGTCGGCGAGGTCAAGGCGGCGCTGCGGGTTGTGGAGACGGCTGTTCTGGTGGT GGACGCGGTGGCCGGCATCGAGGTCGGCGCGGAGCTGACCTACGAGCACGCCCGGAAGGCCGGGGTCTCCCGGATGATCG TGATCAACAAGATGGACCGGGAGAACGCCAACTTCCGCAAGACCCTGAGCGCGTTGGAGGAGGCCTGGGGGCGGGGCGTC GTGGCGCTGCACCTGCCCATCGGCGCCGAGGCCAGCTTCTCCGGCGTCGTCGACGTGGTCAGGCAGAAGGCCTACACGTT CTCCGGCAAGCAGGTGAAGGAAGAAGCGGTGCCCGCCGAGTTCGACGGGCAGGTCGCGGAGATCCGCGAGAAGCTGATGG AACTGGCGGCCGAGGCCGACGATGAGCTCACCATGAAGTTCCTCGAGGAGGGCGAGCTCACCCAGGAGGAGCTGGAGCGG GGCCTGCGGCTGGGCGTGGTGAAGGGCGACATCGTCCCGGTCTTCGTCGCGGCCGCGGCCAGGAACATCGGCGTCAGCGC CCTGATGGACGCCATCGTCGCCTACGGGCCGTCTCCGGCAGACCGGGGCGACCTGGTCGGCCAGACGCCTGACGGCGAGC CCGTCAGCCAGCCCATCGGCGAGAACCAGCCCTTCAGCGCGCTGGTGTTCAAGACCACCGCGGACCCGTTCGTCGGCCGC ATGACGGTCATGCGGGTCTTCAACGGCAAGATCACCAGCGACCAGACGGTGTACAACGTGACGCGGGGCCGAAGCGAGCG CATCGGCAACATCTTCATCCCCAAGGGGAAGGGGCAGGAGCCGGTCACCGAGGCCGGCCCGGGCGACATCATCGCCGTCG CGAAGCTGGCCGTCACCCAGACCAACGACAGCCTGGGCGAAGAGGCGAATCCGCTGGTCCTGGAGCCCGTTGACTTCCCC GCCCCGGTCTACTCCGTTGCGGTGAGCCCGAAGTCCAAGGGCGACGAGGAGAAGATCGGCTCCGGTCTGCAGCGGCTGGC CGAGGAGGACGCGACCTTCACGGTGCGGCGTGACCCGGTCACCCACGAGACGATCCTCTCCGGCCTCGGCGAGACCCACG TGGACGTCATGATCGAGCGGCTGAAGCGGAAGTTCGGTGTGGAGGCCGTCCTGAGCGAGCCGAAGGTCGCGTACAAGGAG ACCATCCGCGGCAGGGCGCAGGGCGAGTACAAGCACAAGAAGCAGACCGGCGGCCGCGGCCAGTACGGCCATTGCAAGAT CGAGATCGAGCCGCTGCCCGAAGGCGAGTACGAGTTCGTCGACAAGATCTTCGCCGGCGCGATCCCGCTCAACTTCCGTC CGGCCGTCGACAAGGGCGTGCAGGAGACCATGGCCGAGGGCGTCCTGGCCGGCTACCCGGTGACGGGCGTCCGCTGCACC CTGCTGGACGGCTCCTACCATGAGGTCGACTCCTCCGAAATGGCCTTCAAGATCGCCGCCCGCAACGCGTTCCGGCAGGC GTTCATGAACGCGAAGCCGATCCTGCTGGAGCCGATCATGCGGCTGGAGGTTGTCGTGCCCGAGTCCTACATGGGCGACA TCATGGGCGACCTGAACAAGAAGCGCGGCCGCATCGCAGGCATGGAGCCCACCGGCGACGGCAAGCAGATCATCAAGGCG ATGGTCCCGCTCGCCGAGATGCACCGGTACGCCATCGACCTCCGGTCGATGACCCAGGGCCGCGGCCAGTTCACCATGGA GTTCGACCACTACGAGGAGGCCCCGGCCCAGGTGGCCAAGGCGGTCATCGATGCCGCCCAGGCCAGCCGCAAGGAGGAGT CCGAGTAG
Upstream 100 bases:
>100_bases GCGGTGCGCCTGTCGCCCCTGCGTCGCCGCCTGCAAGTCCGAACCGTTTTGCCTGGGGGCCCCTCGGCTGAGCGCAGTTC CATCAACCGTTGAGGAGGAG
Downstream 100 bases:
>100_bases ACGGGCTCGGGCCCGTTACGGCAGCGCCTCCAGCTGGACCAGCCGTAGCACCTCCCCGGTCTGCGCGTCGAGGACCAGCC GGATCCGCTGCCCGGCCGGC
Product: protein translation elongation factor G
Products: NA
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MDLRRFAVEKVRNVALIAHGGAGKTSLAEAMLFTAGATDRLGRVDEGNTVMDYDPEEIRRKVSISMGIAPLEWKGHKFNL LDTPGYFDFVGEVKAALRVVETAVLVVDAVAGIEVGAELTYEHARKAGVSRMIVINKMDRENANFRKTLSALEEAWGRGV VALHLPIGAEASFSGVVDVVRQKAYTFSGKQVKEEAVPAEFDGQVAEIREKLMELAAEADDELTMKFLEEGELTQEELER GLRLGVVKGDIVPVFVAAAARNIGVSALMDAIVAYGPSPADRGDLVGQTPDGEPVSQPIGENQPFSALVFKTTADPFVGR MTVMRVFNGKITSDQTVYNVTRGRSERIGNIFIPKGKGQEPVTEAGPGDIIAVAKLAVTQTNDSLGEEANPLVLEPVDFP APVYSVAVSPKSKGDEEKIGSGLQRLAEEDATFTVRRDPVTHETILSGLGETHVDVMIERLKRKFGVEAVLSEPKVAYKE TIRGRAQGEYKHKKQTGGRGQYGHCKIEIEPLPEGEYEFVDKIFAGAIPLNFRPAVDKGVQETMAEGVLAGYPVTGVRCT LLDGSYHEVDSSEMAFKIAARNAFRQAFMNAKPILLEPIMRLEVVVPESYMGDIMGDLNKKRGRIAGMEPTGDGKQIIKA MVPLAEMHRYAIDLRSMTQGRGQFTMEFDHYEEAPAQVAKAVIDAAQASRKEESE
Sequences:
>Translated_695_residues MDLRRFAVEKVRNVALIAHGGAGKTSLAEAMLFTAGATDRLGRVDEGNTVMDYDPEEIRRKVSISMGIAPLEWKGHKFNL LDTPGYFDFVGEVKAALRVVETAVLVVDAVAGIEVGAELTYEHARKAGVSRMIVINKMDRENANFRKTLSALEEAWGRGV VALHLPIGAEASFSGVVDVVRQKAYTFSGKQVKEEAVPAEFDGQVAEIREKLMELAAEADDELTMKFLEEGELTQEELER GLRLGVVKGDIVPVFVAAAARNIGVSALMDAIVAYGPSPADRGDLVGQTPDGEPVSQPIGENQPFSALVFKTTADPFVGR MTVMRVFNGKITSDQTVYNVTRGRSERIGNIFIPKGKGQEPVTEAGPGDIIAVAKLAVTQTNDSLGEEANPLVLEPVDFP APVYSVAVSPKSKGDEEKIGSGLQRLAEEDATFTVRRDPVTHETILSGLGETHVDVMIERLKRKFGVEAVLSEPKVAYKE TIRGRAQGEYKHKKQTGGRGQYGHCKIEIEPLPEGEYEFVDKIFAGAIPLNFRPAVDKGVQETMAEGVLAGYPVTGVRCT LLDGSYHEVDSSEMAFKIAARNAFRQAFMNAKPILLEPIMRLEVVVPESYMGDIMGDLNKKRGRIAGMEPTGDGKQIIKA MVPLAEMHRYAIDLRSMTQGRGQFTMEFDHYEEAPAQVAKAVIDAAQASRKEESE >Mature_695_residues MDLRRFAVEKVRNVALIAHGGAGKTSLAEAMLFTAGATDRLGRVDEGNTVMDYDPEEIRRKVSISMGIAPLEWKGHKFNL LDTPGYFDFVGEVKAALRVVETAVLVVDAVAGIEVGAELTYEHARKAGVSRMIVINKMDRENANFRKTLSALEEAWGRGV VALHLPIGAEASFSGVVDVVRQKAYTFSGKQVKEEAVPAEFDGQVAEIREKLMELAAEADDELTMKFLEEGELTQEELER GLRLGVVKGDIVPVFVAAAARNIGVSALMDAIVAYGPSPADRGDLVGQTPDGEPVSQPIGENQPFSALVFKTTADPFVGR MTVMRVFNGKITSDQTVYNVTRGRSERIGNIFIPKGKGQEPVTEAGPGDIIAVAKLAVTQTNDSLGEEANPLVLEPVDFP APVYSVAVSPKSKGDEEKIGSGLQRLAEEDATFTVRRDPVTHETILSGLGETHVDVMIERLKRKFGVEAVLSEPKVAYKE TIRGRAQGEYKHKKQTGGRGQYGHCKIEIEPLPEGEYEFVDKIFAGAIPLNFRPAVDKGVQETMAEGVLAGYPVTGVRCT LLDGSYHEVDSSEMAFKIAARNAFRQAFMNAKPILLEPIMRLEVVVPESYMGDIMGDLNKKRGRIAGMEPTGDGKQIIKA MVPLAEMHRYAIDLRSMTQGRGQFTMEFDHYEEAPAQVAKAVIDAAQASRKEESE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=693, Percent_Identity=33.6219336219336, Blast_Score=408, Evalue=1e-114, Organism=Homo sapiens, GI19923640, Length=721, Percent_Identity=29.6809986130374, Blast_Score=322, Evalue=6e-88, Organism=Homo sapiens, GI25306283, Length=451, Percent_Identity=29.9334811529933, Blast_Score=191, Evalue=3e-48, Organism=Homo sapiens, GI25306287, Length=290, Percent_Identity=35.1724137931034, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI4503483, Length=479, Percent_Identity=24.6346555323591, Blast_Score=96, Evalue=2e-19, Organism=Homo sapiens, GI157426893, Length=160, Percent_Identity=33.125, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=29.8507462686567, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1789738, Length=700, Percent_Identity=43.1428571428571, Blast_Score=558, Evalue=1e-160, Organism=Escherichia coli, GI1790835, Length=508, Percent_Identity=26.5748031496063, Blast_Score=142, Evalue=6e-35, Organism=Escherichia coli, GI48994988, Length=136, Percent_Identity=36.0294117647059, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1788922, Length=156, Percent_Identity=28.8461538461538, Blast_Score=63, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17533571, Length=701, Percent_Identity=32.0970042796006, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17556745, Length=698, Percent_Identity=24.785100286533, Blast_Score=228, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17506493, Length=823, Percent_Identity=23.3292831105711, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71988819, Length=578, Percent_Identity=22.8373702422145, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988811, Length=578, Percent_Identity=22.8373702422145, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17557151, Length=157, Percent_Identity=29.9363057324841, Blast_Score=72, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=694, Percent_Identity=33.1412103746398, Blast_Score=384, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6322359, Length=792, Percent_Identity=27.7777777777778, Blast_Score=289, Evalue=8e-79, Organism=Saccharomyces cerevisiae, GI6324707, Length=812, Percent_Identity=23.3990147783251, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320593, Length=812, Percent_Identity=23.3990147783251, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24582462, Length=697, Percent_Identity=34.4332855093257, Blast_Score=422, Evalue=1e-118, Organism=Drosophila melanogaster, GI221458488, Length=713, Percent_Identity=29.1725105189341, Blast_Score=275, Evalue=1e-73, Organism=Drosophila melanogaster, GI24585711, Length=482, Percent_Identity=24.896265560166, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI24585713, Length=482, Percent_Identity=24.896265560166, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI24585709, Length=482, Percent_Identity=24.6887966804979, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI78706572, Length=163, Percent_Identity=33.1288343558282, Blast_Score=79, Evalue=8e-15,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 75726; Mature: 75726
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRRFAVEKVRNVALIAHGGAGKTSLAEAMLFTAGATDRLGRVDEGNTVMDYDPEEIRR CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCHHCCCCCCCCEEECCCHHHHHH KVSISMGIAPLEWKGHKFNLLDTPGYFDFVGEVKAALRVVETAVLVVDAVAGIEVGAELT HHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YEHARKAGVSRMIVINKMDRENANFRKTLSALEEAWGRGVVALHLPIGAEASFSGVVDVV HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH RQKAYTFSGKQVKEEAVPAEFDGQVAEIREKLMELAAEADDELTMKFLEEGELTQEELER HHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHC GLRLGVVKGDIVPVFVAAAARNIGVSALMDAIVAYGPSPADRGDLVGQTPDGEPVSQPIG CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ENQPFSALVFKTTADPFVGRMTVMRVFNGKITSDQTVYNVTRGRSERIGNIFIPKGKGQE CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCC PVTEAGPGDIIAVAKLAVTQTNDSLGEEANPLVLEPVDFPAPVYSVAVSPKSKGDEEKIG CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHH SGLQRLAEEDATFTVRRDPVTHETILSGLGETHVDVMIERLKRKFGVEAVLSEPKVAYKE HHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH TIRGRAQGEYKHKKQTGGRGQYGHCKIEIEPLPEGEYEFVDKIFAGAIPLNFRPAVDKGV HHCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHH QETMAEGVLAGYPVTGVRCTLLDGSYHEVDSSEMAFKIAARNAFRQAFMNAKPILLEPIM HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH RLEVVVPESYMGDIMGDLNKKRGRIAGMEPTGDGKQIIKAMVPLAEMHRYAIDLRSMTQG HEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RGQFTMEFDHYEEAPAQVAKAVIDAAQASRKEESE CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDLRRFAVEKVRNVALIAHGGAGKTSLAEAMLFTAGATDRLGRVDEGNTVMDYDPEEIRR CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCHHCCCCCCCCEEECCCHHHHHH KVSISMGIAPLEWKGHKFNLLDTPGYFDFVGEVKAALRVVETAVLVVDAVAGIEVGAELT HHHHHCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH YEHARKAGVSRMIVINKMDRENANFRKTLSALEEAWGRGVVALHLPIGAEASFSGVVDVV HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH RQKAYTFSGKQVKEEAVPAEFDGQVAEIREKLMELAAEADDELTMKFLEEGELTQEELER HHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHC GLRLGVVKGDIVPVFVAAAARNIGVSALMDAIVAYGPSPADRGDLVGQTPDGEPVSQPIG CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ENQPFSALVFKTTADPFVGRMTVMRVFNGKITSDQTVYNVTRGRSERIGNIFIPKGKGQE CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCC PVTEAGPGDIIAVAKLAVTQTNDSLGEEANPLVLEPVDFPAPVYSVAVSPKSKGDEEKIG CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHH SGLQRLAEEDATFTVRRDPVTHETILSGLGETHVDVMIERLKRKFGVEAVLSEPKVAYKE HHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH TIRGRAQGEYKHKKQTGGRGQYGHCKIEIEPLPEGEYEFVDKIFAGAIPLNFRPAVDKGV HHCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHH QETMAEGVLAGYPVTGVRCTLLDGSYHEVDSSEMAFKIAARNAFRQAFMNAKPILLEPIM HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH RLEVVVPESYMGDIMGDLNKKRGRIAGMEPTGDGKQIIKAMVPLAEMHRYAIDLRSMTQG HEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RGQFTMEFDHYEEAPAQVAKAVIDAAQASRKEESE CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA