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The map label for this gene is tdk [H]

Identifier: 51894174

GI number: 51894174

Start: 3253919

End: 3254506

Strand: Reverse

Name: tdk [H]

Synonym: STH3038

Alternate gene names: 51894174

Gene position: 3254506-3253919 (Counterclockwise)

Preceding gene: 51894175

Following gene: 51894172

Centisome position: 91.26

GC content: 64.8

Gene sequence:

>588_bases
TTGCACCGTAATCTCAACTACGGATGGATCGATGTCATCACCTCGGGCAGCATGTACGCCGGCAAGACGACCGAGCTGAT
CCGCCGGGTCCGAACGTTCATCCTGGCGAAGCGGACCGCCGTCGTCTTCCAGCCGCGCATGGCCAAACGGTATACCGACG
ACGAGGTGATCGTGACCCATGACGGGCTCCGGTTCGAGGCGGTCCACACCGACAGCCCGCTGGAGATCCTCTGGTATGCT
GAGATCCACAAGCCCGACGTGATCGGCATCGACGAGGCGCAGTTCTACGACGTGTCGCTGGTGGACACGGTGCAGGAGCT
GGCCAACCGCGGCCATTACGTGATCGCAGCCGGACTGTCGCAGACGTCGGAGGGCAGGCCCTTCGGCTGCATGCCCCAGC
TGCTGGCCCTGGCGGACAGCATCACGTCCGTATACGGGGTGTGCGTCGTCTGTGGCGAACCGGCCACCAAGCCGTTCGCG
CTTACCGCGAAGACCGAGGACGTGGTGGTGGGTGGCGGCGAAAAGTACGAGGCCCGCTGCCGCAAGTGCTGGCTGGAGGG
GAGAAGGGCCCGGGGCGAGCAATGTTGA

Upstream 100 bases:

>100_bases
GCCTCCCCCCGGTCCTGAGATTGGGAGCGGGGCGGAGGAATCGCCGGTCGGCGCCTCGAAACCCCTGTAGGAATCGTAGC
AGCCAGGGGAGGCGCCGACG

Downstream 100 bases:

>100_bases
AAGGGCCGTCCTCGTGGCGTTGCCGGCAGGGGCGGCGGGGCCTCACGGGTGCGGCGGTTTTGCAAACTTCAACCCGTACG
AGTAGGGCCCCACGTCGCAG

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MHRNLNYGWIDVITSGSMYAGKTTELIRRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTHDGLRFEAVHTDSPLEILWYA
EIHKPDVIGIDEAQFYDVSLVDTVQELANRGHYVIAAGLSQTSEGRPFGCMPQLLALADSITSVYGVCVVCGEPATKPFA
LTAKTEDVVVGGGEKYEARCRKCWLEGRRARGEQC

Sequences:

>Translated_195_residues
MHRNLNYGWIDVITSGSMYAGKTTELIRRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTHDGLRFEAVHTDSPLEILWYA
EIHKPDVIGIDEAQFYDVSLVDTVQELANRGHYVIAAGLSQTSEGRPFGCMPQLLALADSITSVYGVCVVCGEPATKPFA
LTAKTEDVVVGGGEKYEARCRKCWLEGRRARGEQC
>Mature_195_residues
MHRNLNYGWIDVITSGSMYAGKTTELIRRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTHDGLRFEAVHTDSPLEILWYA
EIHKPDVIGIDEAQFYDVSLVDTVQELANRGHYVIAAGLSQTSEGRPFGCMPQLLALADSITSVYGVCVVCGEPATKPFA
LTAKTEDVVVGGGEKYEARCRKCWLEGRRARGEQC

Specific function: Unknown

COG id: COG1435

COG function: function code F; Thymidine kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine kinase family [H]

Homologues:

Organism=Homo sapiens, GI164698438, Length=190, Percent_Identity=36.3157894736842, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17543396, Length=183, Percent_Identity=37.1584699453552, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001267
- InterPro:   IPR020633
- InterPro:   IPR020634 [H]

Pfam domain/function: PF00265 TK [H]

EC number: =2.7.1.21 [H]

Molecular weight: Translated: 21773; Mature: 21773

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00603 TK_CELLULAR_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRNLNYGWIDVITSGSMYAGKTTELIRRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTH
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCCEEEEE
DGLRFEAVHTDSPLEILWYAEIHKPDVIGIDEAQFYDVSLVDTVQELANRGHYVIAAGLS
CCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCEEEHHHHHHHHHHHCCCCEEEEECCC
QTSEGRPFGCMPQLLALADSITSVYGVCVVCGEPATKPFALTAKTEDVVVGGGEKYEARC
CCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHH
RKCWLEGRRARGEQC
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MHRNLNYGWIDVITSGSMYAGKTTELIRRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTH
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCCEEEEE
DGLRFEAVHTDSPLEILWYAEIHKPDVIGIDEAQFYDVSLVDTVQELANRGHYVIAAGLS
CCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCEEEHHHHHHHHHHHCCCCEEEEECCC
QTSEGRPFGCMPQLLALADSITSVYGVCVVCGEPATKPFALTAKTEDVVVGGGEKYEARC
CCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHH
RKCWLEGRRARGEQC
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA