Click here to switch to the map view.

The map label for this gene is 51894172

Identifier: 51894172

GI number: 51894172

Start: 3252824

End: 3253216

Strand: Reverse

Name: 51894172

Synonym: STH3036

Alternate gene names: NA

Gene position: 3253216-3252824 (Counterclockwise)

Preceding gene: 51894174

Following gene: 51894171

Centisome position: 91.23

GC content: 72.52

Gene sequence:

>393_bases
ATGTCGCTTGCGCCCGGTCTCACCGCGACGGCCGAGACGGTGGTGACGCCGGAGAACTGCGCCAGGGCCGTGGGCAGCGG
CGCGGTGGACGTGTTCGCGACGCCGATGATGATTGCGCTCATGGAGGAGGCGGCGGCCAGGGCGGTGGAGCCGTTCCTCG
GGGAGGGCGAGACCACCGTGGGCACCCGGGTCGACGTCGAGCACCTCGCCGCGACGCCGCCGGGGATGAAGGTCCGGGCC
ACCGCCGTGCTGGAGCGGGTGGACGGGCGGCGGCTGCTGTTCCGGGTCGAGGCGTTCGACGACCGGGAGCGGGTCGGAAG
CGGCACCCACGAGCGGGTCATCGTGCGCATGGAGAGGTTCCTCCAGCGGGCGGGGGAAAAGCGGTTGCCTTAA

Upstream 100 bases:

>100_bases
CGCGCTGAGGATCGAACCTGTGGACCACCGCTCATCACTCCTTTGTCTGTCTGGAGTTTGGACGTCTGGCGGATGACGAT
TAGCACGGGAGGGAGATCAC

Downstream 100 bases:

>100_bases
ATGCTTTAACGTGCTAAACTTCCTCCAAACCCGATGGAGGTGTTCCAGAGTTGGCTCAGCCTACCTACCACATTGCCTGC
CTCCCGGGCGACGGGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Dihydrolipoamide Acyltransferase; Thioesterase Superfamily; Thioesterase 4HBT Family; Thioesterase-Like Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSLAPGLTATAETVVTPENCARAVGSGAVDVFATPMMIALMEEAAARAVEPFLGEGETTVGTRVDVEHLAATPPGMKVRA
TAVLERVDGRRLLFRVEAFDDRERVGSGTHERVIVRMERFLQRAGEKRLP

Sequences:

>Translated_130_residues
MSLAPGLTATAETVVTPENCARAVGSGAVDVFATPMMIALMEEAAARAVEPFLGEGETTVGTRVDVEHLAATPPGMKVRA
TAVLERVDGRRLLFRVEAFDDRERVGSGTHERVIVRMERFLQRAGEKRLP
>Mature_129_residues
SLAPGLTATAETVVTPENCARAVGSGAVDVFATPMMIALMEEAAARAVEPFLGEGETTVGTRVDVEHLAATPPGMKVRAT
AVLERVDGRRLLFRVEAFDDRERVGSGTHERVIVRMERFLQRAGEKRLP

Specific function: Unknown

COG id: COG5496

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14047; Mature: 13916

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAPGLTATAETVVTPENCARAVGSGAVDVFATPMMIALMEEAAARAVEPFLGEGETTV
CCCCCCCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GTRVDVEHLAATPPGMKVRATAVLERVDGRRLLFRVEAFDDRERVGSGTHERVIVRMERF
CCCCCHHHHHCCCCCCEEHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCHHHHHHHHHHH
LQRAGEKRLP
HHHHCCCCCC
>Mature Secondary Structure 
SLAPGLTATAETVVTPENCARAVGSGAVDVFATPMMIALMEEAAARAVEPFLGEGETTV
CCCCCCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GTRVDVEHLAATPPGMKVRATAVLERVDGRRLLFRVEAFDDRERVGSGTHERVIVRMERF
CCCCCHHHHHCCCCCCEEHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCHHHHHHHHHHH
LQRAGEKRLP
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA