Click here to switch to the map view.

The map label for this gene is fliQ [H]

Identifier: 51894126

GI number: 51894126

Start: 3212269

End: 3212538

Strand: Reverse

Name: fliQ [H]

Synonym: STH2990

Alternate gene names: 51894126

Gene position: 3212538-3212269 (Counterclockwise)

Preceding gene: 51894127

Following gene: 51894125

Centisome position: 90.08

GC content: 65.56

Gene sequence:

>270_bases
GTGACTCCGGAATTCGCCCTGGATCTTGCACAGGAAGCGGTGCGGGTTGCGCTTTACGTGGCGGCGCCCGTCATCGGACT
CAGCCTCCTGGTGGGCCTCATCATCTCGCTGTTCCAGGCGACCACCCAGGTGCACGAGCCGTCGCTGCAGTTTGTGCCCA
AGATTCTCGCGGCGGTGGCGGGTCTGGTCGTGTTCGGGCCCTGGATGCTCACCACCCTCATGGATTTCGCCCGGCGCGTG
ATGGACCTGCTGCCCCGGATGGTGCGCTGA

Upstream 100 bases:

>100_bases
GCTGCCCTTCAAGGTGCTGCTCTTCGTGCTGGTCGACGGCTGGCACCTCGTGGTGGAGTCGCTGGTCCGAAGTTTCACGG
GATAAGGGGGGCGAAGGCAC

Downstream 100 bases:

>100_bases
CGGCCGATGGAACAGCTCTACGCGCAGCTCGCCGCCCTCCTGCTGGGCGCTTCCCGGGCCATGGGCGTCTTCACCGCAGC
GCCCGTCTTCTCCACCCGGT

Product: flagellar biosynthetic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTPEFALDLAQEAVRVALYVAAPVIGLSLLVGLIISLFQATTQVHEPSLQFVPKILAAVAGLVVFGPWMLTTLMDFARRV
MDLLPRMVR

Sequences:

>Translated_89_residues
MTPEFALDLAQEAVRVALYVAAPVIGLSLLVGLIISLFQATTQVHEPSLQFVPKILAAVAGLVVFGPWMLTTLMDFARRV
MDLLPRMVR
>Mature_88_residues
TPEFALDLAQEAVRVALYVAAPVIGLSLLVGLIISLFQATTQVHEPSLQFVPKILAAVAGLVVFGPWMLTTLMDFARRVM
DLLPRMVR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

Organism=Escherichia coli, GI1788260, Length=88, Percent_Identity=44.3181818181818, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9750; Mature: 9619

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEFALDLAQEAVRVALYVAAPVIGLSLLVGLIISLFQATTQVHEPSLQFVPKILAAVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GLVVFGPWMLTTLMDFARRVMDLLPRMVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPEFALDLAQEAVRVALYVAAPVIGLSLLVGLIISLFQATTQVHEPSLQFVPKILAAVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GLVVFGPWMLTTLMDFARRVMDLLPRMVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]