Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is yitW [H]

Identifier: 51894080

GI number: 51894080

Start: 3169067

End: 3169408

Strand: Reverse

Name: yitW [H]

Synonym: STH2944

Alternate gene names: 51894080

Gene position: 3169408-3169067 (Counterclockwise)

Preceding gene: 51894081

Following gene: 51894079

Centisome position: 88.88

GC content: 68.42

Gene sequence:

>342_bases
ATGAACAACTCCGCCGACCTCCGCCGGGAGCCGACCCGGCCTGCGGACCGGGAGGCGCTGGCGCGCACGCTGCTCCGCAA
TGTCTACGATCCGGAGATCGGCCTGAACATCATCGACCTGGGCCTGGTCTACGATCTCCAGGTCGACGAGCAGGACCGCT
GCCGGGTGCTCATGACCTTCACCACCGCCGGCTGCCCGGTGGGCGGCCACCTGGTGAACGAGGTCTACGAGGCCCTGACG
GTGCTTGGCTTTGCCGACGTGAAGGTCGACATCACCTTCGATCCGCCGTGGTCGCCCCAGCGGATGTCGCCCGAGGCCCG
GCAGCAGCTCGGCTGGCCGTAA

Upstream 100 bases:

>100_bases
GGAGCGCCATACTAAACCTGACCGGCAGCCTGCTGTTCGCCGGCACCATCCTCCAAGTGCTTCGGGCCAGGCCGCTGGAC
GGAAGGGAGCGATCCATGGG

Downstream 100 bases:

>100_bases
GCGGATACGCGCCCGCGTTCCCGCCATTGGCATCCGGCCCGAAGTGCGTTACCATAGCGGGTGTGACCCTGATTCAAGCC
TGAACCAAAGGAGCGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MNNSADLRREPTRPADREALARTLLRNVYDPEIGLNIIDLGLVYDLQVDEQDRCRVLMTFTTAGCPVGGHLVNEVYEALT
VLGFADVKVDITFDPPWSPQRMSPEARQQLGWP

Sequences:

>Translated_113_residues
MNNSADLRREPTRPADREALARTLLRNVYDPEIGLNIIDLGLVYDLQVDEQDRCRVLMTFTTAGCPVGGHLVNEVYEALT
VLGFADVKVDITFDPPWSPQRMSPEARQQLGWP
>Mature_113_residues
MNNSADLRREPTRPADREALARTLLRNVYDPEIGLNIIDLGLVYDLQVDEQDRCRVLMTFTTAGCPVGGHLVNEVYEALT
VLGFADVKVDITFDPPWSPQRMSPEARQQLGWP

Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

Organism=Escherichia coli, GI226510939, Length=88, Percent_Identity=38.6363636363636, Blast_Score=59, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 12741; Mature: 12741

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSADLRREPTRPADREALARTLLRNVYDPEIGLNIIDLGLVYDLQVDEQDRCRVLMTF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
TTAGCPVGGHLVNEVYEALTVLGFADVKVDITFDPPWSPQRMSPEARQQLGWP
ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MNNSADLRREPTRPADREALARTLLRNVYDPEIGLNIIDLGLVYDLQVDEQDRCRVLMTF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE
TTAGCPVGGHLVNEVYEALTVLGFADVKVDITFDPPWSPQRMSPEARQQLGWP
ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]