| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is prsA [H]
Identifier: 51894079
GI number: 51894079
Start: 3168074
End: 3168967
Strand: Reverse
Name: prsA [H]
Synonym: STH2943
Alternate gene names: 51894079
Gene position: 3168967-3168074 (Counterclockwise)
Preceding gene: 51894080
Following gene: 51894078
Centisome position: 88.86
GC content: 66.11
Gene sequence:
>894_bases GTGTTGGCCAACGGGAATAACCGGGCGACGATCGCCCTGGCCGTGGTGGCCACCCTGGTGGTGGCAGGACTCGGCGGCTA CTTCGTGGGCAGCAGCCTGCAGCGGCCCGGCACCGGCAACGATCCCGCCGTGGTCGCGACGGTCAACGGCGAGCAGATCA CCCGGGACGAAGTGCACCAGAAGCTGATGACCTACTACGGGGCAGCCGTCGTCGACGACATGATTCTCACCCGCCTCGTG GATCAGGAAGCCGCCAGGGCGGGCGTGACCGTGACCGATGCCGAGGTGGAGGAGGAGGTCGAGGCGACCAAGGCCGCGTA CGGCGGCGACCTGTACTTCTCCTGGGCGCTGAGCCAGTATGGGCTGAGCGAGGCGCAGTTCCGCGACATGCTGCGCCGGG ACATGGTCGCCACCGCTGTGCTCCGCCAGCAGCTGCAGCCGGACGATGCCACGCTGAAGGCGTACTTCGACGAGATGCAG AGCGCGGAACAGACTCGGAAGATCAAGGTGCGCCACATCCTCGTCGACACGGAGGAGAAGGCCAACGAGATTAAGGCCCG GCTGGACGCCGGCGCCGACTTCGCCCAGCTCGCGCAGGCGGAGTCCAAGGACACGGCCAGCGCCGCCAAGGGCGGCGACC TGGGTCTGATCGGCAAGGGCGACACCGTCTCCGAGTTTGAGGCAGCAGCCTTCGCCCTGAACGACGGTGAGATCTCCGCC CCCGTGCAGAGCACGTACGGCTGGCACATCATCCAGGCCTACCAGTTGCACTTTGAGCAGGAGAAGCAGACCATTCTGGA GCAGTATCTGAACGAGAAGGTGAGCGCGCGGCTGGGCACCTGGTACAGCGAACTGCGGGAGAACGCCCAGATCACGAACA CGCTCGCCCAGTAA
Upstream 100 bases:
>100_bases AGCGGATACGCGCCCGCGTTCCCGCCATTGGCATCCGGCCCGAAGTGCGTTACCATAGCGGGTGTGACCCTGATTCAAGC CTGAACCAAAGGAGCGTGGC
Downstream 100 bases:
>100_bases GCGCCTGAGACCGGGCCAGGCCAGGGGGCAACCTCCTGGCCTGCTGGTGCATGAACGGGGGTGGTGTCGGGTGGACCCGC GCGCGCGCTGGCGGCTCTTC
Product: putative post-translocation molecular chaperone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLANGNNRATIALAVVATLVVAGLGGYFVGSSLQRPGTGNDPAVVATVNGEQITRDEVHQKLMTYYGAAVVDDMILTRLV DQEAARAGVTVTDAEVEEEVEATKAAYGGDLYFSWALSQYGLSEAQFRDMLRRDMVATAVLRQQLQPDDATLKAYFDEMQ SAEQTRKIKVRHILVDTEEKANEIKARLDAGADFAQLAQAESKDTASAAKGGDLGLIGKGDTVSEFEAAAFALNDGEISA PVQSTYGWHIIQAYQLHFEQEKQTILEQYLNEKVSARLGTWYSELRENAQITNTLAQ
Sequences:
>Translated_297_residues MLANGNNRATIALAVVATLVVAGLGGYFVGSSLQRPGTGNDPAVVATVNGEQITRDEVHQKLMTYYGAAVVDDMILTRLV DQEAARAGVTVTDAEVEEEVEATKAAYGGDLYFSWALSQYGLSEAQFRDMLRRDMVATAVLRQQLQPDDATLKAYFDEMQ SAEQTRKIKVRHILVDTEEKANEIKARLDAGADFAQLAQAESKDTASAAKGGDLGLIGKGDTVSEFEAAAFALNDGEISA PVQSTYGWHIIQAYQLHFEQEKQTILEQYLNEKVSARLGTWYSELRENAQITNTLAQ >Mature_297_residues MLANGNNRATIALAVVATLVVAGLGGYFVGSSLQRPGTGNDPAVVATVNGEQITRDEVHQKLMTYYGAAVVDDMILTRLV DQEAARAGVTVTDAEVEEEVEATKAAYGGDLYFSWALSQYGLSEAQFRDMLRRDMVATAVLRQQLQPDDATLKAYFDEMQ SAEQTRKIKVRHILVDTEEKANEIKARLDAGADFAQLAQAESKDTASAAKGGDLGLIGKGDTVSEFEAAAFALNDGEISA PVQSTYGWHIIQAYQLHFEQEKQTILEQYLNEKVSARLGTWYSELRENAQITNTLAQ
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF05698 Trigger_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 32375; Mature: 32375
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANGNNRATIALAVVATLVVAGLGGYFVGSSLQRPGTGNDPAVVATVNGEQITRDEVHQ CCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH KLMTYYGAAVVDDMILTRLVDQEAARAGVTVTDAEVEEEVEATKAAYGGDLYFSWALSQY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCEEEHHHHHH GLSEAQFRDMLRRDMVATAVLRQQLQPDDATLKAYFDEMQSAEQTRKIKVRHILVDTEEK CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHH ANEIKARLDAGADFAQLAQAESKDTASAAKGGDLGLIGKGDTVSEFEAAAFALNDGEISA HHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCEEEECCCCCHHHHHHHHEEECCCCCCC PVQSTYGWHIIQAYQLHFEQEKQTILEQYLNEKVSARLGTWYSELRENAQITNTLAQ CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MLANGNNRATIALAVVATLVVAGLGGYFVGSSLQRPGTGNDPAVVATVNGEQITRDEVHQ CCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH KLMTYYGAAVVDDMILTRLVDQEAARAGVTVTDAEVEEEVEATKAAYGGDLYFSWALSQY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCEEEHHHHHH GLSEAQFRDMLRRDMVATAVLRQQLQPDDATLKAYFDEMQSAEQTRKIKVRHILVDTEEK CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHH ANEIKARLDAGADFAQLAQAESKDTASAAKGGDLGLIGKGDTVSEFEAAAFALNDGEISA HHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCEEEECCCCCHHHHHHHHEEECCCCCCC PVQSTYGWHIIQAYQLHFEQEKQTILEQYLNEKVSARLGTWYSELRENAQITNTLAQ CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA