| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894055
Identifier: 51894055
GI number: 51894055
Start: 3147884
End: 3148777
Strand: Reverse
Name: 51894055
Synonym: STH2919
Alternate gene names: NA
Gene position: 3148777-3147884 (Counterclockwise)
Preceding gene: 51894056
Following gene: 51894054
Centisome position: 88.3
GC content: 68.12
Gene sequence:
>894_bases GTGGAGATCCTGCAGGCGATCCAGACCATCCAGTCCCCGCTGTTGGACCGGGTGTTGGGACTGATCACCAACCTGCACCA CGAGGCGGTCTACATCCTGGTCCTTCCGCTCATCTACTGGCTCTACGACAAGCGCTTCGGCCGGTACATGTTCTCGGTGT TCGTCATCGGCTTCTGGTCCAATGACTTCCTGAAAGAGGTGTTCCGGACGCCCCGCCCTGACCCCGCCCAGGTGCGGGTG ATCCTGGCCGAGACGGGAGGCGGCTACGCCTTCCCCAGCGGCCACGCGCAGACCCCGCTGGTCTTCTGGGGGGCGATCGC CGACCACGTGCGGCGGCGCTGGTTCACGTGGGCGGCGGGCATCCTCGTCTTCCTCATCGGGTTCTCCCGGCTCTATATCG GCGTCCACTGGCCGCTGGACGTGATCGGCGGCTGGGCCATCGGCCTCGTCGTCCTCTGGCTGATGGTGCGCAGCCGGCGG TTCTGGACCGGCGAGGGGCAGTCGCTGGGCCTGCAGGCGCTGCTGGCGTTCCTCCTGCCCGGCGCGGCCCTGGGGCTGCT CGCGCTGCTGGGCCCGGTGGACGAGATCGCCTGGATGGTCATGGGCACCTGGAGCGGGCTGCTGCTGGGGTCCGCCCTGG AGGAGCAGTGGGTGCGGTTTGACCCGCGCGCCGGCACGCCGCTGCAGCACTTGTTGAAGATCATCGTAGGGATCGTGCTG GTACTGGCGGCGAAGGAAGGGCTGAAGCTGGTGCTGCCGGACAGCGGCGTCGGCGACATGGTGCGGTACGGGCTGGTCGC GTTCACGGCGACGCTGGTGGCGCCGTGGCTCTTCGCGCGGTTCATTGCCCGGCCGCCGGCGGTGCAGTTGGAACAGAAGA CGCATCACTTGTAG
Upstream 100 bases:
>100_bases CGGGGTGCCGGCGACGGTGATCAGCGCCGCACAGTAATCGCGGACGCCCCGGACCCATAGAATGACAGGACAGGTGGAAG GGGTGGGTGACATGTCGGGC
Downstream 100 bases:
>100_bases GAAACGTCGTCCCACGAGGGGGAAGCCTGGGTGCTGAAGGCCCGGAAGGTGCATTTCATCGGAGTCGGTGGCTACGGCAT GAGCGCGCTGGCCATGGTGC
Product: putative phosphatase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Protein; Phosphatase; Phosphatase PAP2 Family; Membrane-Associated Phosphatase; Membrane-Associated Phospholipid Phosphatase; Pap2 Family Protein; Phospholipid Phosphatase; Glycerophosphoryl Diester Phosphodiesterase; PAP2 Family Phosphatase; Membrane Associated Acid Phosphatase; PA-Phosphatase-Like Phosphoesterase; Phosphoesterase PA-Phosphatase-Like Protein
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MEILQAIQTIQSPLLDRVLGLITNLHHEAVYILVLPLIYWLYDKRFGRYMFSVFVIGFWSNDFLKEVFRTPRPDPAQVRV ILAETGGGYAFPSGHAQTPLVFWGAIADHVRRRWFTWAAGILVFLIGFSRLYIGVHWPLDVIGGWAIGLVVLWLMVRSRR FWTGEGQSLGLQALLAFLLPGAALGLLALLGPVDEIAWMVMGTWSGLLLGSALEEQWVRFDPRAGTPLQHLLKIIVGIVL VLAAKEGLKLVLPDSGVGDMVRYGLVAFTATLVAPWLFARFIARPPAVQLEQKTHHL
Sequences:
>Translated_297_residues MEILQAIQTIQSPLLDRVLGLITNLHHEAVYILVLPLIYWLYDKRFGRYMFSVFVIGFWSNDFLKEVFRTPRPDPAQVRV ILAETGGGYAFPSGHAQTPLVFWGAIADHVRRRWFTWAAGILVFLIGFSRLYIGVHWPLDVIGGWAIGLVVLWLMVRSRR FWTGEGQSLGLQALLAFLLPGAALGLLALLGPVDEIAWMVMGTWSGLLLGSALEEQWVRFDPRAGTPLQHLLKIIVGIVL VLAAKEGLKLVLPDSGVGDMVRYGLVAFTATLVAPWLFARFIARPPAVQLEQKTHHL >Mature_297_residues MEILQAIQTIQSPLLDRVLGLITNLHHEAVYILVLPLIYWLYDKRFGRYMFSVFVIGFWSNDFLKEVFRTPRPDPAQVRV ILAETGGGYAFPSGHAQTPLVFWGAIADHVRRRWFTWAAGILVFLIGFSRLYIGVHWPLDVIGGWAIGLVVLWLMVRSRR FWTGEGQSLGLQALLAFLLPGAALGLLALLGPVDEIAWMVMGTWSGLLLGSALEEQWVRFDPRAGTPLQHLLKIIVGIVL VLAAKEGLKLVLPDSGVGDMVRYGLVAFTATLVAPWLFARFIARPPAVQLEQKTHHL
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33197; Mature: 33197
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILQAIQTIQSPLLDRVLGLITNLHHEAVYILVLPLIYWLYDKRFGRYMFSVFVIGFWS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NDFLKEVFRTPRPDPAQVRVILAETGGGYAFPSGHAQTPLVFWGAIADHVRRRWFTWAAG HHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILVFLIGFSRLYIGVHWPLDVIGGWAIGLVVLWLMVRSRRFWTGEGQSLGLQALLAFLLP HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC GAALGLLALLGPVDEIAWMVMGTWSGLLLGSALEEQWVRFDPRAGTPLQHLLKIIVGIVL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VLAAKEGLKLVLPDSGVGDMVRYGLVAFTATLVAPWLFARFIARPPAVQLEQKTHHL HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC >Mature Secondary Structure MEILQAIQTIQSPLLDRVLGLITNLHHEAVYILVLPLIYWLYDKRFGRYMFSVFVIGFWS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NDFLKEVFRTPRPDPAQVRVILAETGGGYAFPSGHAQTPLVFWGAIADHVRRRWFTWAAG HHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILVFLIGFSRLYIGVHWPLDVIGGWAIGLVVLWLMVRSRRFWTGEGQSLGLQALLAFLLP HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC GAALGLLALLGPVDEIAWMVMGTWSGLLLGSALEEQWVRFDPRAGTPLQHLLKIIVGIVL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VLAAKEGLKLVLPDSGVGDMVRYGLVAFTATLVAPWLFARFIARPPAVQLEQKTHHL HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA