| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894002
Identifier: 51894002
GI number: 51894002
Start: 3087853
End: 3088305
Strand: Reverse
Name: 51894002
Synonym: STH2864
Alternate gene names: NA
Gene position: 3088305-3087853 (Counterclockwise)
Preceding gene: 51894003
Following gene: 51893999
Centisome position: 86.6
GC content: 68.21
Gene sequence:
>453_bases ATGGCATCCTGGCTGTTCTGGCTGATCATCATCCTCGGTGGCGTTGCCGGCGCGGTGCAAGCGCCGGTGAACGCCACGCT GGCCCAGCACATCCGACCCATTCCGGCATCGCTGGTCTCGTTCATCGTCGGTGGGACCGCGCTGCTGGCACTCACCCTGT TCACCCTGCGGGGACAGGGGCTGTCCGGCCTGGGCCAGGGGCTTTCGACCGCACCGCCGTGGAGCTTCCTGGGCGGCCTG TGCGGCGCGATGGTGGTCAGCTCCGTGATCGTGGGAACCGGCGCCATCGGCGCAAACGCCACGCTCAGCCTGCTGACCGG CGTGCAGCTCATTGCCGCCCTGGTGATCGACGCCATCGGCTTCGGAACGGCCGGTCCGATTCCGATCCGGTGGCCCCAGG TGCTCGGTGTGCTGCTCATCATCGGCGGGATGAAGCTGGTGCTCACGCGGTGA
Upstream 100 bases:
>100_bases TCCTCGGGTAAAGTCGCGACGGAGGAGTTTTCCCGCCGCCGCCGAACAGATGAAGGGTTGTGCGGGTTCGCGGGACCCGA AATGTGAAGGAGGCGGCGGG
Downstream 100 bases:
>100_bases GCGGGGGATCATGCGGGAGGCCCCGCCCTGCCTGGCCAGGCAGGGCGGGGCCTCCGGTCGAAACGGGGCGGCGGCTGACC GCCGGAAAGGCGCCTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MASWLFWLIIILGGVAGAVQAPVNATLAQHIRPIPASLVSFIVGGTALLALTLFTLRGQGLSGLGQGLSTAPPWSFLGGL CGAMVVSSVIVGTGAIGANATLSLLTGVQLIAALVIDAIGFGTAGPIPIRWPQVLGVLLIIGGMKLVLTR
Sequences:
>Translated_150_residues MASWLFWLIIILGGVAGAVQAPVNATLAQHIRPIPASLVSFIVGGTALLALTLFTLRGQGLSGLGQGLSTAPPWSFLGGL CGAMVVSSVIVGTGAIGANATLSLLTGVQLIAALVIDAIGFGTAGPIPIRWPQVLGVLLIIGGMKLVLTR >Mature_149_residues ASWLFWLIIILGGVAGAVQAPVNATLAQHIRPIPASLVSFIVGGTALLALTLFTLRGQGLSGLGQGLSTAPPWSFLGGLC GAMVVSSVIVGTGAIGANATLSLLTGVQLIAALVIDAIGFGTAGPIPIRWPQVLGVLLIIGGMKLVLTR
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15075; Mature: 14944
Theoretical pI: Translated: 12.06; Mature: 12.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASWLFWLIIILGGVAGAVQAPVNATLAQHIRPIPASLVSFIVGGTALLALTLFTLRGQG CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LSGLGQGLSTAPPWSFLGGLCGAMVVSSVIVGTGAIGANATLSLLTGVQLIAALVIDAIG CHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC FGTAGPIPIRWPQVLGVLLIIGGMKLVLTR CCCCCCCCCCCHHHHHHHHHHCCHHHEECC >Mature Secondary Structure ASWLFWLIIILGGVAGAVQAPVNATLAQHIRPIPASLVSFIVGGTALLALTLFTLRGQG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LSGLGQGLSTAPPWSFLGGLCGAMVVSSVIVGTGAIGANATLSLLTGVQLIAALVIDAIG CHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC FGTAGPIPIRWPQVLGVLLIIGGMKLVLTR CCCCCCCCCCCHHHHHHHHHHCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA