| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yieG [C]
Identifier: 51893999
GI number: 51893999
Start: 3083470
End: 3084807
Strand: Reverse
Name: yieG [C]
Synonym: STH2861
Alternate gene names: 51893999
Gene position: 3084807-3083470 (Counterclockwise)
Preceding gene: 51894002
Following gene: 51893998
Centisome position: 86.5
GC content: 66.44
Gene sequence:
>1338_bases GTGGCTGCTCGTGAGGCGATCCGTCCGTCCCAGACGTCCGAGGGGCTGCTCGATCGGGTCTTCAAGCTCACGGAGAACGG CACCGACGTCAAGCGGGAGATCCTGGCCGGACTGACCACGTTCGTGACCATGTCGTACATCATCGCCGTCAACCCCGACA TCCTGTCCATCGGCACCGGCATGGAGAAGTCGGCGATCTTCATGGCCACGATCCTGGCGGCGGCGCTCTCGACGCTGGCG ATGGGCCTCGTGGCCAACTGGCCGGTGGCGCTGGCGCCGGGCATGGGTCTCAACGCGTTCTTCGCCTTCACCCTGTGCGG CTCCCTCGGCCTGCCGTGGCAGCAGGCCCTGGCGGCGGTCTTCTGCTCGGGCGTGCTGGCCCTGATCGTCACCCTGACCG GGCTGCGGGAGCTGATGATCAAGGCGATCCCCCTCTCGCTGCGGCACGCGGTGTCGGCCGGCATCGGCTTCTTCATCATG CTGATCGGCCTGATCAACGCCGGGATCGTCGAGGCCAGCGAGGCGACCACCATCGCCCTGGGCGATTTCAGCCGGCCGGG CACCATGCTGGCGCTGATCGGCCTCATCATCACCGGCGTCCTGGTCGCCCGCAGGGTCACCGGCGGCATCTTGCTGGGCA TTCTCATCACCACCCTCATCGGCATCCCGATGGGCGTGACCCAGCTGCCCTCCTCCCTGGTCTCGGCTCCGCCTTCGCTG GCACCCACCTTCCTGCAGCTCGACTTCGACGTCCTGGGGAACCCCGCGATGTTCGCCGTGATCTTCGCGATGTTCTTCAC CGACCTCTTCGACACGATCGGCACCTTTGTGGGCGTCTCCTCCAAGGCCGGCCTGATGGATGAGAAGGGCAACATGAAGG GCGGCAACCGGGCCCTGGTCATGGACTCGCTGGGCACCATCATCGGCTCGCTGCTGGGCACCTCCAACACCACCACCTAC GTCGAGTCCGCGGCGGGCGTCTCGGCCGGCGGCCGCACGGGGCTCACCGCCGTCACGGTGGCGGTCCTGTTCCTCCTGTC CTCTTTCTTCTCCGACATCTTCCTGGCCATCCCCGGCGCCGCGACGGCTCCCGCCCTCATCATCGTGGGTATCATGATGG CCTCCTCCATCACCCAGATCGACCTGGACGACTTCGCCATCGCCCTGCCGGCGATCATCACGGCCCTCATGATGCCGTTT GCGTACTCCATCGCCGAGGGCCTCGCGCTGGGCTTCATCGCCTACGCCGTGATCTACCTGCTCACCGGCCGGGCCAAGGA AGTCCACTGGATGATGTGGGTGCTCGCCGGCTTCTTCATCCTGCACTTCGTCCTCTAG
Upstream 100 bases:
>100_bases AGGTTTCCCTCCAGGCGGGAGGAGACCTGCCCGCCTATCGTTCGGGTTCCGGGGGTTCGTGCATCATCATTCCATCATCT GGTTTGGGAGGCGTTTGTCT
Downstream 100 bases:
>100_bases GCCATACCGGGCACAACACAACCTCGCCGACACGCAGCGGGGCTCGGGCAAGACCCCGGGCCCCGCTCGACTTCCCTTGC GGCGAGACCGCAGGAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAAREAIRPSQTSEGLLDRVFKLTENGTDVKREILAGLTTFVTMSYIIAVNPDILSIGTGMEKSAIFMATILAAALSTLA MGLVANWPVALAPGMGLNAFFAFTLCGSLGLPWQQALAAVFCSGVLALIVTLTGLRELMIKAIPLSLRHAVSAGIGFFIM LIGLINAGIVEASEATTIALGDFSRPGTMLALIGLIITGVLVARRVTGGILLGILITTLIGIPMGVTQLPSSLVSAPPSL APTFLQLDFDVLGNPAMFAVIFAMFFTDLFDTIGTFVGVSSKAGLMDEKGNMKGGNRALVMDSLGTIIGSLLGTSNTTTY VESAAGVSAGGRTGLTAVTVAVLFLLSSFFSDIFLAIPGAATAPALIIVGIMMASSITQIDLDDFAIALPAIITALMMPF AYSIAEGLALGFIAYAVIYLLTGRAKEVHWMMWVLAGFFILHFVL
Sequences:
>Translated_445_residues MAAREAIRPSQTSEGLLDRVFKLTENGTDVKREILAGLTTFVTMSYIIAVNPDILSIGTGMEKSAIFMATILAAALSTLA MGLVANWPVALAPGMGLNAFFAFTLCGSLGLPWQQALAAVFCSGVLALIVTLTGLRELMIKAIPLSLRHAVSAGIGFFIM LIGLINAGIVEASEATTIALGDFSRPGTMLALIGLIITGVLVARRVTGGILLGILITTLIGIPMGVTQLPSSLVSAPPSL APTFLQLDFDVLGNPAMFAVIFAMFFTDLFDTIGTFVGVSSKAGLMDEKGNMKGGNRALVMDSLGTIIGSLLGTSNTTTY VESAAGVSAGGRTGLTAVTVAVLFLLSSFFSDIFLAIPGAATAPALIIVGIMMASSITQIDLDDFAIALPAIITALMMPF AYSIAEGLALGFIAYAVIYLLTGRAKEVHWMMWVLAGFFILHFVL >Mature_444_residues AAREAIRPSQTSEGLLDRVFKLTENGTDVKREILAGLTTFVTMSYIIAVNPDILSIGTGMEKSAIFMATILAAALSTLAM GLVANWPVALAPGMGLNAFFAFTLCGSLGLPWQQALAAVFCSGVLALIVTLTGLRELMIKAIPLSLRHAVSAGIGFFIML IGLINAGIVEASEATTIALGDFSRPGTMLALIGLIITGVLVARRVTGGILLGILITTLIGIPMGVTQLPSSLVSAPPSLA PTFLQLDFDVLGNPAMFAVIFAMFFTDLFDTIGTFVGVSSKAGLMDEKGNMKGGNRALVMDSLGTIIGSLLGTSNTTTYV ESAAGVSAGGRTGLTAVTVAVLFLLSSFFSDIFLAIPGAATAPALIIVGIMMASSITQIDLDDFAIALPAIITALMMPFA YSIAEGLALGFIAYAVIYLLTGRAKEVHWMMWVLAGFFILHFVL
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=439, Percent_Identity=45.1025056947608, Blast_Score=355, Evalue=3e-99, Organism=Escherichia coli, GI87082309, Length=435, Percent_Identity=42.7586206896552, Blast_Score=352, Evalue=2e-98, Organism=Escherichia coli, GI1790499, Length=428, Percent_Identity=36.6822429906542, Blast_Score=244, Evalue=7e-66, Organism=Escherichia coli, GI48994909, Length=432, Percent_Identity=36.5740740740741, Blast_Score=228, Evalue=5e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46390; Mature: 46259
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAREAIRPSQTSEGLLDRVFKLTENGTDVKREILAGLTTFVTMSYIIAVNPDILSIGTG CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEECCCC MEKSAIFMATILAAALSTLAMGLVANWPVALAPGMGLNAFFAFTLCGSLGLPWQQALAAV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH FCSGVLALIVTLTGLRELMIKAIPLSLRHAVSAGIGFFIMLIGLINAGIVEASEATTIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE GDFSRPGTMLALIGLIITGVLVARRVTGGILLGILITTLIGIPMGVTQLPSSLVSAPPSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC APTFLQLDFDVLGNPAMFAVIFAMFFTDLFDTIGTFVGVSSKAGLMDEKGNMKGGNRALV CCHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEH MDSLGTIIGSLLGTSNTTTYVESAAGVSAGGRTGLTAVTVAVLFLLSSFFSDIFLAIPGA HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ATAPALIIVGIMMASSITQIDLDDFAIALPAIITALMMPFAYSIAEGLALGFIAYAVIYL CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGRAKEVHWMMWVLAGFFILHFVL HCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AAREAIRPSQTSEGLLDRVFKLTENGTDVKREILAGLTTFVTMSYIIAVNPDILSIGTG CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEECCCC MEKSAIFMATILAAALSTLAMGLVANWPVALAPGMGLNAFFAFTLCGSLGLPWQQALAAV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH FCSGVLALIVTLTGLRELMIKAIPLSLRHAVSAGIGFFIMLIGLINAGIVEASEATTIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEE GDFSRPGTMLALIGLIITGVLVARRVTGGILLGILITTLIGIPMGVTQLPSSLVSAPPSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC APTFLQLDFDVLGNPAMFAVIFAMFFTDLFDTIGTFVGVSSKAGLMDEKGNMKGGNRALV CCHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEH MDSLGTIIGSLLGTSNTTTYVESAAGVSAGGRTGLTAVTVAVLFLLSSFFSDIFLAIPGA HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ATAPALIIVGIMMASSITQIDLDDFAIALPAIITALMMPFAYSIAEGLALGFIAYAVIYL CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGRAKEVHWMMWVLAGFFILHFVL HCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]