Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893989

Identifier: 51893989

GI number: 51893989

Start: 3073407

End: 3073991

Strand: Reverse

Name: 51893989

Synonym: STH2851

Alternate gene names: NA

Gene position: 3073991-3073407 (Counterclockwise)

Preceding gene: 51893990

Following gene: 51893988

Centisome position: 86.2

GC content: 69.74

Gene sequence:

>585_bases
GTGCGGGTACACTCTCCGGCGGGGGCTCGCTCCCGCATCGGAGGACGCGCCGTGCGGGAGGAGGGCCCGTATCGGAGGGA
GGAATCGGCGTTGGCAGAGCAGTTCATTCTGGGCCTCGGCCTCGTGGAGGACGAGGACCGGCTGGTGATCGTGCGGAACC
GTTGGGCCGTCGGCGAGGTCTGGTCGCTGCCCGGCGGCCGGCTGGAGGTGGGCGAGTCGCTCACCGACTGCGTGGTGCGG
GAGGTGCAGGAGGAGACCGGCCTGCTGGTCGCCCCCGTGGAACTGGCGTACGTGCAGGACACGCACAACCTGGTCCATGA
TCAGCACTTCCTGGTGCACGTGTTCTCCTGCCGGCTGGTGGCCGGGACGCTGCGGGTGCCGGAGCATGACGAGTACGTGG
TGGACGTCCGGTGGGTCAAGCGCGACGAGGTCGCCCGCTACATCACCTGGCCCACCTACCGGGACCCGCTGCTGGCCTAT
CTCGCCGGCCACGAGCGGCGCTATTGGTTGGACCGGGACGGGTACCGCCCGGAGCTGGGGAAGGGGCCGGACCGGAAGGG
GAAGGAGGAAAACGGATGGCAGTGA

Upstream 100 bases:

>100_bases
GGTGCGGATCCTCGACCGGGCGGAGGCTCCCCGCGGGTAACCCGGGTCTCCGTTTGGGCAGGCCCCCCGGGCGCCTGGTG
CGGCAGGAGAACCCGGGCCC

Downstream 100 bases:

>100_bases
AGCGCGCCCTGATCAGCGTCTACGACAAGCAGGGGATCGTGGAGTTCGCACGGGGGCTGGCCGACCTGGGGGTGGAGATC
ATCTCCACGGGCGGTACGTA

Product: MutT-like protein

Products: NA

Alternate protein names: Mut-Like Protein; MutT-Like Protein; Hydrolase NUDIX Family

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEVWSLPGGRLEVGESLTDCVVR
EVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLVAGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAY
LAGHERRYWLDRDGYRPELGKGPDRKGKEENGWQ

Sequences:

>Translated_194_residues
MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEVWSLPGGRLEVGESLTDCVVR
EVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLVAGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAY
LAGHERRYWLDRDGYRPELGKGPDRKGKEENGWQ
>Mature_194_residues
MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEVWSLPGGRLEVGESLTDCVVR
EVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLVAGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAY
LAGHERRYWLDRDGYRPELGKGPDRKGKEENGWQ

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22338; Mature: 22338

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEV
CCCCCCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCE
WSLPGGRLEVGESLTDCVVREVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLV
ECCCCCCEECCHHHHHHHHHHHHHHCCEEEECEEEEEEHHHHHHHHCHHHHHHHHHHHHH
AGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAYLAGHERRYWLDRDGYRPELG
EEECCCCCCCCEEEEEEEECCHHHHEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCC
KGPDRKGKEENGWQ
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEV
CCCCCCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCE
WSLPGGRLEVGESLTDCVVREVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLV
ECCCCCCEECCHHHHHHHHHHHHHHCCEEEECEEEEEEHHHHHHHHCHHHHHHHHHHHHH
AGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAYLAGHERRYWLDRDGYRPELG
EEECCCCCCCCEEEEEEEECCHHHHEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCC
KGPDRKGKEENGWQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA