| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893989
Identifier: 51893989
GI number: 51893989
Start: 3073407
End: 3073991
Strand: Reverse
Name: 51893989
Synonym: STH2851
Alternate gene names: NA
Gene position: 3073991-3073407 (Counterclockwise)
Preceding gene: 51893990
Following gene: 51893988
Centisome position: 86.2
GC content: 69.74
Gene sequence:
>585_bases GTGCGGGTACACTCTCCGGCGGGGGCTCGCTCCCGCATCGGAGGACGCGCCGTGCGGGAGGAGGGCCCGTATCGGAGGGA GGAATCGGCGTTGGCAGAGCAGTTCATTCTGGGCCTCGGCCTCGTGGAGGACGAGGACCGGCTGGTGATCGTGCGGAACC GTTGGGCCGTCGGCGAGGTCTGGTCGCTGCCCGGCGGCCGGCTGGAGGTGGGCGAGTCGCTCACCGACTGCGTGGTGCGG GAGGTGCAGGAGGAGACCGGCCTGCTGGTCGCCCCCGTGGAACTGGCGTACGTGCAGGACACGCACAACCTGGTCCATGA TCAGCACTTCCTGGTGCACGTGTTCTCCTGCCGGCTGGTGGCCGGGACGCTGCGGGTGCCGGAGCATGACGAGTACGTGG TGGACGTCCGGTGGGTCAAGCGCGACGAGGTCGCCCGCTACATCACCTGGCCCACCTACCGGGACCCGCTGCTGGCCTAT CTCGCCGGCCACGAGCGGCGCTATTGGTTGGACCGGGACGGGTACCGCCCGGAGCTGGGGAAGGGGCCGGACCGGAAGGG GAAGGAGGAAAACGGATGGCAGTGA
Upstream 100 bases:
>100_bases GGTGCGGATCCTCGACCGGGCGGAGGCTCCCCGCGGGTAACCCGGGTCTCCGTTTGGGCAGGCCCCCCGGGCGCCTGGTG CGGCAGGAGAACCCGGGCCC
Downstream 100 bases:
>100_bases AGCGCGCCCTGATCAGCGTCTACGACAAGCAGGGGATCGTGGAGTTCGCACGGGGGCTGGCCGACCTGGGGGTGGAGATC ATCTCCACGGGCGGTACGTA
Product: MutT-like protein
Products: NA
Alternate protein names: Mut-Like Protein; MutT-Like Protein; Hydrolase NUDIX Family
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEVWSLPGGRLEVGESLTDCVVR EVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLVAGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAY LAGHERRYWLDRDGYRPELGKGPDRKGKEENGWQ
Sequences:
>Translated_194_residues MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEVWSLPGGRLEVGESLTDCVVR EVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLVAGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAY LAGHERRYWLDRDGYRPELGKGPDRKGKEENGWQ >Mature_194_residues MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEVWSLPGGRLEVGESLTDCVVR EVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLVAGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAY LAGHERRYWLDRDGYRPELGKGPDRKGKEENGWQ
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22338; Mature: 22338
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEV CCCCCCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCE WSLPGGRLEVGESLTDCVVREVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLV ECCCCCCEECCHHHHHHHHHHHHHHCCEEEECEEEEEEHHHHHHHHCHHHHHHHHHHHHH AGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAYLAGHERRYWLDRDGYRPELG EEECCCCCCCCEEEEEEEECCHHHHEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCC KGPDRKGKEENGWQ CCCCCCCCCCCCCC >Mature Secondary Structure MRVHSPAGARSRIGGRAVREEGPYRREESALAEQFILGLGLVEDEDRLVIVRNRWAVGEV CCCCCCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCE WSLPGGRLEVGESLTDCVVREVQEETGLLVAPVELAYVQDTHNLVHDQHFLVHVFSCRLV ECCCCCCEECCHHHHHHHHHHHHHHCCEEEECEEEEEEHHHHHHHHCHHHHHHHHHHHHH AGTLRVPEHDEYVVDVRWVKRDEVARYITWPTYRDPLLAYLAGHERRYWLDRDGYRPELG EEECCCCCCCCEEEEEEEECCHHHHEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCC KGPDRKGKEENGWQ CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA