| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is hisC
Identifier: 51893969
GI number: 51893969
Start: 3052669
End: 3053754
Strand: Reverse
Name: hisC
Synonym: STH2831
Alternate gene names: 51893969
Gene position: 3053754-3052669 (Counterclockwise)
Preceding gene: 51893970
Following gene: 51893968
Centisome position: 85.63
GC content: 72.1
Gene sequence:
>1086_bases ATGTCCAGCGTGCGCACAGCGGTCCGGCGGATGAAGCCCTACGTGCCGGGCAAGCCGGTGGAGGACGTCCAGCGGGAGCT GGGGCTTCACGACCTCGTCAAGCTCAACCAGAACGAGAACCCCCTGGGCCCTTCGCCCCGGGCGGTGGCGGCCGCGCGCG CGGCGATGGCCCAGGTCCACACCTATCCCGAGGGAACCGCCCGCCGGCTCCGGGAGCGGCTGGCGCAGATGTGGAACCTG CCTGCGGACTGGTTCCTGATCGGCAACGGCTCCGACGAGGTCTTCCGGCTGCTGGCGGAGGTGTACCTGGAGCCGGGGGA CCGGGTGGTCGTCCCTGAGCCGTCGTTCGCCGCCTACCGGTTCGTGGCGGAGCTGATGGGCGCCGAGGTGGTGGCGGTGC CCCTGGCCGGCTGGACCATGGACCTGCCTGCGATGGCGGAGGCGGCGGCGCGGGGTGCGAAGCTGCTCTTCCTCTGCCGG CCCAACAACCCCACCGGCACGGTGTTCGCCGAGGCCGACCTGCGGGCGGCCCTGGAGCGGGTGCCGCCGTCGACCCTGGT GGTGGTGGATGAGGCCTACCGGGAGTTCGACGAGACCCCGTTCGACAGCCGGGCCCTGGTGCAGGACTACCCGAACGTGG TCATCGCCCGGACGTTCAGCAAGATCTACGGCATGGCGGGCTTCCGGCTGGGCTACGGCGTCATGCGGCCGGAGGTGCTG GCGCCGCTGTACACGGCCCGGGATCCCTTCAGCGTGAACGGCCTGGCGGTGGCGGCCGGGCTGGCGGCCCTGGACGACGT GGAACACGTGGAGCGGACCCGGGCGCTCACCCGGGAGGGAAAGGCGTACCTCTACGCCGCCTTCCAGCGGCTGGGGCTCG GGTACGTGCCCAGCGAGGCCAACTTCGTCCTGTTCGACGCGGGCAGGCCTGCGGCAGAGGTGTTCGACGCGCTGCTTCGG CGCGGGGTGCTGGTGCGTCCGTGCGGCTCCTTCGGCCTGCCGGACCACCTGCGGGTGACGGTGGGGACGCCGGAGCAGAA CCGACGGTTCGTGGAGGCGCTGAAGGCGGCGCTGGGCGAAGGGTGA
Upstream 100 bases:
>100_bases TGGTGGCCCTGGTGGACCAGGGGCTGAGCCCCGCGGACGTGGCGGACCAGCTGGCCAGCCGGCGGGGGAGGAGGCGGGAG CAGCAGAAGGAGGAGTAGCC
Downstream 100 bases:
>100_bases TGGGACCGGGCGGGGCCCCGGAGGGCGCTCCCGCCCTTTCGCATCAGGGGGATCGCCGAGGGGCCGGAAGGGGTCGCGCA TAGGCGCTGCAGGGAACCTG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSSVRTAVRRMKPYVPGKPVEDVQRELGLHDLVKLNQNENPLGPSPRAVAAARAAMAQVHTYPEGTARRLRERLAQMWNL PADWFLIGNGSDEVFRLLAEVYLEPGDRVVVPEPSFAAYRFVAELMGAEVVAVPLAGWTMDLPAMAEAAARGAKLLFLCR PNNPTGTVFAEADLRAALERVPPSTLVVVDEAYREFDETPFDSRALVQDYPNVVIARTFSKIYGMAGFRLGYGVMRPEVL APLYTARDPFSVNGLAVAAGLAALDDVEHVERTRALTREGKAYLYAAFQRLGLGYVPSEANFVLFDAGRPAAEVFDALLR RGVLVRPCGSFGLPDHLRVTVGTPEQNRRFVEALKAALGEG
Sequences:
>Translated_361_residues MSSVRTAVRRMKPYVPGKPVEDVQRELGLHDLVKLNQNENPLGPSPRAVAAARAAMAQVHTYPEGTARRLRERLAQMWNL PADWFLIGNGSDEVFRLLAEVYLEPGDRVVVPEPSFAAYRFVAELMGAEVVAVPLAGWTMDLPAMAEAAARGAKLLFLCR PNNPTGTVFAEADLRAALERVPPSTLVVVDEAYREFDETPFDSRALVQDYPNVVIARTFSKIYGMAGFRLGYGVMRPEVL APLYTARDPFSVNGLAVAAGLAALDDVEHVERTRALTREGKAYLYAAFQRLGLGYVPSEANFVLFDAGRPAAEVFDALLR RGVLVRPCGSFGLPDHLRVTVGTPEQNRRFVEALKAALGEG >Mature_360_residues SSVRTAVRRMKPYVPGKPVEDVQRELGLHDLVKLNQNENPLGPSPRAVAAARAAMAQVHTYPEGTARRLRERLAQMWNLP ADWFLIGNGSDEVFRLLAEVYLEPGDRVVVPEPSFAAYRFVAELMGAEVVAVPLAGWTMDLPAMAEAAARGAKLLFLCRP NNPTGTVFAEADLRAALERVPPSTLVVVDEAYREFDETPFDSRALVQDYPNVVIARTFSKIYGMAGFRLGYGVMRPEVLA PLYTARDPFSVNGLAVAAGLAALDDVEHVERTRALTREGKAYLYAAFQRLGLGYVPSEANFVLFDAGRPAAEVFDALLRR GVLVRPCGSFGLPDHLRVTVGTPEQNRRFVEALKAALGEG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=363, Percent_Identity=31.404958677686, Blast_Score=143, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6322075, Length=360, Percent_Identity=28.6111111111111, Blast_Score=120, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_SYMTH (Q67KI2)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076660.1 - ProteinModelPortal: Q67KI2 - SMR: Q67KI2 - GeneID: 2979869 - GenomeReviews: AP006840_GR - KEGG: sth:STH2831 - NMPDR: fig|292459.1.peg.2706 - HOGENOM: HBG646350 - OMA: TEANFIF - BioCyc: STHE292459:STH2831-MONOMER - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39539; Mature: 39408
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVRTAVRRMKPYVPGKPVEDVQRELGLHDLVKLNQNENPLGPSPRAVAAARAAMAQVH CCHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH TYPEGTARRLRERLAQMWNLPADWFLIGNGSDEVFRLLAEVYLEPGDRVVVPEPSFAAYR CCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHH FVAELMGAEVVAVPLAGWTMDLPAMAEAAARGAKLLFLCRPNNPTGTVFAEADLRAALER HHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEECHHHHHHHHH VPPSTLVVVDEAYREFDETPFDSRALVQDYPNVVIARTFSKIYGMAGFRLGYGVMRPEVL CCCCEEEEEEHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHH APLYTARDPFSVNGLAVAAGLAALDDVEHVERTRALTREGKAYLYAAFQRLGLGYVPSEA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC NFVLFDAGRPAAEVFDALLRRGVLVRPCGSFGLPDHLRVTVGTPEQNRRFVEALKAALGE CEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC G C >Mature Secondary Structure SSVRTAVRRMKPYVPGKPVEDVQRELGLHDLVKLNQNENPLGPSPRAVAAARAAMAQVH CHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH TYPEGTARRLRERLAQMWNLPADWFLIGNGSDEVFRLLAEVYLEPGDRVVVPEPSFAAYR CCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHH FVAELMGAEVVAVPLAGWTMDLPAMAEAAARGAKLLFLCRPNNPTGTVFAEADLRAALER HHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEECHHHHHHHHH VPPSTLVVVDEAYREFDETPFDSRALVQDYPNVVIARTFSKIYGMAGFRLGYGVMRPEVL CCCCEEEEEEHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHH APLYTARDPFSVNGLAVAAGLAALDDVEHVERTRALTREGKAYLYAAFQRLGLGYVPSEA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC NFVLFDAGRPAAEVFDALLRRGVLVRPCGSFGLPDHLRVTVGTPEQNRRFVEALKAALGE CEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA