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The map label for this gene is fdhD [H]

Identifier: 51893735

GI number: 51893735

Start: 2786512

End: 2787258

Strand: Reverse

Name: fdhD [H]

Synonym: STH2597

Alternate gene names: 51893735

Gene position: 2787258-2786512 (Counterclockwise)

Preceding gene: 51893736

Following gene: 51893733

Centisome position: 78.16

GC content: 69.21

Gene sequence:

>747_bases
ATGACCGACTTCGGAGAGCTGCCGCCCATGCCGGTGGAGCGGCCGGCCACGCTGTACATCAACGATCAGGAGATCGTGAC
CTTGCAGACGACGCCCAGCCATCTTGATGACTGGGCTGTCGGCTTTCTTTTTGGCGAGGGGATCATCCGGGACCTGGGAG
AGGTGGCCCGGCTCTCGGTGGACGAGGACCGGGGCATGGTCTGGGTCGACCTGCCGGGGCTGACCGAGCTGCCCGACGCC
TCCACCCGCAAGCGCTACCTCACCGCCGGCTGCGGCAAGGGGGTCACCTTCAGCTCGCTGAAGGACGCCCTCCTGCTGAA
AAAAGTGGACCACCCGCTGACGGTGCGGGTGGCCGACCTGCTGGACTGGGTGAAGGAGATGCAGCGCAACACGCCGCTCT
ATGCGGCGACAGGCGGCGTCCACGGCGCCGGGCTGAAGAACCTGGCGACCGGCGAGATGATCGTGCGGGAGGATATCGGC
CGCCACAACGCCCTGGACAAGGCCATCGGCGCCGCCCTGCGGGCGGGGTGGGACTTTACGCGGGTGGTGGCGGTGAGCTC
GGGCCGCATCAGCTACGAGGCCGCCACCAAGCTGGGCCGGGCGCAGATCGCCGTCGGCGCCACGCTGACGGCGGCCACCG
ACCAGGCGGTCAGGCTGGCCACGCACCTGGGCATGGACCTGGTAGGCTACGCCCGCAGCCCGAAGCACATGGTGCTGTAC
ACCCGCAGCGGCCGGCTGCTGCCGTAG

Upstream 100 bases:

>100_bases
GCCAGCGGGTCTGGCGCGAGCGCCCGGGTGAGATCCTGCGTTCGGCGCTGGCGGCCACCAAGGGGCTGCTGGCGGACGCG
AGCTGACGGAGGAGGAGACG

Downstream 100 bases:

>100_bases
CCGCTTCGACCGTGGCCCGGCGAGGTCTGTTGACGGCGCACCAGGGCGCTCATGACCCCGCGGATTCCGCGGGCTTGGCG
TACCTGAAGGCGGGCTGTGT

Product: formate dehydrogenase associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTDFGELPPMPVERPATLYINDQEIVTLQTTPSHLDDWAVGFLFGEGIIRDLGEVARLSVDEDRGMVWVDLPGLTELPDA
STRKRYLTAGCGKGVTFSSLKDALLLKKVDHPLTVRVADLLDWVKEMQRNTPLYAATGGVHGAGLKNLATGEMIVREDIG
RHNALDKAIGAALRAGWDFTRVVAVSSGRISYEAATKLGRAQIAVGATLTAATDQAVRLATHLGMDLVGYARSPKHMVLY
TRSGRLLP

Sequences:

>Translated_248_residues
MTDFGELPPMPVERPATLYINDQEIVTLQTTPSHLDDWAVGFLFGEGIIRDLGEVARLSVDEDRGMVWVDLPGLTELPDA
STRKRYLTAGCGKGVTFSSLKDALLLKKVDHPLTVRVADLLDWVKEMQRNTPLYAATGGVHGAGLKNLATGEMIVREDIG
RHNALDKAIGAALRAGWDFTRVVAVSSGRISYEAATKLGRAQIAVGATLTAATDQAVRLATHLGMDLVGYARSPKHMVLY
TRSGRLLP
>Mature_247_residues
TDFGELPPMPVERPATLYINDQEIVTLQTTPSHLDDWAVGFLFGEGIIRDLGEVARLSVDEDRGMVWVDLPGLTELPDAS
TRKRYLTAGCGKGVTFSSLKDALLLKKVDHPLTVRVADLLDWVKEMQRNTPLYAATGGVHGAGLKNLATGEMIVREDIGR
HNALDKAIGAALRAGWDFTRVVAVSSGRISYEAATKLGRAQIAVGATLTAATDQAVRLATHLGMDLVGYARSPKHMVLYT
RSGRLLP

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=247, Percent_Identity=29.1497975708502, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 26862; Mature: 26731

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFGELPPMPVERPATLYINDQEIVTLQTTPSHLDDWAVGFLFGEGIIRDLGEVARLSV
CCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DEDRGMVWVDLPGLTELPDASTRKRYLTAGCGKGVTFSSLKDALLLKKVDHPLTVRVADL
CCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHH
LDWVKEMQRNTPLYAATGGVHGAGLKNLATGEMIVREDIGRHNALDKAIGAALRAGWDFT
HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEE
RVVAVSSGRISYEAATKLGRAQIAVGATLTAATDQAVRLATHLGMDLVGYARSPKHMVLY
EEEEEECCCEEHHHHHHCCCEEEEECEEEECCCHHHHHHHHHHCCHHHHCCCCCCEEEEE
TRSGRLLP
ECCCCCCC
>Mature Secondary Structure 
TDFGELPPMPVERPATLYINDQEIVTLQTTPSHLDDWAVGFLFGEGIIRDLGEVARLSV
CCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DEDRGMVWVDLPGLTELPDASTRKRYLTAGCGKGVTFSSLKDALLLKKVDHPLTVRVADL
CCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHH
LDWVKEMQRNTPLYAATGGVHGAGLKNLATGEMIVREDIGRHNALDKAIGAALRAGWDFT
HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEE
RVVAVSSGRISYEAATKLGRAQIAVGATLTAATDQAVRLATHLGMDLVGYARSPKHMVLY
EEEEEECCCEEHHHHHHCCCEEEEECEEEECCCHHHHHHHHHHCCHHHHCCCCCCEEEEE
TRSGRLLP
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA