Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893727

Identifier: 51893727

GI number: 51893727

Start: 2775750

End: 2777243

Strand: Reverse

Name: 51893727

Synonym: STH2589

Alternate gene names: NA

Gene position: 2777243-2775750 (Counterclockwise)

Preceding gene: 51893728

Following gene: 51893726

Centisome position: 77.88

GC content: 70.48

Gene sequence:

>1494_bases
GTGGCCGCGGCCCTGGAGCGGTACAACCGCGCCCTGGGCGCGGACGAGGCCTCGCTGGAGAACGCCCGCCTGCTGGGCCG
GCCGGAAACCCTGGCCGCGGTGACCGGCCAGCAGGCCGGGATCCTCACCGGGCCGGCCTACTCCATCTACAAGGCCATGA
CCACCATCCGGCTGGCCAGGCAGCAGAGCCAGCGGCTGGGGGTGCCGGTGGTCCCGGTGTTCTGGATCGCCGGCGAGGAC
CACGACTGGCACGAGGTGAGTTGGGTGATGGTGCCGGCGGGGAACGAGACCCGCCGGCTCGCCCTGAGCGAACGGTTCGA
CGGGGAGCGGCGCTCGGTCGCCCTCGCGCCCATGCCCGCCTCGGTGAGCGACCTGATCGACGAGTTTGCCCAGCTCATGC
CGGATACCGAGTTCAAGGAGGAGGTCATCGCGCACCTGCGGGAGGCGGCGGTCGGCGGGCCGGCGCTGGATCCGGAGGCC
ACCGGGGGCGCACCGTCGCTGGCCGACTGGTTCGGCCGGCTGATGGCCTGGGTCTTCCGGGGCACCGGCCTGGTCTTCCT
CAACTCGTCCGACCCGGCGCTGCGGCGCATTGAGGCGCCCTTCTTCGCCCGTGCGCTGCAGCAGCAGGCGGAGGTGGAGG
CGGCCTGTGCCGCTGGCGTCGACCGCTGGGAGCGGGAGCTGGGGTTTGCGTGTACCGTTGAGCAGACGCCGAACAGCCTG
AATCTCTTCATTTATATTGACGGCGAGCGGCTGCCCCTGCTGGGGGAGGGGGACCGGGTCTGGGTGCGGGGCCGCCCCGA
CCTCTCCTGGAGCCGGTCCGAGCTGGTGGATCTGGCCCTGCGGAGCCCCGAGCGCTTCTCCACCAACGTGGTGCTGCGGC
CCGTGGTGCAGTCGTACCTGCTGCCCGACCTGTTCTACGTCGGCGGGCCGGGCGAGATCTCCTACTTCGGGCTGCTGCGC
GATGTCTACCGGGCGATGGGCCGGCAGATGCCCGTCGTCGTGCCCCGGGAGGGCTTTACCCTGGTGGAGCCGCCCATCGC
GCGCATCCTGCAGAAGCACGAGCTCACCCTGGACGACGCCTTCCACCGGCTGGACGACCTCCGCCAGGAGCTGCTGGAGC
GGGAGGACCGCCTGGGGATCGCACAGGCCTTCGCGTCCTTCCGGCAGGACTTCGAGCGCCGCCACGCCGAGCTGGCTGCC
CTGGTGCTGCAGCTGGATCCGGGGCTCGGCCAGGTGGTGGAGGAGAACCGGCGGCAGATCGAGCACCAGATCAACCGGCT
GGAGGAGAAGGCGAAGCAGCAGCACCGGAAGAACTGTGAGACGGCGCTGAGGCAGTTCGACCGGTTGAAGGCCAACCTGA
CACCCAACGGGCTGCAGGAGCGCGCCTTCAGCATCCTGCCGTACCTGGTGAAGTACGGGCCTGACCTGGTTCGCCGCCTG
GTGGACGAGGTGCCGCTGGAGGAAGGCTGGTCGCACCGGGCCATCTACCTCTAG

Upstream 100 bases:

>100_bases
CGTGGCTCCTGCGTATGAGTACGACTGGCGCCGGCAGGAGAGCTTCGAACGGCGGGCCGCCTACCTCACCGGCGGCGGGT
ACGCCGGCGACCGGGCCGCG

Downstream 100 bases:

>100_bases
GCGCCCGGAACCCGATCGGCGCGGCCCGGGACGGCTTCGCGATGCGGACCGTTCATCGGGAGCGGACGGCGCCGTCCGCT
CCCCTTTTCCGCGACCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MAAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLARQQSQRLGVPVVPVFWIAGED
HDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPASVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEA
TGGAPSLADWFGRLMAWVFRGTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL
NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYLLPDLFYVGGPGEISYFGLLR
DVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDAFHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAA
LVLQLDPGLGQVVEENRRQIEHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL
VDEVPLEEGWSHRAIYL

Sequences:

>Translated_497_residues
MAAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLARQQSQRLGVPVVPVFWIAGED
HDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPASVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEA
TGGAPSLADWFGRLMAWVFRGTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL
NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYLLPDLFYVGGPGEISYFGLLR
DVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDAFHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAA
LVLQLDPGLGQVVEENRRQIEHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL
VDEVPLEEGWSHRAIYL
>Mature_496_residues
AAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLARQQSQRLGVPVVPVFWIAGEDH
DWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPASVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEAT
GGAPSLADWFGRLMAWVFRGTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSLN
LFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYLLPDLFYVGGPGEISYFGLLRD
VYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDAFHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAAL
VLQLDPGLGQVVEENRRQIEHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRLV
DEVPLEEGWSHRAIYL

Specific function: Unknown

COG id: COG4365

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0747 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011199 [H]

Pfam domain/function: PF10079 DUF2317 [H]

EC number: NA

Molecular weight: Translated: 56019; Mature: 55887

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLAR
CCHHHHHHHHHHCCCCHHCCCCHHCCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH
QQSQRLGVPVVPVFWIAGEDHDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPA
HHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCC
SVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEATGGAPSLADWFGRLMAWVFR
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL
CCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCE
NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYL
EEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHH
LPDLFYVGGPGEISYFGLLRDVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDA
HHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCHHHHHHHHHCCCHHHH
FHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAALVLQLDPGLGQVVEENRRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VDEVPLEEGWSHRAIYL
HHHCCCCCCCCCCEECC
>Mature Secondary Structure 
AAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLAR
CHHHHHHHHHHCCCCHHCCCCHHCCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH
QQSQRLGVPVVPVFWIAGEDHDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPA
HHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCC
SVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEATGGAPSLADWFGRLMAWVFR
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL
CCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCE
NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYL
EEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHH
LPDLFYVGGPGEISYFGLLRDVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDA
HHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCHHHHHHHHHCCCHHHH
FHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAALVLQLDPGLGQVVEENRRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VDEVPLEEGWSHRAIYL
HHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA