| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893727
Identifier: 51893727
GI number: 51893727
Start: 2775750
End: 2777243
Strand: Reverse
Name: 51893727
Synonym: STH2589
Alternate gene names: NA
Gene position: 2777243-2775750 (Counterclockwise)
Preceding gene: 51893728
Following gene: 51893726
Centisome position: 77.88
GC content: 70.48
Gene sequence:
>1494_bases GTGGCCGCGGCCCTGGAGCGGTACAACCGCGCCCTGGGCGCGGACGAGGCCTCGCTGGAGAACGCCCGCCTGCTGGGCCG GCCGGAAACCCTGGCCGCGGTGACCGGCCAGCAGGCCGGGATCCTCACCGGGCCGGCCTACTCCATCTACAAGGCCATGA CCACCATCCGGCTGGCCAGGCAGCAGAGCCAGCGGCTGGGGGTGCCGGTGGTCCCGGTGTTCTGGATCGCCGGCGAGGAC CACGACTGGCACGAGGTGAGTTGGGTGATGGTGCCGGCGGGGAACGAGACCCGCCGGCTCGCCCTGAGCGAACGGTTCGA CGGGGAGCGGCGCTCGGTCGCCCTCGCGCCCATGCCCGCCTCGGTGAGCGACCTGATCGACGAGTTTGCCCAGCTCATGC CGGATACCGAGTTCAAGGAGGAGGTCATCGCGCACCTGCGGGAGGCGGCGGTCGGCGGGCCGGCGCTGGATCCGGAGGCC ACCGGGGGCGCACCGTCGCTGGCCGACTGGTTCGGCCGGCTGATGGCCTGGGTCTTCCGGGGCACCGGCCTGGTCTTCCT CAACTCGTCCGACCCGGCGCTGCGGCGCATTGAGGCGCCCTTCTTCGCCCGTGCGCTGCAGCAGCAGGCGGAGGTGGAGG CGGCCTGTGCCGCTGGCGTCGACCGCTGGGAGCGGGAGCTGGGGTTTGCGTGTACCGTTGAGCAGACGCCGAACAGCCTG AATCTCTTCATTTATATTGACGGCGAGCGGCTGCCCCTGCTGGGGGAGGGGGACCGGGTCTGGGTGCGGGGCCGCCCCGA CCTCTCCTGGAGCCGGTCCGAGCTGGTGGATCTGGCCCTGCGGAGCCCCGAGCGCTTCTCCACCAACGTGGTGCTGCGGC CCGTGGTGCAGTCGTACCTGCTGCCCGACCTGTTCTACGTCGGCGGGCCGGGCGAGATCTCCTACTTCGGGCTGCTGCGC GATGTCTACCGGGCGATGGGCCGGCAGATGCCCGTCGTCGTGCCCCGGGAGGGCTTTACCCTGGTGGAGCCGCCCATCGC GCGCATCCTGCAGAAGCACGAGCTCACCCTGGACGACGCCTTCCACCGGCTGGACGACCTCCGCCAGGAGCTGCTGGAGC GGGAGGACCGCCTGGGGATCGCACAGGCCTTCGCGTCCTTCCGGCAGGACTTCGAGCGCCGCCACGCCGAGCTGGCTGCC CTGGTGCTGCAGCTGGATCCGGGGCTCGGCCAGGTGGTGGAGGAGAACCGGCGGCAGATCGAGCACCAGATCAACCGGCT GGAGGAGAAGGCGAAGCAGCAGCACCGGAAGAACTGTGAGACGGCGCTGAGGCAGTTCGACCGGTTGAAGGCCAACCTGA CACCCAACGGGCTGCAGGAGCGCGCCTTCAGCATCCTGCCGTACCTGGTGAAGTACGGGCCTGACCTGGTTCGCCGCCTG GTGGACGAGGTGCCGCTGGAGGAAGGCTGGTCGCACCGGGCCATCTACCTCTAG
Upstream 100 bases:
>100_bases CGTGGCTCCTGCGTATGAGTACGACTGGCGCCGGCAGGAGAGCTTCGAACGGCGGGCCGCCTACCTCACCGGCGGCGGGT ACGCCGGCGACCGGGCCGCG
Downstream 100 bases:
>100_bases GCGCCCGGAACCCGATCGGCGCGGCCCGGGACGGCTTCGCGATGCGGACCGTTCATCGGGAGCGGACGGCGCCGTCCGCT CCCCTTTTCCGCGACCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MAAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLARQQSQRLGVPVVPVFWIAGED HDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPASVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEA TGGAPSLADWFGRLMAWVFRGTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYLLPDLFYVGGPGEISYFGLLR DVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDAFHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAA LVLQLDPGLGQVVEENRRQIEHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL VDEVPLEEGWSHRAIYL
Sequences:
>Translated_497_residues MAAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLARQQSQRLGVPVVPVFWIAGED HDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPASVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEA TGGAPSLADWFGRLMAWVFRGTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYLLPDLFYVGGPGEISYFGLLR DVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDAFHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAA LVLQLDPGLGQVVEENRRQIEHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL VDEVPLEEGWSHRAIYL >Mature_496_residues AAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLARQQSQRLGVPVVPVFWIAGEDH DWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPASVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEAT GGAPSLADWFGRLMAWVFRGTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSLN LFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYLLPDLFYVGGPGEISYFGLLRD VYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDAFHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAAL VLQLDPGLGQVVEENRRQIEHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRLV DEVPLEEGWSHRAIYL
Specific function: Unknown
COG id: COG4365
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0747 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011199 [H]
Pfam domain/function: PF10079 DUF2317 [H]
EC number: NA
Molecular weight: Translated: 56019; Mature: 55887
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLAR CCHHHHHHHHHHCCCCHHCCCCHHCCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH QQSQRLGVPVVPVFWIAGEDHDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPA HHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCC SVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEATGGAPSLADWFGRLMAWVFR CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC GTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL CCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCE NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYL EEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHH LPDLFYVGGPGEISYFGLLRDVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDA HHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCHHHHHHHHHCCCHHHH FHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAALVLQLDPGLGQVVEENRRQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH VDEVPLEEGWSHRAIYL HHHCCCCCCCCCCEECC >Mature Secondary Structure AAALERYNRALGADEASLENARLLGRPETLAAVTGQQAGILTGPAYSIYKAMTTIRLAR CHHHHHHHHHHCCCCHHCCCCHHCCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHH QQSQRLGVPVVPVFWIAGEDHDWHEVSWVMVPAGNETRRLALSERFDGERRSVALAPMPA HHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCC SVSDLIDEFAQLMPDTEFKEEVIAHLREAAVGGPALDPEATGGAPSLADWFGRLMAWVFR CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC GTGLVFLNSSDPALRRIEAPFFARALQQQAEVEAACAAGVDRWERELGFACTVEQTPNSL CCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCE NLFIYIDGERLPLLGEGDRVWVRGRPDLSWSRSELVDLALRSPERFSTNVVLRPVVQSYL EEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHH LPDLFYVGGPGEISYFGLLRDVYRAMGRQMPVVVPREGFTLVEPPIARILQKHELTLDDA HHHHEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCHHHHHHHHHCCCHHHH FHRLDDLRQELLEREDRLGIAQAFASFRQDFERRHAELAALVLQLDPGLGQVVEENRRQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EHQINRLEEKAKQQHRKNCETALRQFDRLKANLTPNGLQERAFSILPYLVKYGPDLVRRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH VDEVPLEEGWSHRAIYL HHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA