| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893726
Identifier: 51893726
GI number: 51893726
Start: 2774754
End: 2775452
Strand: Reverse
Name: 51893726
Synonym: STH2588
Alternate gene names: NA
Gene position: 2775452-2774754 (Counterclockwise)
Preceding gene: 51893727
Following gene: 51893725
Centisome position: 77.83
GC content: 73.53
Gene sequence:
>699_bases GTGAACGACAAGATCGCGATCATCGGCGCCGGACCGCTGGCGTCGATTCTGGCGCATCGCATTCCCACCTCCGTCCGCAA GGTGATCATCGGGCGCCCGAAGGCCGCCGCGGTGGCCCTGGCCGATGAGGTCGGCGGCATCGCCTCCGACCAGGCCAGCG CCGTGCGGGGATGCCGCGTGGTGTTCCTGGCCGTGCCCACCCCAGACGTGGCGCAGGCGCTCGCGGACATCCGGCCGCAT CTTTCGCCGGAGGCCCTGGTGGTCAACACGGCCGTCGATGTGCCGACGGCGGACCTCGCGGACGATCGGCTGCACGTGGG CGCTGCCAAGATCATCGGTCACCCCCAGGAGCTGGAGCAGGGCGCCCGGGCCGTGGTCGTTCTGGACCATGTCGGGCCCG CCGATGCGGAGCTGTTGACCGCCCTGCTGGCCGACCTGGGTCCGGTGATCCGGGGCGACGAGCGGACCGTGGAGGCCGCG GCCCGGGCCCTGTCCGAGGTGCTGGCCGGGGCCCGCGACGAACTCCGCCGTCGCCTGGCGGAAGCCGGGCTGCCGGCCGA CGTGGTGCCCGCGGCGATCGCCGCGGCGGCGCCCGGCGTGCTCAGGGCGATGGCGCTGAGTGAGGACAATGCGGCGGAGA GGGGGATCAGGCGGCACGCAGGGGCCGGCGAGACTGCTGCTTCGCGAGTCTCGCACTAG
Upstream 100 bases:
>100_bases TTCTCACCCGACCGCGGTCTCGTTCGTCGCTGCGGTTTCCTCCGGGAATGGATGGGCAGACTTTCATTGTCCGGTACGCA TTCTGCGAGGAGGCAGCGCG
Downstream 100 bases:
>100_bases GAGGGTGCCCATTGTTGAATCGCAAGGGACTTCGCCCCGCTTGGGCCATTGCACTGGTGGCCCTGGTGGCCGTGCTGCTC ACCGGAACGCTCACCGCACC
Product: putative pyrroline-5-carboxylate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MNDKIAIIGAGPLASILAHRIPTSVRKVIIGRPKAAAVALADEVGGIASDQASAVRGCRVVFLAVPTPDVAQALADIRPH LSPEALVVNTAVDVPTADLADDRLHVGAAKIIGHPQELEQGARAVVVLDHVGPADAELLTALLADLGPVIRGDERTVEAA ARALSEVLAGARDELRRRLAEAGLPADVVPAAIAAAAPGVLRAMALSEDNAAERGIRRHAGAGETAASRVSH
Sequences:
>Translated_232_residues MNDKIAIIGAGPLASILAHRIPTSVRKVIIGRPKAAAVALADEVGGIASDQASAVRGCRVVFLAVPTPDVAQALADIRPH LSPEALVVNTAVDVPTADLADDRLHVGAAKIIGHPQELEQGARAVVVLDHVGPADAELLTALLADLGPVIRGDERTVEAA ARALSEVLAGARDELRRRLAEAGLPADVVPAAIAAAAPGVLRAMALSEDNAAERGIRRHAGAGETAASRVSH >Mature_232_residues MNDKIAIIGAGPLASILAHRIPTSVRKVIIGRPKAAAVALADEVGGIASDQASAVRGCRVVFLAVPTPDVAQALADIRPH LSPEALVVNTAVDVPTADLADDRLHVGAAKIIGHPQELEQGARAVVVLDHVGPADAELLTALLADLGPVIRGDERTVEAA ARALSEVLAGARDELRRRLAEAGLPADVVPAAIAAAAPGVLRAMALSEDNAAERGIRRHAGAGETAASRVSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23670; Mature: 23670
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKIAIIGAGPLASILAHRIPTSVRKVIIGRPKAAAVALADEVGGIASDQASAVRGCRV CCCCEEEEECCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCEE VFLAVPTPDVAQALADIRPHLSPEALVVNTAVDVPTADLADDRLHVGAAKIIGHPQELEQ EEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHC GARAVVVLDHVGPADAELLTALLADLGPVIRGDERTVEAAARALSEVLAGARDELRRRLA CCCEEEEEECCCCCHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH EAGLPADVVPAAIAAAAPGVLRAMALSEDNAAERGIRRHAGAGETAASRVSH HCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MNDKIAIIGAGPLASILAHRIPTSVRKVIIGRPKAAAVALADEVGGIASDQASAVRGCRV CCCCEEEEECCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCEE VFLAVPTPDVAQALADIRPHLSPEALVVNTAVDVPTADLADDRLHVGAAKIIGHPQELEQ EEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHC GARAVVVLDHVGPADAELLTALLADLGPVIRGDERTVEAAARALSEVLAGARDELRRRLA CCCEEEEEECCCCCHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH EAGLPADVVPAAIAAAAPGVLRAMALSEDNAAERGIRRHAGAGETAASRVSH HCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA