| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is proB
Identifier: 51893678
GI number: 51893678
Start: 2724430
End: 2725218
Strand: Reverse
Name: proB
Synonym: STH2540
Alternate gene names: 51893678
Gene position: 2725218-2724430 (Counterclockwise)
Preceding gene: 51893679
Following gene: 51893677
Centisome position: 76.42
GC content: 70.34
Gene sequence:
>789_bases TTGCGTGAACGGCTGAGGCACTGCAAGCGGGTAATTATCAAGGTAGGGACATCGACGCTGACCCATCCCGGCGGCCATCT GCACCTGGGCCGCATGGAGGCGCTGGTGCGCCAGATCGCCGACCTGCACTTCGAGGGGCGGCAGGTGATCCTCGTGACCT CGGGGGCGGTGGGTGCGGGGCTGGGCCGGCTGGGCCTTGCCGAGCGGCCCGCGGAGGTGGCGGCGAAACAGGCCCTCGCG GCGGTGGGACAGGGGCTCCTGATGCAGCGGTACGAGGGGCTCTTCAGCGAGTACGGCCTGGTGGTCGGCCAGGTGCTGCT CACCCGGGAGGACCTGGAGGATCCGGACCGTCGCGCCTCCTCCGCCCAGGTGATGGAGCGGCTCCTCGCCTGGGGGGTGA TCCCCATCGTCAACGAGAACGACACCGTGACCAGCGAGGAGATCCGGGTGGGCGACAACGACACGCTGTCCGCGCGGGTG GCTGCGCTGGTCCGTGCGGATCTGCTGATCCTGCTCTCCGATGTGGACGGGCTGTACCCGGCGGATCCCCATCTGCACCC GGGGCTTTCGCCGATCCCGTGGGTCTCGCCGGACGACGACCTGGACCGTTTCGCCGGCGGGCCCGGCAGCGCCAACGGCA CGGGGGGCATGGTGACCAAGGTCGCGGCCGCCCGCATCTGCGCCGAACACGGGATCCCGATGGTGCTGGCCTGCGGCGAG CGGCCCGACGTCCTCAGGCAGATCCTGGCCGGTGAGGAGATCGGCACACTCTTCAGTCGGGAGGGGTAG
Upstream 100 bases:
>100_bases CGAGGCAGCCGCCGCTCAGGCTGGTGGTACCACGGGAGAACACCCCGTCCGGCATGGACGGGGTTATTCTTTTTGGACGA CCCGTAGGGAGGCGGCGGGT
Downstream 100 bases:
>100_bases ACGGTGGATGTGCGGAGCATGGCCCGGCAGGCCCGGGCGGCCCAGCGGCAACTGGAGCTGACGTCGCCGGAGGAGCGCAA CGCGGCCCTGGAGGCGATCG
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MRERLRHCKRVIIKVGTSTLTHPGGHLHLGRMEALVRQIADLHFEGRQVILVTSGAVGAGLGRLGLAERPAEVAAKQALA AVGQGLLMQRYEGLFSEYGLVVGQVLLTREDLEDPDRRASSAQVMERLLAWGVIPIVNENDTVTSEEIRVGDNDTLSARV AALVRADLLILLSDVDGLYPADPHLHPGLSPIPWVSPDDDLDRFAGGPGSANGTGGMVTKVAAARICAEHGIPMVLACGE RPDVLRQILAGEEIGTLFSREG
Sequences:
>Translated_262_residues MRERLRHCKRVIIKVGTSTLTHPGGHLHLGRMEALVRQIADLHFEGRQVILVTSGAVGAGLGRLGLAERPAEVAAKQALA AVGQGLLMQRYEGLFSEYGLVVGQVLLTREDLEDPDRRASSAQVMERLLAWGVIPIVNENDTVTSEEIRVGDNDTLSARV AALVRADLLILLSDVDGLYPADPHLHPGLSPIPWVSPDDDLDRFAGGPGSANGTGGMVTKVAAARICAEHGIPMVLACGE RPDVLRQILAGEEIGTLFSREG >Mature_262_residues MRERLRHCKRVIIKVGTSTLTHPGGHLHLGRMEALVRQIADLHFEGRQVILVTSGAVGAGLGRLGLAERPAEVAAKQALA AVGQGLLMQRYEGLFSEYGLVVGQVLLTREDLEDPDRRASSAQVMERLLAWGVIPIVNENDTVTSEEIRVGDNDTLSARV AALVRADLLILLSDVDGLYPADPHLHPGLSPIPWVSPDDDLDRFAGGPGSANGTGGMVTKVAAARICAEHGIPMVLACGE RPDVLRQILAGEEIGTLFSREG
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate 5-kinase family
Homologues:
Organism=Homo sapiens, GI62912457, Length=291, Percent_Identity=34.7079037800687, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI21361368, Length=293, Percent_Identity=34.4709897610922, Blast_Score=144, Evalue=7e-35, Organism=Escherichia coli, GI1786437, Length=255, Percent_Identity=45.4901960784314, Blast_Score=204, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17569969, Length=273, Percent_Identity=36.996336996337, Blast_Score=163, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17569967, Length=273, Percent_Identity=36.996336996337, Blast_Score=163, Evalue=9e-41, Organism=Saccharomyces cerevisiae, GI6321822, Length=243, Percent_Identity=41.5637860082305, Blast_Score=174, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6320506, Length=239, Percent_Identity=41.0041841004184, Blast_Score=168, Evalue=8e-43, Organism=Drosophila melanogaster, GI21357643, Length=290, Percent_Identity=34.1379310344828, Blast_Score=164, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_SYMTH (Q67LC1)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076369.1 - ProteinModelPortal: Q67LC1 - SMR: Q67LC1 - GeneID: 2979426 - GenomeReviews: AP006840_GR - KEGG: sth:STH2540 - NMPDR: fig|292459.1.peg.2430 - HOGENOM: HBG507643 - OMA: LINTIDP - ProtClustDB: PRK12314 - BioCyc: STHE292459:STH2540-MONOMER - BRENDA: 2.7.2.11 - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.11
Molecular weight: Translated: 28007; Mature: 28007
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERLRHCKRVIIKVGTSTLTHPGGHLHLGRMEALVRQIADLHFEGRQVILVTSGAVGAG CHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEECCCHHCC LGRLGLAERPAEVAAKQALAAVGQGLLMQRYEGLFSEYGLVVGQVLLTREDLEDPDRRAS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SAQVMERLLAWGVIPIVNENDTVTSEEIRVGDNDTLSARVAALVRADLLILLSDVDGLYP HHHHHHHHHHHCCCEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC ADPHLHPGLSPIPWVSPDDDLDRFAGGPGSANGTGGMVTKVAAARICAEHGIPMVLACGE CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC RPDVLRQILAGEEIGTLFSREG CHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure MRERLRHCKRVIIKVGTSTLTHPGGHLHLGRMEALVRQIADLHFEGRQVILVTSGAVGAG CHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEECCCHHCC LGRLGLAERPAEVAAKQALAAVGQGLLMQRYEGLFSEYGLVVGQVLLTREDLEDPDRRAS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SAQVMERLLAWGVIPIVNENDTVTSEEIRVGDNDTLSARVAALVRADLLILLSDVDGLYP HHHHHHHHHHHCCCEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC ADPHLHPGLSPIPWVSPDDDLDRFAGGPGSANGTGGMVTKVAAARICAEHGIPMVLACGE CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC RPDVLRQILAGEEIGTLFSREG CHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA