| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893662
Identifier: 51893662
GI number: 51893662
Start: 2709814
End: 2710914
Strand: Reverse
Name: 51893662
Synonym: STH2524
Alternate gene names: NA
Gene position: 2710914-2709814 (Counterclockwise)
Preceding gene: 51893663
Following gene: 51893661
Centisome position: 76.02
GC content: 73.39
Gene sequence:
>1101_bases GTGGGGATGATGGCAGGCCAACCGATCCCGTTTCTGCGGCCGGCCTTGCATGCGCTGGTGCGCGGGCCGTGGCGGACGCT CTGGATCGTCTCCCCCAGCCTGCATCTGGCGGCCCTGCAGGGGCTGCTGCCTGAGCTGGAGCGGGCCGGGGCGGAGATCC GGGTGCTGACCGACCTGTCGTACCAGGCGATCGGCGACGGCCGGGTCGAGTTGGCGGCCCTGCAGCGGCTGCGTCGCCTG GAGGGCTGCGAGGTGCGGTGGCAGCCCGACCTCGGCGCGTGCATCTACGCGTCCGACGAGGGCGGCGCCCTGGTGGGCAG CGGCCCCCTGACCCTGGATGGCCTGGACGGCCCCCGCCAGTACGGTGTACATCTTGCAGAGGCGGGCCCGGTGCTGTCCG ACCTGGAGCAGTGGTGGGAGTCGGCGCGCCGGCTCTCGCCGCAGGAGTGGGCGGCGTTGGAGGAGCGGGTGGGGCTTCGG CGGAACGCGCTGCGCATCGGAGCGGAGATCACCCGGCTCGGCGCGTTCGTGCGGGTGAGCGCCCACGGCACCCGGCGCAC CCGCAGGCTGGACCCCCGGGACTTCGGGGTGCTGGCCCTGGGCAACGTCCGCCTCCGCCCGATGGACGTCACGCTCTGCC GGCTGGACCTGGTGAGCCGGGCCAAGGACGAGCTGGACGCGATCCTGGCCGAACGGGGGCTGGAGTGGAACGGCCAGTAT CTGGTGCCCCGCCACTTCCTGGAGCAGGAGTGGCCGGGGATCTTCGCGGCCCGGGAGAAGCAGCTGGCGGAGGACCTGCG CTCGCCGGAGCAGCAGGCGGCGGTCGCCGCACAGCTGGCGCAGGCGCGGAGCGCCATCGCCGGGTTCCTGGGGGATCTCT ACCCCTTTGTGGACGCCGACGGCCGGCCCGCGGACCAGTGGGTCGCGGAGCAGCTGGAACGGCTGGTGCCGGAGGGACTG GCCGCTGCCGTCTGTGCGGAGGCGGGGGTGGAGTACCGGGTGCTGACCATCCTTCCCGAGGACGCCCGCTCCATCGCCGA GATGGACGAGTTGCTCCGGGACCCGCGCCTCCGGTCGGTCCAGCTGACGCTGCCCATCTGA
Upstream 100 bases:
>100_bases GCGCCCTGGCGGAGAAGAACATGCGCACCCTGGTGGACGGCGCAGGCGGAGCCGGGCTCGGCGCCGCCTCGGGCGTGGCC GGGGCCTGACGTCGGGAGGG
Downstream 100 bases:
>100_bases CCCGGCGGGTGCGACCGCGGGACCGGACAACCGGCGCCCGCGGATCGGGCACATCCCACCCCAGCGACAGCCACCCTGCG GCTTCGGCCGCAGGGTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGMMAGQPIPFLRPALHALVRGPWRTLWIVSPSLHLAALQGLLPELERAGAEIRVLTDLSYQAIGDGRVELAALQRLRRL EGCEVRWQPDLGACIYASDEGGALVGSGPLTLDGLDGPRQYGVHLAEAGPVLSDLEQWWESARRLSPQEWAALEERVGLR RNALRIGAEITRLGAFVRVSAHGTRRTRRLDPRDFGVLALGNVRLRPMDVTLCRLDLVSRAKDELDAILAERGLEWNGQY LVPRHFLEQEWPGIFAAREKQLAEDLRSPEQQAAVAAQLAQARSAIAGFLGDLYPFVDADGRPADQWVAEQLERLVPEGL AAAVCAEAGVEYRVLTILPEDARSIAEMDELLRDPRLRSVQLTLPI
Sequences:
>Translated_366_residues MGMMAGQPIPFLRPALHALVRGPWRTLWIVSPSLHLAALQGLLPELERAGAEIRVLTDLSYQAIGDGRVELAALQRLRRL EGCEVRWQPDLGACIYASDEGGALVGSGPLTLDGLDGPRQYGVHLAEAGPVLSDLEQWWESARRLSPQEWAALEERVGLR RNALRIGAEITRLGAFVRVSAHGTRRTRRLDPRDFGVLALGNVRLRPMDVTLCRLDLVSRAKDELDAILAERGLEWNGQY LVPRHFLEQEWPGIFAAREKQLAEDLRSPEQQAAVAAQLAQARSAIAGFLGDLYPFVDADGRPADQWVAEQLERLVPEGL AAAVCAEAGVEYRVLTILPEDARSIAEMDELLRDPRLRSVQLTLPI >Mature_365_residues GMMAGQPIPFLRPALHALVRGPWRTLWIVSPSLHLAALQGLLPELERAGAEIRVLTDLSYQAIGDGRVELAALQRLRRLE GCEVRWQPDLGACIYASDEGGALVGSGPLTLDGLDGPRQYGVHLAEAGPVLSDLEQWWESARRLSPQEWAALEERVGLRR NALRIGAEITRLGAFVRVSAHGTRRTRRLDPRDFGVLALGNVRLRPMDVTLCRLDLVSRAKDELDAILAERGLEWNGQYL VPRHFLEQEWPGIFAAREKQLAEDLRSPEQQAAVAAQLAQARSAIAGFLGDLYPFVDADGRPADQWVAEQLERLVPEGLA AAVCAEAGVEYRVLTILPEDARSIAEMDELLRDPRLRSVQLTLPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40463; Mature: 40332
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMMAGQPIPFLRPALHALVRGPWRTLWIVSPSLHLAALQGLLPELERAGAEIRVLTDLS CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCC YQAIGDGRVELAALQRLRRLEGCEVRWQPDLGACIYASDEGGALVGSGPLTLDGLDGPRQ HHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCEEEECCCEEECCCCCCHH YGVHLAEAGPVLSDLEQWWESARRLSPQEWAALEERVGLRRNALRIGAEITRLGAFVRVS HCEEHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEE AHGTRRTRRLDPRDFGVLALGNVRLRPMDVTLCRLDLVSRAKDELDAILAERGLEWNGQY CCCCCHHCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVPRHFLEQEWPGIFAAREKQLAEDLRSPEQQAAVAAQLAQARSAIAGFLGDLYPFVDAD ECHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRPADQWVAEQLERLVPEGLAAAVCAEAGVEYRVLTILPEDARSIAEMDELLRDPRLRSV CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEE QLTLPI EEEECC >Mature Secondary Structure GMMAGQPIPFLRPALHALVRGPWRTLWIVSPSLHLAALQGLLPELERAGAEIRVLTDLS CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCC YQAIGDGRVELAALQRLRRLEGCEVRWQPDLGACIYASDEGGALVGSGPLTLDGLDGPRQ HHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCEEEECCCEEECCCCCCHH YGVHLAEAGPVLSDLEQWWESARRLSPQEWAALEERVGLRRNALRIGAEITRLGAFVRVS HCEEHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEE AHGTRRTRRLDPRDFGVLALGNVRLRPMDVTLCRLDLVSRAKDELDAILAERGLEWNGQY CCCCCHHCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVPRHFLEQEWPGIFAAREKQLAEDLRSPEQQAAVAAQLAQARSAIAGFLGDLYPFVDAD ECHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRPADQWVAEQLERLVPEGLAAAVCAEAGVEYRVLTILPEDARSIAEMDELLRDPRLRSV CCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEE QLTLPI EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA