| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893661
Identifier: 51893661
GI number: 51893661
Start: 2708685
End: 2709065
Strand: Reverse
Name: 51893661
Synonym: STH2523
Alternate gene names: NA
Gene position: 2709065-2708685 (Counterclockwise)
Preceding gene: 51893662
Following gene: 51893660
Centisome position: 75.97
GC content: 62.99
Gene sequence:
>381_bases ATGTCCGATCCGTTCTTCGGCGGCGGGGCCTTTCGGCTGTTCGACATCATGTTCGTACTGGTGCCGATCCTCGTCATCGG CGGCTTTGTGTTCGTCTTTGGGTCCATGATCTACACGGCGGTGAGCAACATCCAGAAGCCCCTCCTCACCCGGCGGGCGC GCGTCGTGGCGAAGCGCGTGCGCCATTCGACACACCACCATCACCACGGCGACCATCACCACCACTCGCACCACACCGCC TATTACGTTACTTTCGAGTTCGAGGACGGCCGCCGGGAGGAGTTCTCGGTGCGGGGCGACCAGTACGGGCTCCTCGTCGA GGGCGACGAGGGCACGCTGCAGTCACAGGGAACCTGGTTCAAGGGGTTCTACCGGGATTAG
Upstream 100 bases:
>100_bases CCCGGCCCTCGGCGCAGGCCGGGCTGCGTGAACCTGCGGCCGACCCGCACGCGTCTCATGGTCGGAGACACGACGGAGGG GAGGGCTTCTGCAGGTGTAC
Downstream 100 bases:
>100_bases CGGGGGCGCCCCGGGAAGCGGTTTCCCGGGGCGCCGTTGATGGTCCGGGGGCCTCCCCGGTTGGGCCGTGGCTCTGTGGC TGGGGGATCTGTTCTCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSDPFFGGGAFRLFDIMFVLVPILVIGGFVFVFGSMIYTAVSNIQKPLLTRRARVVAKRVRHSTHHHHHGDHHHHSHHTA YYVTFEFEDGRREEFSVRGDQYGLLVEGDEGTLQSQGTWFKGFYRD
Sequences:
>Translated_126_residues MSDPFFGGGAFRLFDIMFVLVPILVIGGFVFVFGSMIYTAVSNIQKPLLTRRARVVAKRVRHSTHHHHHGDHHHHSHHTA YYVTFEFEDGRREEFSVRGDQYGLLVEGDEGTLQSQGTWFKGFYRD >Mature_125_residues SDPFFGGGAFRLFDIMFVLVPILVIGGFVFVFGSMIYTAVSNIQKPLLTRRARVVAKRVRHSTHHHHHGDHHHHSHHTAY YVTFEFEDGRREEFSVRGDQYGLLVEGDEGTLQSQGTWFKGFYRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14550; Mature: 14418
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPFFGGGAFRLFDIMFVLVPILVIGGFVFVFGSMIYTAVSNIQKPLLTRRARVVAKRV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHSTHHHHHGDHHHHSHHTAYYVTFEFEDGRREEFSVRGDQYGLLVEGDEGTLQSQGTWF HHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCEE KGFYRD CCCCCC >Mature Secondary Structure SDPFFGGGAFRLFDIMFVLVPILVIGGFVFVFGSMIYTAVSNIQKPLLTRRARVVAKRV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHSTHHHHHGDHHHHSHHTAYYVTFEFEDGRREEFSVRGDQYGLLVEGDEGTLQSQGTWF HHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCEE KGFYRD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA