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The map label for this gene is ybgL [C]

Identifier: 51893660

GI number: 51893660

Start: 2707712

End: 2708497

Strand: Reverse

Name: ybgL [C]

Synonym: STH2522

Alternate gene names: 51893660

Gene position: 2708497-2707712 (Counterclockwise)

Preceding gene: 51893661

Following gene: 51893659

Centisome position: 75.95

GC content: 72.14

Gene sequence:

>786_bases
GTGGGCGCGATCCGGGGCCCGGTCAGGAAGATCGACCTGAACTGCGACATGGGCGAATCGTTTGGGGTGTACCGAATCGG
GGCGGACGAGGAGATCATGCCCCTGATCACCTCGGCCAACATCGCCTGCGGCTTCCACGGAGGCGATCCGCAGGTCATGC
GCCGGACCGTACGGCTGGCCCGGGAACACGGGGTGGCCGTGGGGGCTCACCCCGGCTATCGGGATCTGGTCGGCTTCTGG
CGACGACCCGTGAGGTGCAGTCCGGACGAGGTGTACGCGGATGTGCTCTACCAGATCGGGGCCCTCGCCGCCTTCTGCCG
GGCGGAAGGGGTGGCCCTACGCCACGTGAAGCCGCACGGGGCGCTGTACAACACCGCAGCCGCGGACGCGGCCATCGCGG
GGGCCGTCGCCCGCGCTGTGGCGGACTTCGACCGGTCGCTGATGCTCTACGCCCCGCCCGGGTCGGCCCTGGAGCAGGCC
GGCCTTGCCGCCGGGCTCCGGGTGATCCGGGAGGGATTCGCGGATCGGGGTTACGCCGCGGACGGGACCTTGTTACCCCG
GACGCACCCAGGGGCGGTGCTGCACGAGCCTGAGCGGGCCGCGGCTCAGGCTCGCGGGATGGTGTGTTCGGGCACGGTCA
CGGCGGACACGGGCGAGGAGGTGGCGGTGCCGGCGGAGACGCTCTGCGTGCACGGGGACCACCCCAGCGTGATCCAGGTG
CTGCGGCGCATCCGGTCGGAGCTGGAGGCGGCGGGCGTCTCCGTGGGTGCGCCTGGAGCGGACTGA

Upstream 100 bases:

>100_bases
TCTGTTCTCCACCGCAGAGGGGCCGGCGCAGCGGCGAGACCCGGCGTTGCGGGGAACGGAGCGGATTCGGGAGGATCAGT
CGCACGGGGAGGGAAACAGC

Downstream 100 bases:

>100_bases
GGCGGCGATTTCGGCGGAACAGGCGCCCTTTCGCGCAGCAGCATGGCTCTCGGAGGCGTGACCGGTGCGCCGCACCGCCG
TAGTGGGGAGAAGCGTGCGA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGAIRGPVRKIDLNCDMGESFGVYRIGADEEIMPLITSANIACGFHGGDPQVMRRTVRLAREHGVAVGAHPGYRDLVGFW
RRPVRCSPDEVYADVLYQIGALAAFCRAEGVALRHVKPHGALYNTAAADAAIAGAVARAVADFDRSLMLYAPPGSALEQA
GLAAGLRVIREGFADRGYAADGTLLPRTHPGAVLHEPERAAAQARGMVCSGTVTADTGEEVAVPAETLCVHGDHPSVIQV
LRRIRSELEAAGVSVGAPGAD

Sequences:

>Translated_261_residues
MGAIRGPVRKIDLNCDMGESFGVYRIGADEEIMPLITSANIACGFHGGDPQVMRRTVRLAREHGVAVGAHPGYRDLVGFW
RRPVRCSPDEVYADVLYQIGALAAFCRAEGVALRHVKPHGALYNTAAADAAIAGAVARAVADFDRSLMLYAPPGSALEQA
GLAAGLRVIREGFADRGYAADGTLLPRTHPGAVLHEPERAAAQARGMVCSGTVTADTGEEVAVPAETLCVHGDHPSVIQV
LRRIRSELEAAGVSVGAPGAD
>Mature_260_residues
GAIRGPVRKIDLNCDMGESFGVYRIGADEEIMPLITSANIACGFHGGDPQVMRRTVRLAREHGVAVGAHPGYRDLVGFWR
RPVRCSPDEVYADVLYQIGALAAFCRAEGVALRHVKPHGALYNTAAADAAIAGAVARAVADFDRSLMLYAPPGSALEQAG
LAAGLRVIREGFADRGYAADGTLLPRTHPGAVLHEPERAAAQARGMVCSGTVTADTGEEVAVPAETLCVHGDHPSVIQVL
RRIRSELEAAGVSVGAPGAD

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=48.7903225806452, Blast_Score=224, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2522_SYMTH (Q67LD9)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_076351.1
- ProteinModelPortal:   Q67LD9
- SMR:   Q67LD9
- GeneID:   2981891
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH2522
- NMPDR:   fig|292459.1.peg.2413
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- BioCyc:   STHE292459:STH2522-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 27383; Mature: 27252

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAIRGPVRKIDLNCDMGESFGVYRIGADEEIMPLITSANIACGFHGGDPQVMRRTVRLA
CCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHHEECCCEEEEECCCCHHHHHHHHHHH
REHGVAVGAHPGYRDLVGFWRRPVRCSPDEVYADVLYQIGALAAFCRAEGVALRHVKPHG
HHCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
ALYNTAAADAAIAGAVARAVADFDRSLMLYAPPGSALEQAGLAAGLRVIREGFADRGYAA
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DGTLLPRTHPGAVLHEPERAAAQARGMVCSGTVTADTGEEVAVPAETLCVHGDHPSVIQV
CCEECCCCCCCCCEECCHHHHHHHCCEEEECEEECCCCCCEECCHHHEEEECCCHHHHHH
LRRIRSELEAAGVSVGAPGAD
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GAIRGPVRKIDLNCDMGESFGVYRIGADEEIMPLITSANIACGFHGGDPQVMRRTVRLA
CCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHHEECCCEEEEECCCCHHHHHHHHHHH
REHGVAVGAHPGYRDLVGFWRRPVRCSPDEVYADVLYQIGALAAFCRAEGVALRHVKPHG
HHCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
ALYNTAAADAAIAGAVARAVADFDRSLMLYAPPGSALEQAGLAAGLRVIREGFADRGYAA
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC
DGTLLPRTHPGAVLHEPERAAAQARGMVCSGTVTADTGEEVAVPAETLCVHGDHPSVIQV
CCEECCCCCCCCCEECCHHHHHHHCCEEEECEEECCCCCCEECCHHHEEEECCCHHHHHH
LRRIRSELEAAGVSVGAPGAD
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA