Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893632

Identifier: 51893632

GI number: 51893632

Start: 2676244

End: 2677218

Strand: Reverse

Name: 51893632

Synonym: STH2494

Alternate gene names: NA

Gene position: 2677218-2676244 (Counterclockwise)

Preceding gene: 51893633

Following gene: 51893631

Centisome position: 75.07

GC content: 73.64

Gene sequence:

>975_bases
ATGTGGCCCAGGACAGTTGACTGGGAAGAGCTCCGGTTCGGGGTCGAGATCGAGTTCGTGGGCGGCAACCCGGCGGCCGT
GGAACTCCTCCCGGGCTGGGTGATGGCCTTCGATGAGCTGCAGGTGGACGATACGGGCGAGGATTCGGGGGCGGAGCTGA
AGCCGCCGCCCCTGCTCTGGCGCGACCGGGAGCAGATGCGGGTGATGCTGGACCGGCTGAAGGCCACGGGTGCCCGGGCC
AACTGGAGCTGCGGGCTGCACGTGCACGTGGGGCTGGAGCCGTGGGGGCAGGACATCGTGCTCCCGCTGGTCGACGAGGC
CCTCGCGCACCAGGACGCCCTGCGCGGGCTCCTGCGGACGGCCGAGGACCGGCTGATTCACTGCCCGCCCGTGGTGCCTG
CTATGCGGGACCGCTACCTGGCGAAACCGGAGCGGGCCTCCCTGGTCCGCCGGGGACGGCCGCAGTCGCACCGCTGCGGC
ATCAATGCGGCGGCCTGGTTCGACTTCGGAACGGTGGAGATCCGCTATCCCAACGGCTCGCTGGAGTACGACGAGGTCGT
GAACACGGTGGAGCTCTGCCTGCGGTTCGTGGCCGCTGTGGGCGCGGGGCGGTTGGTGCCCCCGGCTGCGGCGGGCGCAA
CGGGCGGGGGAGCGGCCGCGTCGGGTCCGGCTGCGTCCGCGGCGGATGCGGCTGCGCTGGCCGCCTTGCTGGGCGCTCCG
GCGGACGGCTACCCGCTGCCGCGGCCGGCGCCGCGGTGGCACCGGGAGCGGGCATGGCTGGAAGACGCCCTGGTCCCCGT
GCTGGAGCCGCTGGTGCGGTCCCGGGTGCCCGAGGCGGAAATCCTGGCCATCCGGCCGGTCCCCGGGGGCTTCCGGGTCA
CGGCGGAGGAGCCCGGAGACCGCCGCATGGCCTTTCTCACGCGGCCCGGCCCGGACGGGTGGTCGCTGGAACCGTTGGAG
TCGGAGCGGGGATAG

Upstream 100 bases:

>100_bases
GGCGGTGCTGTCCACGGGGGCGGCCAGGACGTGTCGACCGGGGGAAACCACGCGGATTCGTAGCGACGTCTGTAAGACGG
GAAGAGGAGAGGTGACCCCC

Downstream 100 bases:

>100_bases
GCCCCGCTCCTGCGCGAGGGGGGAGCGACGTGGGGAGTTCTACCTGATTCGGTACTGTGAAGCATCCGGACAGGCGGCAG
ACGCGCCGCTGACCGAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MWPRTVDWEELRFGVEIEFVGGNPAAVELLPGWVMAFDELQVDDTGEDSGAELKPPPLLWRDREQMRVMLDRLKATGARA
NWSCGLHVHVGLEPWGQDIVLPLVDEALAHQDALRGLLRTAEDRLIHCPPVVPAMRDRYLAKPERASLVRRGRPQSHRCG
INAAAWFDFGTVEIRYPNGSLEYDEVVNTVELCLRFVAAVGAGRLVPPAAAGATGGGAAASGPAASAADAAALAALLGAP
ADGYPLPRPAPRWHRERAWLEDALVPVLEPLVRSRVPEAEILAIRPVPGGFRVTAEEPGDRRMAFLTRPGPDGWSLEPLE
SERG

Sequences:

>Translated_324_residues
MWPRTVDWEELRFGVEIEFVGGNPAAVELLPGWVMAFDELQVDDTGEDSGAELKPPPLLWRDREQMRVMLDRLKATGARA
NWSCGLHVHVGLEPWGQDIVLPLVDEALAHQDALRGLLRTAEDRLIHCPPVVPAMRDRYLAKPERASLVRRGRPQSHRCG
INAAAWFDFGTVEIRYPNGSLEYDEVVNTVELCLRFVAAVGAGRLVPPAAAGATGGGAAASGPAASAADAAALAALLGAP
ADGYPLPRPAPRWHRERAWLEDALVPVLEPLVRSRVPEAEILAIRPVPGGFRVTAEEPGDRRMAFLTRPGPDGWSLEPLE
SERG
>Mature_324_residues
MWPRTVDWEELRFGVEIEFVGGNPAAVELLPGWVMAFDELQVDDTGEDSGAELKPPPLLWRDREQMRVMLDRLKATGARA
NWSCGLHVHVGLEPWGQDIVLPLVDEALAHQDALRGLLRTAEDRLIHCPPVVPAMRDRYLAKPERASLVRRGRPQSHRCG
INAAAWFDFGTVEIRYPNGSLEYDEVVNTVELCLRFVAAVGAGRLVPPAAAGATGGGAAASGPAASAADAAALAALLGAP
ADGYPLPRPAPRWHRERAWLEDALVPVLEPLVRSRVPEAEILAIRPVPGGFRVTAEEPGDRRMAFLTRPGPDGWSLEPLE
SERG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35244; Mature: 35244

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWPRTVDWEELRFGVEIEFVGGNPAAVELLPGWVMAFDELQVDDTGEDSGAELKPPPLLW
CCCCCCCHHHHEECEEEEEECCCCCEEEECCHHHHHHHHEECCCCCCCCCCCCCCCCCCC
RDREQMRVMLDRLKATGARANWSCGLHVHVGLEPWGQDIVLPLVDEALAHQDALRGLLRT
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
AEDRLIHCPPVVPAMRDRYLAKPERASLVRRGRPQSHRCGINAAAWFDFGTVEIRYPNGS
HHCCEEECCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCC
LEYDEVVNTVELCLRFVAAVGAGRLVPPAAAGATGGGAAASGPAASAADAAALAALLGAP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
ADGYPLPRPAPRWHRERAWLEDALVPVLEPLVRSRVPEAEILAIRPVPGGFRVTAEEPGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCC
RRMAFLTRPGPDGWSLEPLESERG
CEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWPRTVDWEELRFGVEIEFVGGNPAAVELLPGWVMAFDELQVDDTGEDSGAELKPPPLLW
CCCCCCCHHHHEECEEEEEECCCCCEEEECCHHHHHHHHEECCCCCCCCCCCCCCCCCCC
RDREQMRVMLDRLKATGARANWSCGLHVHVGLEPWGQDIVLPLVDEALAHQDALRGLLRT
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
AEDRLIHCPPVVPAMRDRYLAKPERASLVRRGRPQSHRCGINAAAWFDFGTVEIRYPNGS
HHCCEEECCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCC
LEYDEVVNTVELCLRFVAAVGAGRLVPPAAAGATGGGAAASGPAASAADAAALAALLGAP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
ADGYPLPRPAPRWHRERAWLEDALVPVLEPLVRSRVPEAEILAIRPVPGGFRVTAEEPGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCC
RRMAFLTRPGPDGWSLEPLESERG
CEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA