Click here to switch to the map view.

The map label for this gene is cdaR [C]

Identifier: 51893629

GI number: 51893629

Start: 2673267

End: 2674484

Strand: Reverse

Name: cdaR [C]

Synonym: STH2491

Alternate gene names: 51893629

Gene position: 2674484-2673267 (Counterclockwise)

Preceding gene: 51893630

Following gene: 51893628

Centisome position: 75.0

GC content: 70.53

Gene sequence:

>1218_bases
ATGCCGGTGGCCCTGCCGGCGGCCGGCAGCCAGGCCGGGCGGCGTGCGCTGCCCCGATGGTGGGAGGGGATAACTCTGCG
GATTACCAGTGAACTTGCGCAGCCCATCGCAGACCGGGCGGTTACGATTCTGCAGCGGAACGTCAATATCATGGACGAGG
ACGGCGTCATCGTGGCCAGCGGCGACCCGACCCGGATCGGCTCCTTTCACCAGGCGGCGGCGCAGGTGATCCGGACCAAC
CGGCGCCTGGACATCTACCCTGGCGACGAGGAGCGGTGGGTCGGGGTCCGGCCCGGGGTTAACCTGCCCATTCAAGTGGA
CGGCCGCACTGTCGGGGTGGTGGGGATTACGGGTCCGCCCGATCAGGTGGGCCCGTTCGGCGAGCTGATCCGCGAGATGG
TCAGCCTGGCCCTGATGCAGCGGCGGGCGGAGGAGCTGGAGCGGGTCCGGCTGATGGCCCGGGAGTCGTTTCTGCGGACG
CTGCTGACCAGCAAGGGCCCGATCGGCGAGCGGATGGTGCAGGACGCCCCCCTTTACGACCTGTCGCCGGACTCCGCCTA
CCAGGTGCTGCTCTGCCAGGGCCCCCGGGGAACCGACGGGCTCTCCCGTATCTGGGCGGAATCCGAATGGCTCGCGCAGC
GGCTGCAGAGGGGGGGCACCGACCGGATCACCTTCGCCGGTCCCTGGAACGGCCTGGGGGTGGTGATCGCGACCGACCCA
CCCCGGGACCTGAGCGCAGTGCTGCTGGAGGCGCTGCCCAAGGGATTCGCCGTGGCCGGCGGGCTGATCGGCCGGGGGCT
GGTGGGGCTCCGGCGCTCGTACGAGACCGCACTGCAGAGCTTTGCCGCCGGGCGGCTCCACGGCAACCCGGTCGCCCTGT
CGGCCTACCGGCTCCGGCTGTCCCGGTTGCTGACCACCCTCCCGCCGTCCGAGGTCGCCGAGTTCGTGGCCGGGATGCTG
GGGGGGCTGCCGGCGGCCGACAGCCGGGAGGGGCGCCTCCTGCGGGAGACGGTACTGGCTTACGCGGAGGAAGGGTTGAA
CAGCACCGGCGCCGCCGACCGGCTGGGCATCCACCGGCACACCCTGGTCCACCGGTTGGGGGCGATTGCTGAACGCAGCG
GAACCGACCCGCGCTCCTGGGAAGGGCTGTTGTCCCTCTACCTGGCCATCCAGTTGGAGCGGCTGTTTGGACAAAGTGTC
GAGTACGGGCTGCAATAA

Upstream 100 bases:

>100_bases
CGGGCTACGGGCCTGGCTCACCCCCGGCGGCGGAGTCAGTCGGCGTGTTGGGATCCGAACAGCAGGCGCCGCGGGGAGCA
TGGCCCGCGGCGCCTGTCGC

Downstream 100 bases:

>100_bases
TGCGTAGAATTTCGAGCATCGCTGGACGAAGTGGCCACAGGCCGCTTTCCGGCGATGCTCGAATCCTACTTTCGACCGAT
ACCGCTTCGATCGGAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPVALPAAGSQAGRRALPRWWEGITLRITSELAQPIADRAVTILQRNVNIMDEDGVIVASGDPTRIGSFHQAAAQVIRTN
RRLDIYPGDEERWVGVRPGVNLPIQVDGRTVGVVGITGPPDQVGPFGELIREMVSLALMQRRAEELERVRLMARESFLRT
LLTSKGPIGERMVQDAPLYDLSPDSAYQVLLCQGPRGTDGLSRIWAESEWLAQRLQRGGTDRITFAGPWNGLGVVIATDP
PRDLSAVLLEALPKGFAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRLSRLLTTLPPSEVAEFVAGML
GGLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRHTLVHRLGAIAERSGTDPRSWEGLLSLYLAIQLERLFGQSV
EYGLQ

Sequences:

>Translated_405_residues
MPVALPAAGSQAGRRALPRWWEGITLRITSELAQPIADRAVTILQRNVNIMDEDGVIVASGDPTRIGSFHQAAAQVIRTN
RRLDIYPGDEERWVGVRPGVNLPIQVDGRTVGVVGITGPPDQVGPFGELIREMVSLALMQRRAEELERVRLMARESFLRT
LLTSKGPIGERMVQDAPLYDLSPDSAYQVLLCQGPRGTDGLSRIWAESEWLAQRLQRGGTDRITFAGPWNGLGVVIATDP
PRDLSAVLLEALPKGFAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRLSRLLTTLPPSEVAEFVAGML
GGLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRHTLVHRLGAIAERSGTDPRSWEGLLSLYLAIQLERLFGQSV
EYGLQ
>Mature_404_residues
PVALPAAGSQAGRRALPRWWEGITLRITSELAQPIADRAVTILQRNVNIMDEDGVIVASGDPTRIGSFHQAAAQVIRTNR
RLDIYPGDEERWVGVRPGVNLPIQVDGRTVGVVGITGPPDQVGPFGELIREMVSLALMQRRAEELERVRLMARESFLRTL
LTSKGPIGERMVQDAPLYDLSPDSAYQVLLCQGPRGTDGLSRIWAESEWLAQRLQRGGTDRITFAGPWNGLGVVIATDPP
RDLSAVLLEALPKGFAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRLSRLLTTLPPSEVAEFVAGMLG
GLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRHTLVHRLGAIAERSGTDPRSWEGLLSLYLAIQLERLFGQSVE
YGLQ

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=384, Percent_Identity=28.6458333333333, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 43976; Mature: 43845

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVALPAAGSQAGRRALPRWWEGITLRITSELAQPIADRAVTILQRNVNIMDEDGVIVAS
CCCCCCCCCCHHHHHHCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEC
GDPTRIGSFHQAAAQVIRTNRRLDIYPGDEERWVGVRPGVNLPIQVDGRTVGVVGITGPP
CCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEECCEEEEEEEECCCC
DQVGPFGELIREMVSLALMQRRAEELERVRLMARESFLRTLLTSKGPIGERMVQDAPLYD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
LSPDSAYQVLLCQGPRGTDGLSRIWAESEWLAQRLQRGGTDRITFAGPWNGLGVVIATDP
CCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCC
PRDLSAVLLEALPKGFAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
SRLLTTLPPSEVAEFVAGMLGGLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRH
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TLVHRLGAIAERSGTDPRSWEGLLSLYLAIQLERLFGQSVEYGLQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
PVALPAAGSQAGRRALPRWWEGITLRITSELAQPIADRAVTILQRNVNIMDEDGVIVAS
CCCCCCCCCHHHHHHCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEC
GDPTRIGSFHQAAAQVIRTNRRLDIYPGDEERWVGVRPGVNLPIQVDGRTVGVVGITGPP
CCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEECCEEEEEEEECCCC
DQVGPFGELIREMVSLALMQRRAEELERVRLMARESFLRTLLTSKGPIGERMVQDAPLYD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
LSPDSAYQVLLCQGPRGTDGLSRIWAESEWLAQRLQRGGTDRITFAGPWNGLGVVIATDP
CCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCC
PRDLSAVLLEALPKGFAVAGGLIGRGLVGLRRSYETALQSFAAGRLHGNPVALSAYRLRL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
SRLLTTLPPSEVAEFVAGMLGGLPAADSREGRLLRETVLAYAEEGLNSTGAADRLGIHRH
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TLVHRLGAIAERSGTDPRSWEGLLSLYLAIQLERLFGQSVEYGLQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]