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The map label for this gene is ykwD [H]

Identifier: 51893630

GI number: 51893630

Start: 2674618

End: 2675850

Strand: Reverse

Name: ykwD [H]

Synonym: STH2492

Alternate gene names: 51893630

Gene position: 2675850-2674618 (Counterclockwise)

Preceding gene: 51893631

Following gene: 51893629

Centisome position: 75.04

GC content: 70.72

Gene sequence:

>1233_bases
ATGGGTTGCGACCGCCTCTGCAGTTATGGTAACTTGACGGTGTGTAGCCAGAAACTTACACACTTCGATCGACTAGGAGG
AGCACCCGTGTCGCAGCGCCCGTTTCCGCACCATCTCGCCGCCCTCGCCATCGCCGCGACACTGTTGGGGATTCTGCCGG
TCTCCGCCTCCGGGCTGCGCGCCATCCTGCCGGGCGCCGTTGCGCCGGGCCGGGTCCTGCCCGGCGCCGCCCCAGCCCTG
GCGGCTCCGGCCGCGTACACCGATCAGGCGCAGATCCCCGCCTGGGCCGCGGCGGACATCGAGTTCACCACCGAGCTGGG
CATCTTCCGGGGCGATGCGGACACCGGCGCCTTCCGGCCCCACGACCAGATCACCCGGGCCGAGGTGGCTGCTGTCGTCC
TGCGCGCTTTCCCGCTGGCTGCCGACCCCGCGGTGCGGGCGCCCTTCGTGGACATCCATGGCGGCTGGTACGAGGAGCCG
GTCACCCGGGCCGTCCAGGCGGGCGTGATCCAGGCCGGGGACTTCGGCCCCTGGTTCCGGCCGAACCAGCCGATCACGCG
GGCCGAGCTGGCCCGGATGCTGGCCCGTGCAATCGGGGTCTGCCACGTCAGCCCCTCGTCGGTGGCGTTCTCCGACGTGG
ATCCGAACCAGGCTCCGTTCGGGCCGTACATCGCCAGGGCGGCGGGCTGTGGCATCATCCGGGGGATGGGGGACGGCACG
TTTGCACCGGACCAGACGGCGACCCGGGCGCAGGCCGCGGTGATGATCGCCCGGGCGCTGCGCCTGACGCAGGCAGGGTC
AGCCCCGCCACAACCGGCGGAACCCGCGCCGGCCGGCGGACCTTCGGCTGAGGACGGGATTCACGAGTTCGAGCGGCGGG
TGGCGGAGCTGGTTAACGCCGAGCGCCTGGCGGCGGGACTGCAGCCCCTCCGTCTGGATCCCGGGCTGAGCCGGGTCGCC
CGGCTGAAGTCCCGGGACTTCGTCACCGGCGGGTACTTCGGCCACGAGAGCCCCACCTACGGGAGCCCCTTCGAGATGAT
GAAACAGTTCGGGTTCACGTACCGGATGGCCGGGGAGAACATCGCGCTGGGCCACCGGACCCCGGAGCAGGTGCACGAGG
CCTGGATGAACAGCCCGGGGCACCGCAGCAACATCCTGAACCCGGACTTCGACACCATCGGCGTCGGCTACTACGAGTAC
GGCTGGACGCAGATGTTCATCCAGAGCCGGTGA

Upstream 100 bases:

>100_bases
GACCACGCCCGATGTCTACCGGGCGACCAGGCGCGATGCGGCATGGCGGGTGGATCGGGTGGGGACGGACGCGTAGCGGG
CGGCGCCGGAAACCCGACCC

Downstream 100 bases:

>100_bases
AGGGTTGGTGCGGCAGCGGCACGGCGCTGGGATCGGGCTACGGGCCTGGCTCACCCCCGGCGGCGGAGTCAGTCGGCGTG
TTGGGATCCGAACAGCAGGC

Product: putative S-layer associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGCDRLCSYGNLTVCSQKLTHFDRLGGAPVSQRPFPHHLAALAIAATLLGILPVSASGLRAILPGAVAPGRVLPGAAPAL
AAPAAYTDQAQIPAWAAADIEFTTELGIFRGDADTGAFRPHDQITRAEVAAVVLRAFPLAADPAVRAPFVDIHGGWYEEP
VTRAVQAGVIQAGDFGPWFRPNQPITRAELARMLARAIGVCHVSPSSVAFSDVDPNQAPFGPYIARAAGCGIIRGMGDGT
FAPDQTATRAQAAVMIARALRLTQAGSAPPQPAEPAPAGGPSAEDGIHEFERRVAELVNAERLAAGLQPLRLDPGLSRVA
RLKSRDFVTGGYFGHESPTYGSPFEMMKQFGFTYRMAGENIALGHRTPEQVHEAWMNSPGHRSNILNPDFDTIGVGYYEY
GWTQMFIQSR

Sequences:

>Translated_410_residues
MGCDRLCSYGNLTVCSQKLTHFDRLGGAPVSQRPFPHHLAALAIAATLLGILPVSASGLRAILPGAVAPGRVLPGAAPAL
AAPAAYTDQAQIPAWAAADIEFTTELGIFRGDADTGAFRPHDQITRAEVAAVVLRAFPLAADPAVRAPFVDIHGGWYEEP
VTRAVQAGVIQAGDFGPWFRPNQPITRAELARMLARAIGVCHVSPSSVAFSDVDPNQAPFGPYIARAAGCGIIRGMGDGT
FAPDQTATRAQAAVMIARALRLTQAGSAPPQPAEPAPAGGPSAEDGIHEFERRVAELVNAERLAAGLQPLRLDPGLSRVA
RLKSRDFVTGGYFGHESPTYGSPFEMMKQFGFTYRMAGENIALGHRTPEQVHEAWMNSPGHRSNILNPDFDTIGVGYYEY
GWTQMFIQSR
>Mature_409_residues
GCDRLCSYGNLTVCSQKLTHFDRLGGAPVSQRPFPHHLAALAIAATLLGILPVSASGLRAILPGAVAPGRVLPGAAPALA
APAAYTDQAQIPAWAAADIEFTTELGIFRGDADTGAFRPHDQITRAEVAAVVLRAFPLAADPAVRAPFVDIHGGWYEEPV
TRAVQAGVIQAGDFGPWFRPNQPITRAELARMLARAIGVCHVSPSSVAFSDVDPNQAPFGPYIARAAGCGIIRGMGDGTF
APDQTATRAQAAVMIARALRLTQAGSAPPQPAEPAPAGGPSAEDGIHEFERRVAELVNAERLAAGLQPLRLDPGLSRVAR
LKSRDFVTGGYFGHESPTYGSPFEMMKQFGFTYRMAGENIALGHRTPEQVHEAWMNSPGHRSNILNPDFDTIGVGYYEYG
WTQMFIQSR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 43655; Mature: 43524

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCDRLCSYGNLTVCSQKLTHFDRLGGAPVSQRPFPHHLAALAIAATLLGILPVSASGLR
CCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
AILPGAVAPGRVLPGAAPALAAPAAYTDQAQIPAWAAADIEFTTELGIFRGDADTGAFRP
HHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCEEEEHHCCEEECCCCCCCCCC
HDQITRAEVAAVVLRAFPLAADPAVRAPFVDIHGGWYEEPVTRAVQAGVIQAGDFGPWFR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCEECCCCCCCCC
PNQPITRAELARMLARAIGVCHVSPSSVAFSDVDPNQAPFGPYIARAAGCGIIRGMGDGT
CCCCCCHHHHHHHHHHHHHEEECCCCCCEECCCCCCCCCCCHHHHHHHCCCEEECCCCCC
FAPDQTATRAQAAVMIARALRLTQAGSAPPQPAEPAPAGGPSAEDGIHEFERRVAELVNA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERLAAGLQPLRLDPGLSRVARLKSRDFVTGGYFGHESPTYGSPFEMMKQFGFTYRMAGEN
HHHHHCCCCEECCCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEECCCE
IALGHRTPEQVHEAWMNSPGHRSNILNPDFDTIGVGYYEYGWTQMFIQSR
EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHCCEEEEEECC
>Mature Secondary Structure 
GCDRLCSYGNLTVCSQKLTHFDRLGGAPVSQRPFPHHLAALAIAATLLGILPVSASGLR
CHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
AILPGAVAPGRVLPGAAPALAAPAAYTDQAQIPAWAAADIEFTTELGIFRGDADTGAFRP
HHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCEEEEHHCCEEECCCCCCCCCC
HDQITRAEVAAVVLRAFPLAADPAVRAPFVDIHGGWYEEPVTRAVQAGVIQAGDFGPWFR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCEECCCCCCCCC
PNQPITRAELARMLARAIGVCHVSPSSVAFSDVDPNQAPFGPYIARAAGCGIIRGMGDGT
CCCCCCHHHHHHHHHHHHHEEECCCCCCEECCCCCCCCCCCHHHHHHHCCCEEECCCCCC
FAPDQTATRAQAAVMIARALRLTQAGSAPPQPAEPAPAGGPSAEDGIHEFERRVAELVNA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERLAAGLQPLRLDPGLSRVARLKSRDFVTGGYFGHESPTYGSPFEMMKQFGFTYRMAGEN
HHHHHCCCCEECCCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEECCCE
IALGHRTPEQVHEAWMNSPGHRSNILNPDFDTIGVGYYEYGWTQMFIQSR
EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]