Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is glxK [H]

Identifier: 51893628

GI number: 51893628

Start: 2672017

End: 2673162

Strand: Reverse

Name: glxK [H]

Synonym: STH2490

Alternate gene names: 51893628

Gene position: 2673162-2672017 (Counterclockwise)

Preceding gene: 51893629

Following gene: 51893627

Centisome position: 74.96

GC content: 72.86

Gene sequence:

>1146_bases
ATGAAGATCATCGTGGCGCCGGACTCCTTCAAGGGAAGCCTGACCGCCCTGAAGGCTGCGGAAGCCATGCGGCAGGGCGT
GCTGGACGCCATGCCCGACGCCGAGGTGGTGGCGCTGCCGATGGCCGATGGCGGGGAAGGTACCACCCAGGCGCTGGTGG
CGGCCACTGGCGGTCAGCTGGTGGAAGCGGAGGTGACAGGCCCGCTGGGCGAACCGGTACGGGCCGCTTTTGGCCTGCTG
GGCGACGGCGACACCGCCGTCATCGAGATGGCGGCCGCTTCCGGGCTGCTGTTGGTGCCGCCGGAGCGCAGGGATCCCAA
GGTGACCACCACCTATGGCACCGGTGAACTGATCCGGGCGGCCCTGGACCGGGGCGTGCGCCGGATCCTGGTCGGCATCG
GCGGCAGCGCCACCAACGACGGCGGCGTAGGCATGGCCCAGGCCCTGGGCGGCCGTTTCCTGAAGGCGGACGGCAGCCCG
GTGGATCGGGGCGGCGCGGCCCTGTTGGAGTTGGAGCGGATCGACCTGAGCGGCCTGGACCCCCGGCTGAAGGGCGTGGA
GCTGATGGTGGCCTGTGACGTGGACAATCCGCTGACCGGTCCGCGCGGCGCGGCGGCGGTCTACGGCCCGCAGAAGGGGG
CCACGGCGGAGGACGTGGCGCTGCTGGACCGGGCGCTTACCCGGCTGGCCGACGTGATGGTCCGGGACCTGGGCCGGGAT
GTCCGGAACCTGCCGGGCGCAGGAGCCGCCGGTGGGCTCGGGGCCGGGCTCATGGGATTCCTGGGCGCACGGCTCCGTCC
GGGAATTGATGTGGTGATGGAGGTCACCGGGCTTCGGCGACAGTTGCAGGGCGCGGCGCTGCTCCTCACCGGCGAGGGCA
GGACCGACGGCCAGACCCTGGCGGGCAAGGTGCCGCTGGGCCTGGCGCGGGCGGCGGCGCCCTGCGGCGTGCCGGTGGTC
GTGATCTCGGGCGCGGTGACCGACGATGCCGACGCCCTGCTGGAGCAGGGGGTCGCGGCGCTGCTCAGTACTGCCCCGGG
GCCGGTGACGCTGGATGAGGCCATGGCTCGGGCCGACCAGTGGCTGCGGCGGGCAACCGCCCAGGCTATGCGGCTGGTCC
GGGTTGGCATACAGGTTCCCCGTTAG

Upstream 100 bases:

>100_bases
TAGAATTTCGAGCATCGCTGGACGAAGTGGCCACAGGCCGCTTTCCGGCGATGCTCGAATCCTACTTTCGACCGATACCG
CTTCGATCGGAGGAATGAAG

Downstream 100 bases:

>100_bases
ACCTTCGGAGAAAGATGGAGGAATGAGTGATGGCATCAGGCCCGATTCTTCTTGTCATCCTGTTGGCCGCGATCGCATTC
ATCATCTATAGTACCGCCAA

Product: glycerate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQLVEAEVTGPLGEPVRAAFGLL
GDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRAALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSP
VDRGGAALLELERIDLSGLDPRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD
VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTLAGKVPLGLARAAAPCGVPVV
VISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQWLRRATAQAMRLVRVGIQVPR

Sequences:

>Translated_381_residues
MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQLVEAEVTGPLGEPVRAAFGLL
GDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRAALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSP
VDRGGAALLELERIDLSGLDPRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD
VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTLAGKVPLGLARAAAPCGVPVV
VISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQWLRRATAQAMRLVRVGIQVPR
>Mature_381_residues
MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQLVEAEVTGPLGEPVRAAFGLL
GDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRAALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSP
VDRGGAALLELERIDLSGLDPRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD
VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTLAGKVPLGLARAAAPCGVPVV
VISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQWLRRATAQAMRLVRVGIQVPR

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=378, Percent_Identity=50, Blast_Score=342, Evalue=3e-95,
Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=50, Blast_Score=339, Evalue=2e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 38614; Mature: 38614

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQL
CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHEEEEECCCEE
VEAEVTGPLGEPVRAAFGLLGDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRA
EEEEECCCCCCHHHHHHHCCCCCCHHEEEEHHCCCEEEECCCCCCCEEEEECCCHHHHHH
ALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSPVDRGGAALLELERIDLSGLD
HHHHHHHEEEHCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCEEEEEEECCCCCCC
PRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD
CCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTL
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE
AGKVPLGLARAAAPCGVPVVVISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQ
ECCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
WLRRATAQAMRLVRVGIQVPR
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQL
CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHEEEEECCCEE
VEAEVTGPLGEPVRAAFGLLGDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRA
EEEEECCCCCCHHHHHHHCCCCCCHHEEEEHHCCCEEEECCCCCCCEEEEECCCHHHHHH
ALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSPVDRGGAALLELERIDLSGLD
HHHHHHHEEEHCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCEEEEEEECCCCCCC
PRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD
CCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTL
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE
AGKVPLGLARAAAPCGVPVVVISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQ
ECCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
WLRRATAQAMRLVRVGIQVPR
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 3020045 [H]