| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is glxK [H]
Identifier: 51893628
GI number: 51893628
Start: 2672017
End: 2673162
Strand: Reverse
Name: glxK [H]
Synonym: STH2490
Alternate gene names: 51893628
Gene position: 2673162-2672017 (Counterclockwise)
Preceding gene: 51893629
Following gene: 51893627
Centisome position: 74.96
GC content: 72.86
Gene sequence:
>1146_bases ATGAAGATCATCGTGGCGCCGGACTCCTTCAAGGGAAGCCTGACCGCCCTGAAGGCTGCGGAAGCCATGCGGCAGGGCGT GCTGGACGCCATGCCCGACGCCGAGGTGGTGGCGCTGCCGATGGCCGATGGCGGGGAAGGTACCACCCAGGCGCTGGTGG CGGCCACTGGCGGTCAGCTGGTGGAAGCGGAGGTGACAGGCCCGCTGGGCGAACCGGTACGGGCCGCTTTTGGCCTGCTG GGCGACGGCGACACCGCCGTCATCGAGATGGCGGCCGCTTCCGGGCTGCTGTTGGTGCCGCCGGAGCGCAGGGATCCCAA GGTGACCACCACCTATGGCACCGGTGAACTGATCCGGGCGGCCCTGGACCGGGGCGTGCGCCGGATCCTGGTCGGCATCG GCGGCAGCGCCACCAACGACGGCGGCGTAGGCATGGCCCAGGCCCTGGGCGGCCGTTTCCTGAAGGCGGACGGCAGCCCG GTGGATCGGGGCGGCGCGGCCCTGTTGGAGTTGGAGCGGATCGACCTGAGCGGCCTGGACCCCCGGCTGAAGGGCGTGGA GCTGATGGTGGCCTGTGACGTGGACAATCCGCTGACCGGTCCGCGCGGCGCGGCGGCGGTCTACGGCCCGCAGAAGGGGG CCACGGCGGAGGACGTGGCGCTGCTGGACCGGGCGCTTACCCGGCTGGCCGACGTGATGGTCCGGGACCTGGGCCGGGAT GTCCGGAACCTGCCGGGCGCAGGAGCCGCCGGTGGGCTCGGGGCCGGGCTCATGGGATTCCTGGGCGCACGGCTCCGTCC GGGAATTGATGTGGTGATGGAGGTCACCGGGCTTCGGCGACAGTTGCAGGGCGCGGCGCTGCTCCTCACCGGCGAGGGCA GGACCGACGGCCAGACCCTGGCGGGCAAGGTGCCGCTGGGCCTGGCGCGGGCGGCGGCGCCCTGCGGCGTGCCGGTGGTC GTGATCTCGGGCGCGGTGACCGACGATGCCGACGCCCTGCTGGAGCAGGGGGTCGCGGCGCTGCTCAGTACTGCCCCGGG GCCGGTGACGCTGGATGAGGCCATGGCTCGGGCCGACCAGTGGCTGCGGCGGGCAACCGCCCAGGCTATGCGGCTGGTCC GGGTTGGCATACAGGTTCCCCGTTAG
Upstream 100 bases:
>100_bases TAGAATTTCGAGCATCGCTGGACGAAGTGGCCACAGGCCGCTTTCCGGCGATGCTCGAATCCTACTTTCGACCGATACCG CTTCGATCGGAGGAATGAAG
Downstream 100 bases:
>100_bases ACCTTCGGAGAAAGATGGAGGAATGAGTGATGGCATCAGGCCCGATTCTTCTTGTCATCCTGTTGGCCGCGATCGCATTC ATCATCTATAGTACCGCCAA
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQLVEAEVTGPLGEPVRAAFGLL GDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRAALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSP VDRGGAALLELERIDLSGLDPRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTLAGKVPLGLARAAAPCGVPVV VISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQWLRRATAQAMRLVRVGIQVPR
Sequences:
>Translated_381_residues MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQLVEAEVTGPLGEPVRAAFGLL GDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRAALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSP VDRGGAALLELERIDLSGLDPRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTLAGKVPLGLARAAAPCGVPVV VISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQWLRRATAQAMRLVRVGIQVPR >Mature_381_residues MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQLVEAEVTGPLGEPVRAAFGLL GDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRAALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSP VDRGGAALLELERIDLSGLDPRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTLAGKVPLGLARAAAPCGVPVV VISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQWLRRATAQAMRLVRVGIQVPR
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=378, Percent_Identity=50, Blast_Score=342, Evalue=3e-95, Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=50, Blast_Score=339, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 38614; Mature: 38614
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQL CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHEEEEECCCEE VEAEVTGPLGEPVRAAFGLLGDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRA EEEEECCCCCCHHHHHHHCCCCCCHHEEEEHHCCCEEEECCCCCCCEEEEECCCHHHHHH ALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSPVDRGGAALLELERIDLSGLD HHHHHHHEEEHCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCEEEEEEECCCCCCC PRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD CCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTL HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE AGKVPLGLARAAAPCGVPVVVISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQ ECCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH WLRRATAQAMRLVRVGIQVPR HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIIVAPDSFKGSLTALKAAEAMRQGVLDAMPDAEVVALPMADGGEGTTQALVAATGGQL CEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHEEEEECCCEE VEAEVTGPLGEPVRAAFGLLGDGDTAVIEMAAASGLLLVPPERRDPKVTTTYGTGELIRA EEEEECCCCCCHHHHHHHCCCCCCHHEEEEHHCCCEEEECCCCCCCEEEEECCCHHHHHH ALDRGVRRILVGIGGSATNDGGVGMAQALGGRFLKADGSPVDRGGAALLELERIDLSGLD HHHHHHHEEEHCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCEEEEEEECCCCCCC PRLKGVELMVACDVDNPLTGPRGAAAVYGPQKGATAEDVALLDRALTRLADVMVRDLGRD CCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRNLPGAGAAGGLGAGLMGFLGARLRPGIDVVMEVTGLRRQLQGAALLLTGEGRTDGQTL HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE AGKVPLGLARAAAPCGVPVVVISGAVTDDADALLEQGVAALLSTAPGPVTLDEAMARADQ ECCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH WLRRATAQAMRLVRVGIQVPR HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]